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2022 Journal Article Plasmid-mediated ciprofloxacin resistance imparts a selective advantage on Escherichia coli ST131Phan, Minh-Duy, Peters, Kate M., Alvarez Fraga, Laura, Wallis, Steven C., Hancock, Steven, Nhu, Nguyen Thi Khanh, Forde, Brian, Bauer, Michelle J., Paterson, David L., Beatson, Scott A, Lipman, Jeffrey and Schembri, Mark A. (2022). Plasmid-mediated ciprofloxacin resistance imparts a selective advantage on Escherichia coli ST131. Antimicrobial Agents and Chemotherapy, 66 (1) e02146-21, 1-11. doi: 10.1128/aac.02146-21 |
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2021 Journal Article Characterisation of DtrJ as an IncC plasmid conjugative DNA transfer componentHancock, Steven J., Phan, Minh‐Duy, Roberts, Leah, Vu, Thu Ngoc Minh, Harris, Patrick N.A., Beatson, Scott A. and Schembri, Mark A. (2021). Characterisation of DtrJ as an IncC plasmid conjugative DNA transfer component. Molecular Microbiology, 116 (1), 154-167. doi: 10.1111/mmi.14697 |
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2020 Journal Article Comprehensive analysis of IncC plasmid conjugation identifies a crucial role for the transcriptional regulator AcaBHancock, Steven J., Phan, Minh-Duy, Luo, Zhenyao, Lo, Alvin W., Peters, Kate M., Nhu, Nguyen Thi Khanh, Forde, Brian M., Whitfield, Jason, Yang, Ji, Strugnell, Richard A., Paterson, David L., Walsh, Timothy R., Kobe, Bostjan, Beatson, Scott A. and Schembri, Mark A. (2020). Comprehensive analysis of IncC plasmid conjugation identifies a crucial role for the transcriptional regulator AcaB. Nature Microbiology, 5 (11), 1340-1348. doi: 10.1038/s41564-020-0775-0 |
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2020 Journal Article Uncovering novel susceptibility targets to enhance the efficacy of third-generation cephalosporins against ESBL-producing uropathogenic Escherichia coliPhan, Minh-Duy, Bottomley, Amy L., Peters, Kate M., Harry, Elizabeth J. and Schembri, Mark A. (2020). Uncovering novel susceptibility targets to enhance the efficacy of third-generation cephalosporins against ESBL-producing uropathogenic Escherichia coli. Journal of Antimicrobial Chemotherapy, 75 (6), 1415-1423. doi: 10.1093/jac/dkaa023 |
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2026 Journal Article Genomic and AHPND pathogenesis characterization of a novel Vibrio parahaemolyticus strain carrying an ISVal1-like insertion in pirBvpHuynh, Tuan-Binh, Le, Manh-Liem, Bui-Nguyen, Tram-Anh, Ha, Thi Phuong Trinh, Van, Thi Thu Hao, Vo, Van-Tuan, Phan, Minh-Duy and Tran-Van, Hieu (2026). Genomic and AHPND pathogenesis characterization of a novel Vibrio parahaemolyticus strain carrying an ISVal1-like insertion in pirBvp. Journal of Invertebrate Pathology, 217 108606, 108606. doi: 10.1016/j.jip.2026.108606 |
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2026 Journal Article 185 Recurrent TRIO De Novo Variants Drive a Novel Neurodevelopmental Syndrome Featuring Human Congenital HydrocephalusDennis, Evan, Mehta, Neel, Allington, Garrett, Mekbib, Kedous Y., Davalan, William, Phan, Duy, Haider, Shozeb and Kahle, Kristopher T. (2026). 185 Recurrent TRIO De Novo Variants Drive a Novel Neurodevelopmental Syndrome Featuring Human Congenital Hydrocephalus. Neurosurgery, 72 (Supplement_1), 37-37. doi: 10.1227/neu.0000000000003964_185 |
