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2025 Conference Publication Genomic landscape of melanoma-prone skinLee, K., Kao, Y.-C., Smith, D.J., Oey, H., Saldias Montivero, M.K., Causer, A., Christiansen, B.C., Nguyen, Q., Soyer, H.P. and Stark, M.S. (2025). Genomic landscape of melanoma-prone skin. 21st EADO Congress & 11th World Congress of Melanoma, Athens, Greece, 3-5 April 2025. London, United Kingdom: Elsevier. doi: 10.1016/j.ejcskn.2025.100506 |
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2024 Conference Publication Statistical analysis of cellular-level markers from the deconvolution of melanoma bulk transcriptomic dataZhang, Min, Arief, Vivi, McLachlan, Geoffrey, Nguyen, Quan and Basford, Kaye (2024). Statistical analysis of cellular-level markers from the deconvolution of melanoma bulk transcriptomic data. International Biometrics Society Conference (IBC), Atlanta, GA United States, 8-13 December 2024. |
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2024 Conference Publication Endothelial progenitors: Unlocking Tumor Vessel Normalization to Overcome Therapeutic Challenges in MelanomaSormani, L., Hashemi, G., Li, H., Zhou, C., Li, K., Chan, S., Tan, S.X., Nguyen, Q., Roy, E. and Khosrotehrani, K. (2024). Endothelial progenitors: Unlocking Tumor Vessel Normalization to Overcome Therapeutic Challenges in Melanoma. 53rd Annual ESDR Meeting, Lisbon, Portugal, 4-7 September 2024. Oxford, United Kingdom: Elsevier. doi: 10.1016/j.jid.2024.10.391 |
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2024 Conference Publication 404 Spatial transcriptomic signatures in primary melanomas associated with sentinel node positivityMuller, N. M., Tan, S. X., Zhou, C., Kao, Y., Stark, M., Nguyen, Q. and Khosrotehrani, K. (2024). 404 Spatial transcriptomic signatures in primary melanomas associated with sentinel node positivity. 53rd Annual ESDR Meeting, 4-7 September 2024, Lisbon, Portugal. Oxford, United Kingdom: Elsevier. doi: 10.1016/j.jid.2024.10.414 |
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2024 Conference Publication Targeting EPHA3 and EPHRIN A5: Advanced Precision Therapy For GBMDsouza, Rochelle, Skarne, Niclas, Mulay, Onkar, Harris, Lachlan, Holton, Emily, Zaman, Ashraf, Akgul, Seckin, Offenhauser, Carolin, Alexander, Hamish, Lwin, Zarnie, Jeffree, Rosalind, Inglis, Po-Ling, Powell, Joseph, Nguyen, Quan, Boyd, Andrew and Day, Bryan (2024). Targeting EPHA3 and EPHRIN A5: Advanced Precision Therapy For GBM. 2024 Society for Neuro-Oncology’s 29th Annual Meeting and Education Day, Houston, TX United States, 21-24 November 2024. Oxford, United Kingdom: Oxford University Press. doi: 10.1093/neuonc/noae165.0941 |
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2024 Conference Publication Epithelial cancers demonstrate IL34-associated dysfunction of Langerhans cellsDang, Thi Viet Trinh, Gillinder, Kevin R., Nguyen, Quan, Mulay, Onkar, Vo, Tuan, Mehdi, Ahmed M., Zhou, Chenhao, Brooks, Andrew J., Asplett, Kiran, Leggatt, Graham R., Hume, David A., Frazer, Ian H. and Chandra, Janin (2024). Epithelial cancers demonstrate IL34-associated dysfunction of Langerhans cells. AACR Special Conference in Cancer Research: Tumor Immunology and Immunotherapy, Boston, MA, United States, 18-21 October 2024. Philadelphia, PA, United States: American Association for Cancer Research. doi: 10.1158/2326-6074.tumimm24-a001 |
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2024 Conference Publication Young Investigator Award - Discovery & Translational ScienceAdams, Benjamin, Kim, Chang Seong, Wang, Xiangju, Nguyen, Quan, Xiong, Zherui, Hockey, Levi, Ng, Monica Suet Ying, Healy, Helen and Kassianos, Andrew (2024). Young Investigator Award - Discovery & Translational Science. 59th Annual Scientific Meeting of the Australian and New Zealand Society of Nephrology (ANZSN), Adelaide, SA Australia, 31 August–4 September 2024. Richmond, VIC Australia: John Wiley & Sons. |
