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2017

Journal Article

Whole genome analysis of cephalosporin-resistant Escherichia coli from bloodstream infections in Australia, New Zealand and Singapore: high prevalence of CMY-2 producers and ST131 carrying blaCTX-M-15 and blaCTX-M-27

Harris, Patrick N. A., Ben Zakour, Nouri L., Roberts, Leah W., Wailan, Alexander M., Zowawi, Hosam M., Tambyah, Paul A., Lye, David C., Jureen, Roland, Lee, Tau H., Yin, Mo, Izharuddin, Ezlyn, Looke, David, Runnegar, Naomi, Rogers, Benjamin, Bhally, Hasan, Crowe, Amy, Schembri, Mark A., Beatson, Scott A. and Paterson, David L. (2017). Whole genome analysis of cephalosporin-resistant Escherichia coli from bloodstream infections in Australia, New Zealand and Singapore: high prevalence of CMY-2 producers and ST131 carrying blaCTX-M-15 and blaCTX-M-27. The Journal of Antimicrobial Chemotherapy, 73 (3), 634-642. doi: 10.1093/jac/dkx466

Whole genome analysis of cephalosporin-resistant Escherichia coli from bloodstream infections in Australia, New Zealand and Singapore: high prevalence of CMY-2 producers and ST131 carrying blaCTX-M-15 and blaCTX-M-27

2017

Journal Article

Geographical variation in therapy for bloodstream infections due to multidrug-resistant Enterobacteriaceae: a post-hoc analysis of the INCREMENT study

Harris, Patrick N. A., Pezzani, M. Diletta, Gutierrez-Gutierrez, Belen, Viale, Pierluigi, Hsueh, Po-Ren, Ruiz-Garbajosa, Patricia, Venditti, Mario, Tumbarello, Mario, Navarro-Francisco, Carolina, Calbo, Esther, Akova, Murat, Giamarellou, Helen, Oliver, Antonio, Almirante, Benito, Gasch, Oriol, Martinez-Martinez, Luis, Schwaber, Mitchell J., Daikos, George, Pitout, Johann, Pena, Carmen, Hernandez-Torres, Alicia, Doi, Yohei, Perez, Federico, Tuon, Felipe Francisco, Tacconelli, Evelina, Carmeli, Yehuda, Bonomo, Robert A., Pascual, Alvaro, Paterson, David L. and Rodriguez-Bano, Jesus (2017). Geographical variation in therapy for bloodstream infections due to multidrug-resistant Enterobacteriaceae: a post-hoc analysis of the INCREMENT study. International Journal of Antimicrobial Agents, 50 (5), 664-672. doi: 10.1016/j.ijantimicag.2017.08.005

Geographical variation in therapy for bloodstream infections due to multidrug-resistant Enterobacteriaceae: a post-hoc analysis of the INCREMENT study

2017

Journal Article

Proposed primary endpoints for use in clinical trials that compare treatment options for bloodstream infection in adults: a consensus definition

Harris, P.N.A., McNamara, J.F., Lye, D.C., Davis, J.S., Bernard, L., Cheng, A.C., Doi, Y., Fowler, V.G., Kaye, K.S., Leibovici, L., Lipman, J., Llewelyn, M.J., Munoz-Price, S., Paul, M., Peleg, A.Y., Rodriguez-Bano, J., Rogers, B.A., Seifert, H., Thamlikitkul, V., Thwaites, G., Tong, S.Y.C., Turnidge, J., Utili, R., Webb, S.A.R. and Paterson, D.L. (2017). Proposed primary endpoints for use in clinical trials that compare treatment options for bloodstream infection in adults: a consensus definition. Clinical Microbiology and Infection, 23 (8), 533-541. doi: 10.1016/j.cmi.2016.10.023

Proposed primary endpoints for use in clinical trials that compare treatment options for bloodstream infection in adults: a consensus definition

2017

Journal Article

Chlorhexidine gluconate or polyhexamethylene biguanide disc dressing to reduce the incidence of central-line-associated bloodstream infection: a feasibility randomized controlled trial (the CLABSI trial)