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2026 Journal Article Natural maternal immunity protects neonates from Escherichia coli sepsisDiep, Raymond E., Adhikari, Ujjwal, Gokce Tezel, Kubra, Pham, Giang, Burrell, Allison R., Staat, Mary A., Nhu, Nguyen Thi Khanh, Phan, Minh-Duy, Peters, Kate M., Schembri, Mark A., Saunders, Scott H., Haslam, David B., Erickson, John J., Chavez-Bueno, Susana and Way, Sing Sing (2026). Natural maternal immunity protects neonates from Escherichia coli sepsis. Nature, 653 (8114), 1-9. doi: 10.1038/s41586-026-10225-z |
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2026 Journal Article Bacterial reporter–paired scRNA sequencing reveals cross talk between zinc starvation and zinc toxicity in macrophage antibacterial defensevon Pein, Jessica B., Andersen, Stacey B., Xu, Jon, Phan, Minh-Duy, Dalton, Emma K., Koczerka, Michael, Stocks, Claudia J., Curson, James E. B., Vandeleur, Zoe, Condon, Nicholas D., Hancock, Steven J., Nefzger, Christian M., Palpant, Nathan J., Ramnath, Divya, Kapetanovic, Ronan, Schembri, Mark A. and Sweet, Matthew J. (2026). Bacterial reporter–paired scRNA sequencing reveals cross talk between zinc starvation and zinc toxicity in macrophage antibacterial defense. Proceedings of the National Academy of Sciences, 123 (11) e2530503123, 1-12. doi: 10.1073/pnas.2530503123 |
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2026 Journal Article Multimodal analysis of cell-free DNA to improve early detection of gastric cancerLong, Vo Duy, Huynh, Le Anh Khoa, Vo, Dac Ho, Nguyen, Thi Hue Hanh, Van, Thi Tuong Vi, Nguyen, Giang Thi Huong, Doan, Thuy Nguyen, Nguyen, Viet Hai, Tran, Quang Dat, Dang, Quang Thong, Nguyen, Vu Tuan Anh, Ho, Le Minh Quoc, Ha, Thi Phuong Dung, Dang, Thi Ngoc Dung, Nguyen, Pham Thanh Nhan, Nguyen, Khac Tien, Ho, Van Chien, Le, Thi Loc, Nguyen, Thi Hong Nhung, Tu, Ngoc Hieu, Tran, Thanh Son, Jasmine, Thanh Xuan, Vo, Thi Loan, Nai, Thi Huong Thoang, Tran, Thuy Trang, Truong, My Hoang, Tran, Ngan Chau, Nguyen, Thanh Cong, Nguyen, Thi Truc ... Tran, Le Son (2026). Multimodal analysis of cell-free DNA to improve early detection of gastric cancer. BMC Cancer, 26 (1) 416, 1. doi: 10.1186/s12885-026-15720-0 |
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2026 Journal Article Identification of public neoantigens with broad HLA class I coverage as candidates for off-the-shelf cancer vaccine development in colorectal cancerTran, Diem TP, Nguyen, Bui Que Tran, Nguyen, Huu Thinh, Pham, Thi Mong Quynh, Nguyen, Dinh Viet Linh, Nguyen, Thanh Nhan, Ho, Thi Kim Cuong, Nguyen, Vy, Nguyen, Pham Trung Dung, Tran, Duc Huy, Tran, Thanh Sang, Pham, Truong-Vinh Ngoc, Le, Minh-Triet, Giang, Hoa, Nguyen, Hoai Nghia, Phan, Minh-Duy and Tran, Le Son (2026). Identification of public neoantigens with broad HLA class I coverage as candidates for off-the-shelf cancer vaccine development in colorectal cancer. Frontiers in Immunology, 17 1686224, 17. doi: 10.3389/fimmu.2026.1686224 |
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2026 Journal Article NeuO-mediated O-acetylation of uropathogenic Escherichia coli K1 capsule enhances resistance to phage and neutrophil killingWalker, Lachlan L., Nhu, Nguyen Thi Khanh, Lian, Zheng Jie, Peters, Kate M., Monteleone, Mercedes, Connolly, James P. R., Walker, Mark J., Forde, Brian M., Schroder, Kate, Sweet, Matthew J., Phan, Minh-Duy and Schembri, Mark A. (2026). NeuO-mediated O-acetylation of uropathogenic Escherichia coli K1 capsule enhances resistance to phage and neutrophil killing. Journal of Bacteriology, 208 (3) e00610-25, 1-13. doi: 10.1128/jb.00610-25 |