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2024 Conference Publication Spatial Transcriptomic Sequencing Of A DIPG Patient Tumour ResourceKordowski, Anja, Mulay, Onkar, Harris, Lachlan, Nguyen, Quan H and Day, Bryan W. (2024). Spatial Transcriptomic Sequencing Of A DIPG Patient Tumour Resource. 2024 International Symposium on Pediatric Neuro-Oncology (ISPNO), Philadelphia, PA United States, 29 June – 2 July 2024. Cary, NC United States: Oxford University Press. doi: 10.1093/neuonc/noae064.102 |
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2024 Conference Publication Cellular Genomics of Bronchoalveolar Lavage Reveals Insight into Mechanisms of Human Pulmonary FibrosisZhang, L.-Y., Apte, S., Lutzky, V., Groves, P., Tan, M., de Silva, T.A., Nguyen, Q., Powell, J., Chambers, D. and O'Sullivan, B. (2024). Cellular Genomics of Bronchoalveolar Lavage Reveals Insight into Mechanisms of Human Pulmonary Fibrosis. American Thoracic Society 2024 International Conference, San Diego, CA United States, 17-22 May 2024. New York, NY United States: American Thoracic Society. doi: 10.1164/ajrccm-conference.2024.209.1_meetingabstracts.a2580 |
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2024 Conference Publication A spatially mapped gene expression signature for intestinal stem-like cells identifies high-risk precursors of gastric cancerWichmann, Ignacio A., Huang, Robert J., Su, Andrew, Sathe, Anuja, Shum, Miranda V., Grimes, Susan M., Meka, Rithika, Almeda, Alison, Bai, Xiangqi, Shen, Jeanne, Nguyen, Quan, Amieva, Manuel, Hwang, Joo Ha and Ji, Hanlee P. (2024). A spatially mapped gene expression signature for intestinal stem-like cells identifies high-risk precursors of gastric cancer. American Association for Cancer Research Annual Meeting 2024, San Diego, CA United States, 5-10 April 2024. Philadelphia, PA United States: American Association for Cancer Research. doi: 10.1158/1538-7445.am2024-1140 |
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2023 Conference Publication 275 Spatial transcriptomics of early invasive melanomas reveals molecular determinants of patient survivalZhou, C., Tan, S. X., Kao, Y., Claeson, M., Brown, S., Lambie, D., Whiteman, D., Soyer, H., Stark, M., Nguyen, Q. and Khosrotehrani, K. (2023). 275 Spatial transcriptomics of early invasive melanomas reveals molecular determinants of patient survival. 1st International Societies for Investigative Dermatology Meeting (ISID 2023), Tokyo, Japan, 10 - 13 May 2023. Oxford, United Kingdom: Elsevier. doi: 10.1016/j.jid.2023.03.279 |
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2023 Conference Publication A novel spatial trajectory inference method for detecting regional breast cancer progression from spatial transcriptomics dataPham, Duy and Nguyen, Quan (2023). A novel spatial trajectory inference method for detecting regional breast cancer progression from spatial transcriptomics data. AACR Annual Meeting 2023, Orlando, FL United States, 14-19 April 2023. Philadelphia, PA United States: American Association for Cancer Research. doi: 10.1158/1538-7445.am2023-lb076 |
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2023 Conference Publication Applying spatial omics and computational integrative analyses to study drug responses and cancer immune cell interactionsTan, Xiao, Causer, Andrew, Vo, Tuan Quang Anh, Ma, Ning, Cheikh, Bassem Ben, Genovesi, Laura, Gonzalez-Cruz, Jazmina, Nguyen, Quan and Braubach, Oliver (2023). Applying spatial omics and computational integrative analyses to study drug responses and cancer immune cell interactions. AACR Annual Meeting 2023, Orlando, FL United States, 14-19 April 2023. Philadelphia, PA United States: American Association for Cancer Research. doi: 10.1158/1538-7445.am2023-4703 |
