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2025 Conference Publication DeepRelaxo: A Generalizable Self-supervised Method for Brain R2* MappingPrima, Samiha, Xiong, Zhuang, Wilman, Alan H. and Sun, Hongfu (2025). DeepRelaxo: A Generalizable Self-supervised Method for Brain R2* Mapping. Concord, CA: ISMRM. doi: 10.58530/2025/5144 |
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2024 Journal Article MH2AFormer: An Efficient Multiscale Hierarchical Hybrid Attention With a Transformer for Bladder Wall and Tumor SegmentationLi, Xiang, Wang, Jian, Wei, Haifeng, Cong, Jinyu, Sun, Hongfu, Wang, Pingping and Wei, Benzheng (2024). MH2AFormer: An Efficient Multiscale Hierarchical Hybrid Attention With a Transformer for Bladder Wall and Tumor Segmentation. Ieee Journal of Biomedical and Health Informatics, 28 (8), 4772-4784. doi: 10.1109/JBHI.2024.3397698 |
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2024 Journal Article Accurate location describe and management of lymph node recurrence after esophagectomy for thoracic esophageal squamous cell carcinoma: a retrospective cohort studyZhao, Qian, Sun, Jinglong, Zheng, Feng, Fu, Chengrui, Sun, Hongfu, Liu, Chengxin, Wang, Zhongtang, Huang, Wei, Wang, Ruozheng and Li, Baosheng (2024). Accurate location describe and management of lymph node recurrence after esophagectomy for thoracic esophageal squamous cell carcinoma: a retrospective cohort study. International Journal of Surgery, 110 (6), 3440-3449. doi: 10.1097/JS9.0000000000001242 |
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2024 Conference Publication Fast controllable diffusion models for undersampled MRI reconstructionJiang, Wei, Xiong, Zhuang, Liu, Feng, Ye, Nan and Sun, Hongfu (2024). Fast controllable diffusion models for undersampled MRI reconstruction. 2024 IEEE International Symposium on Biomedical Imaging (ISBI), Athens, Greece, 27-30 May 2024. Piscataway, NJ, United States: IEEE. doi: 10.1109/isbi56570.2024.10635891 |
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2024 Journal Article Quantitative susceptibility mapping through model-based deep image prior (MoDIP)Xiong, Zhuang, Gao, Yang, Liu, Yin, Fazlollahi, Amir, Nestor, Peter, Liu, Feng and Sun, Hongfu (2024). Quantitative susceptibility mapping through model-based deep image prior (MoDIP). NeuroImage, 291 120583, 120583. doi: 10.1016/j.neuroimage.2024.120583 |
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2024 Journal Article Plug-and-Play latent feature editing for orientation-adaptive quantitative susceptibility mapping neural networksGao, Yang, Xiong, Zhuang, Shan, Shanshan, Liu, Yin, Rong, Pengfei, Li, Min, Wilman, Alan H., Pike, G. Bruce, Liu, Feng and Sun, Hongfu (2024). Plug-and-Play latent feature editing for orientation-adaptive quantitative susceptibility mapping neural networks. Medical Image Analysis, 94 103160, 1-11. doi: 10.1016/j.media.2024.103160 |
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2024 Conference Publication QSM Reconstruction of Arbitrary Dipole Orientations using an End-to-end Neural Network via Latent Feature EditingGao, Yang, Xiong, Zhuang, Shan, Shanshan, Li, Min, Wilman, Alan H, Pike, G. Bruce, Liu, Feng and Sun, Hongfu (2024). QSM Reconstruction of Arbitrary Dipole Orientations using an End-to-end Neural Network via Latent Feature Editing. 2024 ISMRM & ISMRT Annual Meeting, Singapore, 4-9 May 2024. Concord, CA United States: ISMRM. doi: 10.58530/2024/2453 |
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2023 Journal Article Do higher radiation doses improve survival for cervical esophageal squamous cell cancer patients treated with definitive chemoradiotherapy using intensity-modulated radiotherapy? A propensity-score matched analysisXie, Feihong, Liu, Tingting, Wang, Xinran, Dong, Jinling, Huang, Wei and Sun, Hongfu (2023). Do higher radiation doses improve survival for cervical esophageal squamous cell cancer patients treated with definitive chemoradiotherapy using intensity-modulated radiotherapy? A propensity-score matched analysis. Journal of Cancer Research and Therapeutics, 19 (6), 1582-1588. doi: 10.4103/jcrt.jcrt_321_23 |
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2023 Journal Article Editorial: Imaging of neurometabolismZheng, Wenbin, Dai, Zhouzhi, Wu, Renhua and Sun, Hongfu (2023). Editorial: Imaging of neurometabolism. Frontiers in Neuroscience, 17 1286361, 1286361. doi: 10.3389/fnins.2023.1286361 |
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2023 Journal Article MapFlow: latent transition via normalizing flow for unsupervised domain adaptationAskari, Hossein, Latif, Yasir and Sun, Hongfu (2023). MapFlow: latent transition via normalizing flow for unsupervised domain adaptation. Machine Learning, 112 (8), 2953-2974. doi: 10.1007/s10994-023-06357-2 |