Webster, J., Larsen, E., Marsh, N., Choudhury, A., Harris, P. and Rickard, C. M. (2017). Chlorhexidine gluconate or polyhexamethylene biguanide disc dressing to reduce the incidence of central-line-associated bloodstream infection: a feasibility randomized controlled trial (the CLABSI trial). Journal of Hospital Infection, 96 (3), 223-228. doi: 10.1016/j.jhin.2017.04.009

Chlorhexidine gluconate or polyhexamethylene biguanide disc dressing to reduce the incidence of central-line-associated bloodstream infection: a feasibility randomized controlled trial (the CLABSI trial)

2017

Conference Publication

FOSFOMYCIN PROPHYLAXIS FOR TRANSRECTAL PROSTATE BIOPSY REDUCES INFECTIOUS COMPLICATIONS: A SYSTEMATIC REVIEW AND META-ANALYSIS

Roberts, Matthew, Scott, Susan, Harris, Patrick, Naber, Kurt, Wagenlehner, Florian and Doi, Suhail (2017). FOSFOMYCIN PROPHYLAXIS FOR TRANSRECTAL PROSTATE BIOPSY REDUCES INFECTIOUS COMPLICATIONS: A SYSTEMATIC REVIEW AND META-ANALYSIS. HOBOKEN: WILEY.

FOSFOMYCIN PROPHYLAXIS FOR TRANSRECTAL PROSTATE BIOPSY REDUCES INFECTIOUS COMPLICATIONS: A SYSTEMATIC REVIEW AND META-ANALYSIS

2017

Journal Article

Global prevalence of carbapenem resistance in neutropenic patients and association with mortality and carbapenem use: systematic review and meta-analysis

Righi, Elda, Peri, Anna Maria, Harris, Patrick N. A., Wailan, Alexander M., Liborio, Mariana, Lane, Steven W. and Paterson, David L. (2017). Global prevalence of carbapenem resistance in neutropenic patients and association with mortality and carbapenem use: systematic review and meta-analysis. Journal of Antimicrobial Chemotherapy, 72 (3), 668-677. doi: 10.1093/jac/dkw459

Global prevalence of carbapenem resistance in neutropenic patients and association with mortality and carbapenem use: systematic review and meta-analysis

2017

Journal Article

Risk factors for relapse or persistence of bacteraemia caused by Enterobacter spp.: a case-control study

Harris, Patrick N. A., Peri, Anna M., Pelecanos, Anita M., Hughes, Carly M., Paterson, David L. and Ferguson, John K. (2017). Risk factors for relapse or persistence of bacteraemia caused by Enterobacter spp.: a case-control study. Antimicrobial Resistance and Infection Control, 6 (1) 14, 14. doi: 10.1186/s13756-017-0177-0

Risk factors for relapse or persistence of bacteraemia caused by Enterobacter spp.: a case-control study

2017

Conference Publication

Ability of blaNDM to disseminate worldwide into extensively drug-resistant bacterial hosts poses a major challenge to infection control and treatment: a global multi-centred whole-genome sequencing analysis

Ng, Oon Tek , Lee, Jia Jun , Harris, Patrick , Sidjabat, Hanna Evelina , Zowawi, Hosam , Shan Rajahram, Giri , Abdul Hameed, Ahneez Bt , Menon, Jayaram , Fong, Fennie Kah Ling , Hopkins, Katie , Wareham, David , Ho, Pak-Leung , Lo, Stephanie , Lau, Andes , Isozumi, Rie , Patel, Robin , Cunningham, Scott A. , Vasoo, Shawn , Kojic, Milan and Khong, Wei Xin (2017). Ability of blaNDM to disseminate worldwide into extensively drug-resistant bacterial hosts poses a major challenge to infection control and treatment: a global multi-centred whole-genome sequencing analysis. The 27th European Congress on Clinical Microbiology and Infectious Diseases (ECCMID), Vienna Austria, 22-25 April 2017.