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2023 Conference Publication Abstract 3116: Spatial single-cell atlas of stage III colorectal cancerSu, Andrew, Tran, Minh, Lee, HoJoon, Sathe, Anuja, Bai, Xiangqi, Cruz, Richard, Pflieger, Lance, Nguyen, Quan, Ji, Hanlee P. and Rhodes, Terence (2023). Abstract 3116: Spatial single-cell atlas of stage III colorectal cancer. AACR Annual Meeting 2023, Orlando, FL United States, 14-19 April 2023. Philadelphia, PA United States: American Association for Cancer Research. doi: 10.1158/1538-7445.am2023-3116 |
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2023 Conference Publication Adversarial online multi-task reinforcement learningNguyen, Quan and Mehta, Nishant A. (2023). Adversarial online multi-task reinforcement learning. 34th International Conference on Algorithmic Learning Theory (ALT), Singapore, Singapore, 20-23 February 2023. San Diego, CA USA: Journal of Machine Learning Research. |
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2023 Conference Publication Using cellular composition estimated from bulk RNA-seq data to suggest cellular level markers for melanoma survivalZhang, Min, Basford, Kaye, Arief, Vivi, McLachlan, Geoff and Nguyen, Quan (2023). Using cellular composition estimated from bulk RNA-seq data to suggest cellular level markers for melanoma survival. IBS-AR/SEEM Conference, Bay of Islands, Aotearoa, New Zealand, 27 November-1 December 2023. |
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2022 Conference Publication Exploratory data analysis of TCGA skin cutaneous melanoma RNA-seq dataZhang, Min, Arief, Vivi, McLachlan, Geoffrey, Nguyen, Quan and Basford, Kaye (2022). Exploratory data analysis of TCGA skin cutaneous melanoma RNA-seq data. Australasian Applied Statistics Conference (AASC), Inverloch, VIC Australia, 28 November - 2 December 2022. |
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2022 Conference Publication No Bystander Cardiopulmonary Resuscitation For Out-Of-Hospital Cardiac Arrest In Vietnam: Impact On The OutcomesDo, Son N., Luong, Chinh Q., Manabe, Toshie, Nguyen, My H., Pham, Dung T., Ton, Tra T., Hoang, Quoc T., Nguyen, Dat T., Pham, Thao T., Hoang, Hanh T., Khuong, Dai Q., Nguyen, Quan H., Nguyen, Tuan A., Dang, Hien D., Hoang, Hai B., Nguyen, Chi V., Nguyen, Anh D., McNally, Bryan F., Ong, Marcus E. and Dao, Co X. (2022). No Bystander Cardiopulmonary Resuscitation For Out-Of-Hospital Cardiac Arrest In Vietnam: Impact On The Outcomes. Scientific Sessions of the American-Heart-Association / Resuscitation Science Symposium, Chicago Il, Nov 05-06, 2022. PHILADELPHIA: LIPPINCOTT WILLIAMS & WILKINS. doi: 10.1161/circ.146.suppl_1.148 |
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2022 Conference Publication Abstract 3817: A single-cell, spatial multiomics atlas and cellular interactome of all major skin cancer typesGrice, Laura, Ni, Guiyan, Jin, Xinnan, Tran, Minh, Killingbeck, Emily, Gregory, Mark, Mulay, Onkar, Teoh, Siok-Min, Kulasinghe, Arutha, Leon, Michael, Murphy, Sarah, Warren, Sarah, Kim, Youngmi and Nguyen, Quan (2022). Abstract 3817: A single-cell, spatial multiomics atlas and cellular interactome of all major skin cancer types. American Association for Cancer Research Annual Meeting, Philadelphia, PA, United States, 8-13 April 2022. Philadelphia, PA, United States: American Association for Cancer Research. doi: 10.1158/1538-7445.am2022-3817 |
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2022 Conference Publication MEDB-06. Spatial transcriptomic analysis of Sonic Hedgehog Medulloblastoma identifies that loss of heterogeneity and induced differentiation underlies the response to CDK4/6 inhibitionVo, Tuan, Balderson, Brad, Jones, Kahli, Crawford, Joanna, Millar, Amanda, Tolson, Elissa, Ruitenberg, Marc, Robertson, Thomas, Bhuva, Dharmesh, Davis, Melissa, Wainwright, Brandon, Nguyen, Quan and Genovesi, Laura (2022). MEDB-06. Spatial transcriptomic analysis of Sonic Hedgehog Medulloblastoma identifies that loss of heterogeneity and induced differentiation underlies the response to CDK4/6 inhibition. International Symposium on Pediatric Neuro-Oncology, Hamburg, Germany, 12–15 June 2022. Cary, NC, United States: Oxford University Press. doi: 10.1093/neuonc/noac079.381 |