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2026 Journal Article PP01.65: A Cost-effective Multimodal cfDNA Assay Improves Lung Cancer Detection in Symptomatic Patients and High-Risk Screening CohortsChi Nguyen, Van Thien, Vo, Dac Ho, Tran, Trung Hieu, Pham, Ngoc Tan, Nguyen, Trong Hieu, Van Phan, Thi, Dao, Thi Huyen, Phuc Nguyen, Huu Tam, Dang Nguyen, Luu Hong, Nguyen, Duy Sinh, Tang, Hung Sang, Giang, Hoa, Phan, Minh Duy, Nguyen, Hoai-Nghia and Tran, Le Son (2026). PP01.65: A Cost-effective Multimodal cfDNA Assay Improves Lung Cancer Detection in Symptomatic Patients and High-Risk Screening Cohorts. Journal of Thoracic Oncology, 21 (1), S32-S33. doi: 10.1016/j.jtho.2025.12.065 |
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2026 Journal Article Convergence of plasmid-driven virulence and antibiotic resistance in Escherichia coliLian, Zheng Jie, Nhu, Nguyen Thi Khanh, Ravi, Chitra, Chang, Chyden, Martinez-Roman, Irene, Phan, Minh-Duy and Schembri, Mark A. (2026). Convergence of plasmid-driven virulence and antibiotic resistance in Escherichia coli. Nature Communications, 17 (1) 505, 1-13. doi: 10.1038/s41467-025-67202-9 |
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2025 Journal Article Tumor genomic and transcriptomic analysis integrated with liquid biopsy ctDNA monitoring: analytical validation and clinical insightsTran, Nam H. B., Nguyen, Thien‐Phuc Hoang, Bui, Vinh Quang, Le, Vu Thuong, Mai, Trong Khoa, Nguyen Hoang, Van‐Anh, Nguyen, Tien Anh, Nguyen, Minh‐Duc, Pham, Ha‐Hieu, Vo, Tho Thi Le, Ngo, My T. T., Nguyen, Du Quyen, Nguyen, Duy Sinh, Nguyen, Hoai‐Nghia, Phan, Minh‐Duy, Giang, Hoa and Tu, Lan N. (2025). Tumor genomic and transcriptomic analysis integrated with liquid biopsy ctDNA monitoring: analytical validation and clinical insights. Cancer Medicine, 14 (23) e71465, 23. doi: 10.1002/cam4.71465 |
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2025 Journal Article Emergence of a carbapenem-resistant atypical uropathogenic Escherichia coli clone as an increasing cause of urinary tract infectionWalker, Lachlan L., Phan, Minh-Duy, Permana, Budi, Lian, Zheng Jie, Nhu, Nguyen Thi Khanh, Cuddihy, Thom, Peters, Kate M., Ramsay, Kay A., Stewart, Chelsea, Pfennigwerth, Niels, Kidd, Timothy J., Harris, Patrick N. A., Paterson, David L., Sweet, Matthew J., Forde, Brian M. and Schembri, Mark A. (2025). Emergence of a carbapenem-resistant atypical uropathogenic Escherichia coli clone as an increasing cause of urinary tract infection. Nature Communications, 16 (1) 8200, 1-10. doi: 10.1038/s41467-025-63477-0 |