Ability of blaNDM to disseminate worldwide into extensively drug-resistant bacterial hosts poses a major challenge to infection control and treatment: a global multi-centred whole-genome sequencing analysis

2017

Other Outputs

Risk factors for relapse or persistence of bacteraemia caused by Enterobacter spp.: a case-control study

Harris, Patrick N.A. (2017). Risk factors for relapse or persistence of bacteraemia caused by Enterobacter spp.: a case-control study. Harvard Dataverse. (Dataset)

Risk factors for relapse or persistence of bacteraemia caused by Enterobacter spp.: a case-control study

2017

Book Chapter

Meropenem / Meropenem-vaborbactam

Peleg, A. Y. and Harris, P. (2017). Meropenem / Meropenem-vaborbactam. Kucers' the Use of Antibiotics: A Clinical Review of Antibacterial, Antifungal, Antiparasitic and Antiviral Drugs. (pp. 697-722) edited by Lindsay Grayson. Boca Raton, FL United States: Taylor & Francis. doi: 10.1201/9781315152110

Meropenem / Meropenem-vaborbactam

2017

Other Outputs

Clinical meta-data from patients with bloodstream infections caused by 3GC-resistant E. coli

Harris, Patrick N.A. (2017). Clinical meta-data from patients with bloodstream infections caused by 3GC-resistant E. coli. Harvard Dataverse. (Dataset)

Clinical meta-data from patients with bloodstream infections caused by 3GC-resistant E. coli

2016

Journal Article

Prostate biopsy-related infection: a systematic review of risk factors, prevention strategies, and management approaches

Roberts, Matthew J., Bennett, Harrison Y., Harris, Patrick N., Holmes, Michael, Grummet, Jeremy, Naber, Kurt and Wagenlehner, Florian M. E. (2016). Prostate biopsy-related infection: a systematic review of risk factors, prevention strategies, and management approaches. Urology, 104, 11-21. doi: 10.1016/j.urology.2016.12.011

Prostate biopsy-related infection: a systematic review of risk factors, prevention strategies, and management approaches

2016

Journal Article

Detection of carbapenemase activity in Enterobacteriaceae using LC-MS/MS in comparison with the neo-rapid CARB kit using direct visual assessment and colorimetry

Huber, Charlotte A., Sidjabat, Hanna E., Zowawi, Hosam M., Kvaskoff, David, Reed, Sarah, McNamara, John F., McCarthy, Kate L., Harris, Patrick, Toh, Benjamin, Wailan, Alexander M. and Paterson, David L. (2016). Detection of carbapenemase activity in Enterobacteriaceae using LC-MS/MS in comparison with the neo-rapid CARB kit using direct visual assessment and colorimetry. Journal of Microbiological Methods, 131, 68-72. doi: 10.1016/j.mimet.2016.10.005

Detection of carbapenemase activity in Enterobacteriaceae using LC-MS/MS in comparison with the neo-rapid CARB kit using direct visual assessment and colorimetry

2016

Journal Article

Central nervous system nocardiosis in Queensland: a report of 20 cases and review of the literature

Rafiei, Nastaran, Peri, Anna Maria, Righi, Elda, Harris, Patrick and Paterson, David L. (2016). Central nervous system nocardiosis in Queensland: a report of 20 cases and review of the literature. Medicine, 95 (46) e5255, e5255. doi: 10.1097/MD.0000000000005255

Central nervous system nocardiosis in Queensland: a report of 20 cases and review of the literature

2016

Journal Article

An outbreak of scrub typhus in military personnel despite protocols for antibiotic prophylaxis: doxycycline resistance excluded by a quantitative PCR-based susceptibility assay

Harris, Patrick N. A., Oltvolgyi, Csongor, Islam, Aminul, Hussain-Yusuf, Hazizul, Loewenthal, Mark R., Vincent, Gemma, Stenos, John and Graves, Stephen (2016). An outbreak of scrub typhus in military personnel despite protocols for antibiotic prophylaxis: doxycycline resistance excluded by a quantitative PCR-based susceptibility assay. Microbes and Infection, 18 (6), 406-411. doi: 10.1016/j.micinf.2016.03.006

