|
2018 Journal Article Target-enrichment sequencing for detailed characterization of small RNAsNguyen, Quan, Aguado, Julio, Iannelli, Fabio, Suzuki, Ana Maria, Rossiello, Francesca, D'Adda Di Fagagna, Fabrizio and Carninci, Piero (2018). Target-enrichment sequencing for detailed characterization of small RNAs. Nature Protocols, 13 (4), 768-786. doi: 10.1038/nprot.2018.001 |
|
2018 Journal Article Mammalian genomic regulatory regions predicted by utilizing human genomics, transcriptomics, and epigenetics dataNguyen, Quan H., Tellam, Ross L., Naval-Sanchez, Marina, Porto-Neto, Laercio R., Barendse, William, Reverter, Antonio, Hayes, Benjamin, Kijas, James and Dalrymple, Brian P. (2018). Mammalian genomic regulatory regions predicted by utilizing human genomics, transcriptomics, and epigenetics data. Gigascience, 7 (3), 1-17. doi: 10.1093/gigascience/gix136 |
|
2018 Journal Article Single cell RNA sequencing of stem cell-derived retinal ganglion cellsDaniszewski, Maciej, Senabouth, Anne, Nguyen, Quan H., Crombie, Duncan E., Lukowski, Samuel W., Kulkarni, Tejal, Sluch, Valentin M., Jabbari, Jafar S., Chamling, Xitiz, Zack, Donald J., Pébay, Alice, Powell, Joseph E. and Hewitt, Alex W. (2018). Single cell RNA sequencing of stem cell-derived retinal ganglion cells. Scientific Data, 5 (1) 180013, 1-9. doi: 10.1038/sdata.2018.13 |
|
2018 Journal Article Sheep genome functional annotation reveals proximal regulatory elements contributed to the evolution of modern breedsNaval-Sanchez, Marina, Nguyen, Quan, McWilliam, Sean, Porto-Neto, Laercio R., Tellam, Ross, Vuocolo, Tony, Reverter, Antonio, Perez-Enciso, Miguel, Brauning, Rudiger, Clarke, Shannon, McCulloch, Alan, Zamani, Wahid, Naderi, Saeid, Rezaei, Hamid Reza, Pompanon, Francois, Taberlet, Pierre, Worley, Kim C., Gibbs, Richard A., Muzny, Donna M., Jhangiani, Shalini N., Cockett, Noelle, Daetwyler, Hans and Kijas, James (2018). Sheep genome functional annotation reveals proximal regulatory elements contributed to the evolution of modern breeds. Nature Communications, 9 (1) 859. doi: 10.1038/s41467-017-02809-1 |
|
2017 Journal Article A damaged genome's transcriptional landscape through multilayered expression profiling around in situ-mapped DNA double-strand breaksIannelli, Fabio, Galbiati, Alessandro, Capozzo, Ilaria, Nguyen, Quan, Magnuson, Brian, Michelini, Flavia, D'Alessandro, Giuseppina, Cabrini, Matteo, Roncador, Marco, Francia, Sofia, Crosetto, Nicola, Ljungman, Mats, Carninci, Piero and di Fagagna, Fabrizio d'Adda (2017). A damaged genome's transcriptional landscape through multilayered expression profiling around in situ-mapped DNA double-strand breaks. Nature Communications, 8 (1) 15656, 15656. doi: 10.1038/ncomms15656 |
|
2017 Journal Article DNA damage response inhibition at dysfunctional telomeres by modulation of telomeric DNA damage response RNAsRossiello, Francesca, Aguado, Julio, Sepe, Sara, Iannelli, Fabio, Nguyen, Quan, Pitchiaya, Sethuramasundaram, Carninci, Piero and Di Fagagna, Fabrizio d’Adda (2017). DNA damage response inhibition at dysfunctional telomeres by modulation of telomeric DNA damage response RNAs. Nature Communications, 8 (1) 13980, 13980. doi: 10.1038/ncomms13980 |
|
2016 Journal Article In vitro production of baculoviruses: identifying host and virus genes associated with high productivityNguyen, Quan, Tran, Trinh Tb, Chan, Leslie C. L., Nielsen, Lars K. and Reid, Steven (2016). In vitro production of baculoviruses: identifying host and virus genes associated with high productivity. Applied Microbiology and Biotechnology, 100 (21), 1-15. doi: 10.1007/s00253-016-7774-3 |
|
2014 Journal Article Inactivation of the tumor suppressor WTX in a subset of pediatric tumorsAkhavanfard, Sara, Vargas, Sara O., Han, Moonjoo, Nitta, Mai, Chang, Clarice B., Le, Long P., Fazlollahi, Ladan, Quan Nguyen, , Ma, Yunqing, Cosper, Arjola, Dias-Santagata, Dora, Han, Jae Y., Bergethon, Kristin, Borger, Darrell R., Ellisen, Leif W., Pomeroy, Scott L., Haber, Daniel A., Iafrate, A. John and Rivera, Miguel N. (2014). Inactivation of the tumor suppressor WTX in a subset of pediatric tumors. Genes Chromosomes & Cancer, 53 (1), 67-77. doi: 10.1002/gcc.22118 |