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2025 Journal Article Multimodal analysis of cell-free DNA enhances differentiation of early-stage breast cancer from benign lesions and healthy individualsVan, Thi Tuong Vi, Tran, Trung Hieu, Nguyen, Thi Hue Hanh, Nguyen, Van Thien Chi, Vo, Dac Ho, Nguyen, Giang Thi Huong, Nguyen, Trong Hieu, To, Kim Sang, Nguyen, Anh Luan, Tran, Cao Hong An, Jasmine, Thanh Xuan, Vo, Thi Loan, Nai, Thi Huong Thoang, Tran, Thuy Trang, Truong, My Hoang, Tran, Ngan Chau, Le, Thi Loc, Nguyen, Thi Hong Nhung, Tu, Ngoc Hieu, Tran, Thanh Son, Le, Bao Toan, Tang, Van Phong, Nguyen, Pham Thanh Nhan, Nguyen, Khac Tien, Ho, Van Chien, Nguyen, Xuan Vinh, Doan, Nhu Nhat Tan, Tran, Thi Trang, Tran, Thi Minh Thu ... Tran, Le Son (2025). Multimodal analysis of cell-free DNA enhances differentiation of early-stage breast cancer from benign lesions and healthy individuals. BMC Biology, 23 (1) 259, 1-21. doi: 10.1186/s12915-025-02371-z |
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2025 Journal Article Cost-effective shallow genome-wide sequencing for profiling plasma cfDNA signatures to enhance lung cancer detectionNguyen, Van Thien Chi, Vo, Dac Ho, Tran, Thi Trang, Tran, Thanh Truong, Nguyen, Thi Hue Hanh, Vo, Truong Dang Huy, Van, Thi Tuong Vi, Vu, Thi Luyen, Lam, Minh Quang, Nguyen, Giang Thi Huong, Tran, Trung Hieu, Pham, Ngoc Tan, Trac, Quang Thinh, Nguyen, Trong Hieu, Phan, Thi Van, Dao, Thi Huyen, Nguyen, Huu Tam Phuc, Nguyen, Luu Hong Dang, Nguyen, Duy Sinh, Tang, Hung Sang, Giang, Hoa, Phan, Minh Duy, Nguyen, Hoai-Nghia and Tran, Le Son (2025). Cost-effective shallow genome-wide sequencing for profiling plasma cfDNA signatures to enhance lung cancer detection. Future Oncology, 21 (11), 1391-1402. doi: 10.1080/14796694.2025.2483154 |
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2025 Journal Article Targeting cognitive biases to improve social cognition and social emotional healthBirch, Susan A. J., Stewardson, Charlotte I., Rho, Kate, Kataria, Ashali, Craig, Shannon M., Phan, Minh D. H., Savi, Irene, Voronkova, Kseniia, Lee, Jenny, Choudhary, Gayatri and Torjani, Diba (2025). Targeting cognitive biases to improve social cognition and social emotional health. Frontiers in Psychology, 16 1534125. doi: 10.3389/fpsyg.2025.1534125 |
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2025 Journal Article Characteristics and diversity of Vibrio parahaemolyticus causing acute hepatopancreatic necrosis disease in VietnamHuynh, Tuan-Binh, Mai-Hoang, Thuy-Dung, Bui-Nguyen, Tram-Anh, Ha, Trinh Thi Phuong, Phan, Minh-Duy and Tran-Van, Hieu (2025). Characteristics and diversity of Vibrio parahaemolyticus causing acute hepatopancreatic necrosis disease in Vietnam. Aquaculture and Fisheries, 10 (2), 202-209. doi: 10.1016/j.aaf.2023.10.004 |
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2025 Journal Article Prospective validation study: a non-invasive circulating tumor DNA-based assay for simultaneous early detection of multiple cancers in asymptomatic adultsNguyen, Luu Hong Dang, Nguyen, Thi Hue Hanh, Le, Van Hoi, Bui, Vinh Quang, Nguyen, Lan Hieu, Pham, Nhu Hiep, Phan, Thanh Hai, Nguyen, Huu Thinh, Tran, Van Song, Bui, Chi Viet, Vo, Van Kha, Nguyen, Pham Thanh Nhan, Dang, Ha Huu Phuoc, Pham, Van Dung, Cao, Van Thinh, Phan, Ngoc Minh, Tieu, Ba Linh, Nguyen, Giang Thi Huong, Vo, Dac Ho, Tran, Trung Hieu, Nguyen, Thanh Dat, Nguyen, Van Thien Chi, Nguyen, Trong Hieu, Tran, Vu Uyen, Le, Minh Phong, Tran, Thi Minh Thu, Nguyen Nguyen, Minh, Van, Thi Tuong Vi, Nguyen, Anh Nhu ... Tran, Le Son (2025). Prospective validation study: a non-invasive circulating tumor DNA-based assay for simultaneous early detection of multiple cancers in asymptomatic adults. BMC Medicine, 23 (1) 90. doi: 10.1186/s12916-025-03929-y |