An outbreak of scrub typhus in military personnel despite protocols for antibiotic prophylaxis: doxycycline resistance excluded by a quantitative PCR-based susceptibility assay

2016

Journal Article

Empiric piperacillin-tazobactam versus carbapenems in the treatment of bacteraemia due to extended-spectrum beta-lactamase-producing enterobacteriaceae

Ng, Tat Ming, Khong, Wendy X., Harris, Patrick N. A., De, Partha P., Chow, Angela, Tambyah, Paul A. and Lye, David C. (2016). Empiric piperacillin-tazobactam versus carbapenems in the treatment of bacteraemia due to extended-spectrum beta-lactamase-producing enterobacteriaceae. Plos One, 11 (4) e0153696, e0153696. doi: 10.1371/journal.pone.0153696

Empiric piperacillin-tazobactam versus carbapenems in the treatment of bacteraemia due to extended-spectrum beta-lactamase-producing enterobacteriaceae

2016

Journal Article

Colistin resistance: a major breach in our last line of defence

Paterson, David L. and Harris, Patrick N. A. (2016). Colistin resistance: a major breach in our last line of defence. The Lancet Infectious Diseases, 16 (2), 132-133. doi: 10.1016/S1473-3099(15)00463-6

Colistin resistance: a major breach in our last line of defence

2016

Conference Publication

Mapping the global prevalence of resistance to antimicrobials in gram-negative urinary pathogens: a meta-analysis of contemporary studies

Harris, Patrick N. A., Zowawi, Hosam M., Banu, Shahera and Paterson, David L. (2016). Mapping the global prevalence of resistance to antimicrobials in gram-negative urinary pathogens: a meta-analysis of contemporary studies. The 55th Interscience Conference of Antimicrobial Agents and Chemotherapy (ICAAC) / International Society of Chemotherapy (ISC)’s International Congress of Chemotherapy and Infection (ICC) - ICAAC/ICC, San Diego, CA, United States, 18-22 September 2016.

Mapping the global prevalence of resistance to antimicrobials in gram-negative urinary pathogens: a meta-analysis of contemporary studies

2016

Journal Article

Carbapenems versus alternative antibiotics for the treatment of bloodstream infections caused by Enterobacter, Citrobacter or Serratia species: a systematic review with meta-analysis

Harris, Patrick N. A., Wei, Jane Y., Shen, Andrew W., Abdile, Ahmed A., Paynter, Stuart, Huxley, Rachel R., Pandeya, Nirmala, Doi, Yohei, Huh, Kyungmin, O'Neal, Catherine S., Talbot, Thomas R. and Paterson, David L. (2016). Carbapenems versus alternative antibiotics for the treatment of bloodstream infections caused by Enterobacter, Citrobacter or Serratia species: a systematic review with meta-analysis. Journal of Antimicrobial Chemotherapy, 71 (2) dkv346, 296-306. doi: 10.1093/jac/dkv346

Carbapenems versus alternative antibiotics for the treatment of bloodstream infections caused by Enterobacter, Citrobacter or Serratia species: a systematic review with meta-analysis

2016

Conference Publication

Multi-drug Resistant Enterobacteriaceae from Bhutan: Whole Genome Sequencing of ESBL and Carbapenemase-producing Strains

Harris, Patrick N. A., Wailan, Alexander, Buckley, Cameron, Catchpoole, Elizabeth, Zowawi, Hosam M., Whiley, David, Tshokey, Tshokey, Sharma, Ragunath, Chong, Smathi and Paterson, David L. (2016). Multi-drug Resistant Enterobacteriaceae from Bhutan: Whole Genome Sequencing of ESBL and Carbapenemase-producing Strains. International Congress for Tropical Medicine and Malaria (ICTMM 2016), Brisbane Australia, 18-22 September 2016.

Multi-drug Resistant Enterobacteriaceae from Bhutan: Whole Genome Sequencing of ESBL and Carbapenemase-producing Strains