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2020 Journal Article Oral cephalosporin and β-lactamase inhibitor combinations for ESBL-producing Enterobacteriaceae urinary tract infectionsStewart, Adam G., Harris, Patrick N. A., Henderson, Andrew, Schembri, Mark A. and Paterson, David L. (2020). Oral cephalosporin and β-lactamase inhibitor combinations for ESBL-producing Enterobacteriaceae urinary tract infections. Journal of Antimicrobial Chemotherapy, 75 (9), 2384-2393. doi: 10.1093/jac/dkaa183 |
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2020 Journal Article Genomic investigation reveals contaminated detergent as the source of an Extended-Spectrum-β-Lactamase-producing Klebsiella michiganensis outbreak in a neonatal unitChapman, Paul, Forde, Brian M., Roberts, Leah W., Bergh, Haakon, Vesey, Debra, Jennison, Amy V., Moss, Susan, Paterson, David L., Beatson, Scott A. and Harris, Patrick N. A. (2020). Genomic investigation reveals contaminated detergent as the source of an Extended-Spectrum-β-Lactamase-producing Klebsiella michiganensis outbreak in a neonatal unit. Journal of Clinical Microbiology, 58 (5) e01980. doi: 10.1128/jcm.01980-19 |
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2020 Journal Article Beyond the Core Genome: Tracking Plasmids in Outbreaks of Multidrug-resistant BacteriaHarris, Patrick N. A. and Wailan, Alexander M. (2020). Beyond the Core Genome: Tracking Plasmids in Outbreaks of Multidrug-resistant Bacteria. Clinical Infectious Diseases, 72 (3), 421-422. doi: 10.1093/cid/ciaa052 |
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2020 Conference Publication Pharmacodynamic evaluation of intermittent versus prolonged infusion dosing regimens of piperacillin/tazobactam in a hollow-fiber infection model against two susceptible Klebsiella pneumoniae clinical isolatesSumi, Chandra Datta, B.Sime, Fekade, Heffernan, Aaron J., Naicker, Saiyuri, Islam, Kamrul, Cottrell, Kyra, Harris, Patrick N.A. and Roberts, Jason A. (2020). Pharmacodynamic evaluation of intermittent versus prolonged infusion dosing regimens of piperacillin/tazobactam in a hollow-fiber infection model against two susceptible Klebsiella pneumoniae clinical isolates. Federation of Infection Societies Conference 2019, Edinburgh, United Kingdom, 11-14 November 2019. London, United Kingdom: The Microbiology Society. doi: 10.1099/acmi.fis2019.po0103 |
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2020 Journal Article Measuring patient-centred long-term outcome following a bloodstream infection: a pilot studyMcNamara, J. F., Harris, P. N. A., Chatfield, M. D., Lorenc, P. and Paterson, D. L. (2020). Measuring patient-centred long-term outcome following a bloodstream infection: a pilot study. Clinical Microbiology and Infection, 26 (2), 257.e1-257.e4. doi: 10.1016/j.cmi.2019.10.011 |
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2020 Journal Article Current evidence for therapy of ceftriaxone-resistant Gram-negative bacteremiaPaterson, David L., Henderson, Andrew and Harris, Patrick N. A. (2020). Current evidence for therapy of ceftriaxone-resistant Gram-negative bacteremia. Current Opinion in Infectious Diseases, 33 (1), 78-85. doi: 10.1097/QCO.0000000000000623 |
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2020 Journal Article Integrating multiple genomic technologies to investigate an outbreak of carbapenemase-producing Enterobacter hormaecheiRoberts, Leah W., Harris, Patrick N. A., Forde, Brian M., Ben Zakour, Nouri L., Catchpoole, Elizabeth, Stanton-Cook, Mitchell, Phan, Minh-Duy, Sidjabat, Hanna E., Bergh, Haakon, Heney, Claire, Gawthorne, Jayde A., Lipman, Jeffrey, Allworth, Anthony, Chan, Kok-Gan, Chong, Teik Min, Yin, Wai-Fong, Schembri, Mark A., Paterson, David L. and Beatson, Scott A. (2020). Integrating multiple genomic technologies to investigate an outbreak of carbapenemase-producing Enterobacter hormaechei. Nature Communications, 11 (1) 466, 466. doi: 10.1038/s41467-019-14139-5 |