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2023 Journal Article Increased glymphatic system activity in patients with mild traumatic brain injuryDai, Zhuozhi, Yang, Zhiqi, Li, Zhaolin, Li, Mu, Sun, Hongfu, Zhuang, Zerui, Yang, Weichao, Hu, Zehuan, Chen, Xiaofeng, Lin, Daiying and Wu, Xianheng (2023). Increased glymphatic system activity in patients with mild traumatic brain injury. Frontiers in Neurology, 14 1148878, 1-7. doi: 10.3389/fneur.2023.1148878 |
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2023 Journal Article Distortion‐corrected image reconstruction with deep learning on an MRI‐LinacShan, Shanshan, Gao, Yang, Liu, Paul Z. Y., Whelan, Brendan, Sun, Hongfu, Dong, Bin, Liu, Feng and Waddington, David E. J. (2023). Distortion‐corrected image reconstruction with deep learning on an MRI‐Linac. Magnetic Resonance in Medicine, 90 (3), 1-15. doi: 10.1002/mrm.29684 |
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2023 Journal Article Affine transformation edited and refined deep neural network for quantitative susceptibility mappingXiong, Zhuang, Gao, Yang, Liu, Feng and Sun, Hongfu (2023). Affine transformation edited and refined deep neural network for quantitative susceptibility mapping. NeuroImage, 267 119842, 1-9. doi: 10.1016/j.neuroimage.2022.119842 |
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2023 Conference Publication QSM from the raw phase using an end-to-end neural networkGao, Yang, Xiong, Zhuang, Fazlollahi, Amir, Nestor, Peter, Vegh, Viktor, Pike, G. Bruce, Crozier, Stuart, Liu, Feng and Sun, Hongfu (2023). QSM from the raw phase using an end-to-end neural network. ISMRM Annual Meeting, London, United Kingdom, 7-12 May 2022. Berkeley, CA, United States: International Society for Magnetic Resonance in Medicine. doi: 10.58530/2022/4740 |
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2022 Journal Article Quantitative susceptibility mapping changes relate to gait issues in Parkinson’s DiseaseNathoo, Nabeela, Gee, Myrlene, Nelles, Krista, Burt, Jacqueline, Sun, Hongfu, Seres, Peter, Wilman, Alan H., Beaulieu, Christian, Ba, Fang and Camicioli, Richard (2022). Quantitative susceptibility mapping changes relate to gait issues in Parkinson’s Disease. Canadian Journal of Neurological Sciences, 50 (6) PII S031716712200316X, 1-8. doi: 10.1017/cjn.2022.316 |
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2022 Journal Article Detecting monocyte trafficking in an animal model of glioblastoma using R2* and quantitative susceptibility mappingYang, Runze, Hamilton, A. Max, Sun, Hongfu, Rawji, Khalil S., Sarkar, Susobhan, Mirzaei, Reza, Pike, G. Bruce, Yong, V. Wee. and Dunn, Jeff F. (2022). Detecting monocyte trafficking in an animal model of glioblastoma using R2* and quantitative susceptibility mapping. Cancer Immunology, Immunotherapy, 72 (3), 733-742. doi: 10.1007/s00262-022-03297-z |
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2022 Journal Article Quantitative susceptibility-weighted imaging in presence of strong susceptibility sources: application to hemorrhageDe, Ashmita, Sun, Hongfu, Emery, Derek J., Butcher, Kenneth S. and Wilman, Alan H. (2022). Quantitative susceptibility-weighted imaging in presence of strong susceptibility sources: application to hemorrhage. Magnetic Resonance Imaging, 92, 224-231. doi: 10.1016/j.mri.2022.06.010 |
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2022 Journal Article Instant tissue field and magnetic susceptibility mapping from MRI raw phase using Laplacian enhanced deep neural networksGao, Yang, Xiong, Zhuang, Fazlollahi, Amir, Nestor, Peter J., Vegh, Viktor, Nasrallah, Fatima, Winter, Craig, Pike, G. Bruce, Crozier, Stuart, Liu, Feng and Sun, Hongfu (2022). Instant tissue field and magnetic susceptibility mapping from MRI raw phase using Laplacian enhanced deep neural networks. NeuroImage, 259 119410, 1-13. doi: 10.1016/j.neuroimage.2022.119410 |
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2022 Journal Article Brain volume and magnetic susceptibility differences in children and adolescents with prenatal alcohol exposureNakhid, Daphne, McMorris, Carly, Sun, Hongfu, Gibbard, William Benton, Tortorelli, Christina and Lebel, Catherine (2022). Brain volume and magnetic susceptibility differences in children and adolescents with prenatal alcohol exposure. Alcoholism: Clinical and Experimental Research, 46 (10), 1797-1807. doi: 10.1111/acer.14928 |
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2022 Journal Article BFRnet: A deep learning-based MR background field removal method for QSM of the brain containing significant pathological susceptibility sourcesZhu, Xuanyu, Gao, Yang, Liu, Feng, Crozier, Stuart and Sun, Hongfu (2022). BFRnet: A deep learning-based MR background field removal method for QSM of the brain containing significant pathological susceptibility sources. Zeitschrift fur Medizinische Physik, 33 (4), 578-590. doi: 10.1016/j.zemedi.2022.08.001 |