|
2014 Journal Article Farmer portfolios, strategic diversity management and climate-change adaptation - implications for policy in Vietnam and KenyaHoang, M. H., Namirembe, S., van Noordwijk, M., Catacutan, D., Öborn, I., Perez-Teran, A. S., Nguyen, H. Q. and Dumas-Johansen, M. K. (2014). Farmer portfolios, strategic diversity management and climate-change adaptation - implications for policy in Vietnam and Kenya. Climate and Development, 6 (3), 216-225. doi: 10.1080/17565529.2013.857588 |
|
2013 Journal Article Genome scale transcriptomics of baculovirus-insect interactionsNguyen,Quan, Nielsen, Lars K. and Reid, Steven (2013). Genome scale transcriptomics of baculovirus-insect interactions. Viruses, 5 (11), 2721-2747. doi: 10.3390/v5112721 |
|
2013 Journal Article Genome scale analysis of differential mRNA expression of Helicoverpa zea insect cells infected with a H. armigera baculovirusNguyen, Quan, Chan, Leslie C. L., Nielsen, Lars K. and Reid, Steven (2013). Genome scale analysis of differential mRNA expression of Helicoverpa zea insect cells infected with a H. armigera baculovirus. Virology, 444 (1-2), 158-170. doi: 10.1016/j.virol.2013.06.004 |
|
2013 Journal Article Multipurpose agroforestry as a climate change resiliency option for farmers: an example of local adaptation in VietnamNguyen, Quan, Hoang, Minh Ha, Oborn, Ingrid and Noordwijk, Meine (2013). Multipurpose agroforestry as a climate change resiliency option for farmers: an example of local adaptation in Vietnam. Climatic Change, 117 (1-2), 241-257. doi: 10.1007/s10584-012-0550-1 |
|
2012 Journal Article Transcriptome sequencing of and microarray development for a Helicoverpa zea cell line to investigate in vitro insect cell-baculovirus interactionsNguyen, Quan, Palfreyman, Robin W., Chan, Leslie C. L., Reid, Steven and Nielsen, Lars K. (2012). Transcriptome sequencing of and microarray development for a Helicoverpa zea cell line to investigate in vitro insect cell-baculovirus interactions. PLoS One, 7 (5) e36324, e36324.1-e36324.15. doi: 10.1371/journal.pone.0036324 |
|
2011 Journal Article Control of B cell development by the histone H2A deubiquitinase MYSM1Jiang, Xiao-Xia, Nguyen, Quan, Chou, YuChia, Wang, Tao, Nandakumar, Vijayalakshmi, Yates, Peter, Jones, Lindsey, Wang, Lifeng, Won, Haejung, Lee, Hye-Ra, Jung, Jae U., Müschen, Markus, Huang, Xue F. and Chen, Si-Yi (2011). Control of B cell development by the histone H2A deubiquitinase MYSM1. Immunity, 35 (6), 883-896. doi: 10.1016/j.immuni.2011.11.010 |
|
2011 Journal Article In vitro production of Helicoverpa baculovirus biopesticides: Automated selection of insect cell clones for manufacturing and systems biology studiesNguyen, Quan, Qi, Ying Mei, Wu, Yang, Chan, Leslie C. L., Nielsen, Lars K. and Reid, Steven (2011). In vitro production of Helicoverpa baculovirus biopesticides: Automated selection of insect cell clones for manufacturing and systems biology studies. Journal of Virological Methods, 175 (2), 197-205. doi: 10.1016/j.jviromet.2011.05.011 |
|
2003 Journal Article A Light-Activated Probe of Intracellular Protein Kinase ActivityVeldhuyzen, WF, Nguyen, Q, McMaster, G and Lawrence, DS (2003). A Light-Activated Probe of Intracellular Protein Kinase Activity. Journal of the American Chemical Society, 125 (44), 13358-13359. doi: 10.1021/ja037801x |
|
2000 Journal Article Multiplex detection and quantitation of proteins on Western blots using fluorescent probesGingrich, JC, Davis, DR and Nguyen, Q (2000). Multiplex detection and quantitation of proteins on Western blots using fluorescent probes. Biotechniques, 29 (3), 636-642. |