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2020 Journal Article A hybrid simulation model approach to examine bacterial genome sequencing during a hospital outbreakElliott, Thomas M., Lee, Xing J., Foeglein, Anna, Harris, Patrick N. and Gordon, Louisa G. (2020). A hybrid simulation model approach to examine bacterial genome sequencing during a hospital outbreak. BMC Infectious Diseases, 20 (1) 72, 72. doi: 10.1186/s12879-019-4743-3 |
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2020 Journal Article Erratum to ‘When not to start antibiotics: avoiding antibiotic overuse in the intensive care unit’ [Clin Microbiol Infect 26 (1) (January 2020) 35–40](S1198743X19303969)(10.1016/j.cmi.2019.07.007)Denny, K. J., De Waele, J., Laupland, K. B., Harris, P. N.A. and Lipman, J. (2020). Erratum to ‘When not to start antibiotics: avoiding antibiotic overuse in the intensive care unit’ [Clin Microbiol Infect 26 (1) (January 2020) 35–40](S1198743X19303969)(10.1016/j.cmi.2019.07.007). Clinical Microbiology and Infection, 26 (6), 801-801. doi: 10.1016/j.cmi.2020.01.016 |
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2020 Journal Article Bacterial profile, multi-drug resistance and seasonality following lower limb orthopaedic surgery in tropical and subtropical Australian hospitals: an epidemiological cohort studyVickers, Mark L., Ballard, Emma L., Harris, Patrick N. A., Knibbs, Luke D., Jaiprakash, Anjali, Dulhunty, Joel M., Crawford, Ross W. and Parkinson, Benjamin (2020). Bacterial profile, multi-drug resistance and seasonality following lower limb orthopaedic surgery in tropical and subtropical Australian hospitals: an epidemiological cohort study. International Journal of Environmental Research and Public Health, 17 (2) 657, 1-15. doi: 10.3390/ijerph17020657 |
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2020 Journal Article When not to start antibiotics: avoiding antibiotic overuse in the intensive care unitDenny, K. J., De Waele, J., Laupland, K. B., Harris, P. N. A. and Lipman, J. (2020). When not to start antibiotics: avoiding antibiotic overuse in the intensive care unit. Clinical Microbiology and Infection, 26 (1), 35-40. doi: 10.1016/j.cmi.2019.07.007 |
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2020 Journal Article Clinical and Economic Outcomes of Genome Sequencing Availability on Containing a Hospital Outbreak of Resistant Escherichia coli in AustraliaLee, Xing J., Elliott, Thomas M., Harris, Patrick N. A., Douglas, Joel, Henderson, Belinda, Watson, Catherine, Paterson, David L., Schofield, Deborah S., Graves, Nicholas and Gordon, Louisa G. (2020). Clinical and Economic Outcomes of Genome Sequencing Availability on Containing a Hospital Outbreak of Resistant Escherichia coli in Australia. Value in Health, 23 (8), 994-1002. doi: 10.1016/j.jval.2020.03.006 |
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2020 Journal Article Evaluating the economic effects of genomic sequencing of pathogens to prioritise hospital patients competing for isolation bedsElliott, Thomas M., Hare, Nicole, Hajkowicz, Krispin, Hurst, Trish, Doidge, Michelle, Harris, Patrick N. and Gordon, Louisa G. (2020). Evaluating the economic effects of genomic sequencing of pathogens to prioritise hospital patients competing for isolation beds. Australian Health Review, 45 (1), 59-65. doi: 10.1071/AH20071 |
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2020 Conference Publication Rapid and sensitive molecular detection of antimicrobial resistance (AMR); towards point-of-care testing in low resource settingsAyfan, A., Ertl, N., Whiley, D., Paterson, D., Heney, C., Harris, P., Macdonald, J., Irwin, A. and Zowawi, H. (2020). Rapid and sensitive molecular detection of antimicrobial resistance (AMR); towards point-of-care testing in low resource settings. GCCMID 2019, Dubai, United Arab Emirates, 6-9 November 2019. Amsterdam, Netherlands: Elsevier. doi: 10.1016/j.jiph.2020.01.059 |
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2020 Conference Publication Molecular epidemiology and hospital spread of ceftriaxone non-susceptible enterobacterales in the Sunshine Coast region, AustraliaStewart, Adam, Sarovich, Derek, Price, Erin, Burnard, Delaney, Harris, Patrick, Choong, Keat and Subedi, Shradha (2020). Molecular epidemiology and hospital spread of ceftriaxone non-susceptible enterobacterales in the Sunshine Coast region, Australia. RACP Congress 2020: Balancing medical science with humanity, Online, May 2020. Richmond, VIC Australia: Wiley-Blackwell. doi: 10.1111/imj.4_14846 |
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2019 Journal Article Genomic analysis of carbapenemase-producing Enterobacteriaceae in Queensland reveals widespread transmission of blaIMP-4 on an IncHI2 plasmidRoberts, Leah W., Catchpoole, Elizabeth, Jennison, Amy V., Bergh, Haakon, Hume, Anna, Heney, Claire, George, Narelle, Paterson, David L., Schembri, Mark A., Beatson, Scott A. and Harris, Patrick N. A. (2019). Genomic analysis of carbapenemase-producing Enterobacteriaceae in Queensland reveals widespread transmission of blaIMP-4 on an IncHI2 plasmid. Microbial Genomics, 6 (1) 000321. doi: 10.1099/mgen.0.000321 |
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2019 Journal Article Quantitative real-time PCR assay for the rapid identification of the intrinsically multidrug-resistant bacterial pathogen Stenotrophomonas maltophiliaFraser, Tamieka A., Bell, Mikaela G., Harris, Patrick N. A., Bell, Scott C., Bergh, Haakon, Thuy-Khanh Nguyen,, Kidd, Timothy J., Nimmo, Graeme R., Sarovich, Derek S. and Price, Erin P. (2019). Quantitative real-time PCR assay for the rapid identification of the intrinsically multidrug-resistant bacterial pathogen Stenotrophomonas maltophilia. Microbial Genomics, 5 (10) 000307. doi: 10.1099/mgen.0.000307 |
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2019 Journal Article Benzylpenicillin versus flucloxacillin for penicillin susceptible Staphylococcus aureus bloodstream infections from a large retrospective cohort studyHenderson, A., Harris, P., Hartel, G., Paterson, D., Turnidge, J., Davis, J. S. and Tong, S. Y. C. (2019). Benzylpenicillin versus flucloxacillin for penicillin susceptible Staphylococcus aureus bloodstream infections from a large retrospective cohort study. International Journal of Antimicrobial Agents, 54 (4), 491-495. doi: 10.1016/j.ijantimicag.2019.05.020 |
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2019 Journal Article Modifiable risk factors for multidrug-resistant Gram-negative infection in critically ill burn patients: a systematic review and meta-analysisVickers, Mark L., Malacova, Eva, Milinovich, Gabriel J., Harris, Patrick, Eriksson, Lars, Dulhunty, Joel M. and Cotta, Menino O. (2019). Modifiable risk factors for multidrug-resistant Gram-negative infection in critically ill burn patients: a systematic review and meta-analysis. ANZ Journal of Surgery, 89 (10) ans.15393, 1256-1260. doi: 10.1111/ans.15393 |
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2019 Journal Article Bacterial identification using an Absciex 5800 TOF/TOF MALDI research instrument and an external databaseHuber, Charlotte A, Pflüger, Valentin, Reed, Sarah, Cottrell, Kyra, Sidjabat, Hanna E, Ranasinghe, Ama, Zowawi, Hosam, Harris, Patrick and Paterson, David L (2019). Bacterial identification using an Absciex 5800 TOF/TOF MALDI research instrument and an external database. Journal of Microbiological Methods, 164 105685, 105685. doi: 10.1016/j.mimet.2019.105685 |
