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2015 Journal Article Standards for plant synthetic biology: A common syntax for exchange of DNA partsPatron, Nicola J., Orzaez, Diego, Marillonnet, Sylvestre, Warzecha, Heribert, Matthewman, Colette, Youles, Mark, Raitskin, Oleg, Leveau, Aymeric, Farré, Gemma, Rogers, Christian, Smith, Alison, Hibberd, Julian, Webb, Alex A.R., Locke, James, Schornack, Sebastian, Ajioka, Jim, Baulcombe, David C., Zipfel, Cyril, Kamoun, Sophien, Jones, Jonathan D.G., Kuhn, Hannah, Robatzek, Silke, Van Esse, H. Peter, Sanders, Dale, Oldroyd, Giles, Martin, Cathie, Field, Rob, O'Connor, Sarah, Fox, Samantha ... Haseloff, Jim (2015). Standards for plant synthetic biology: A common syntax for exchange of DNA parts. New Phytologist, 208 (1), 13-19. doi: 10.1111/nph.13532 |
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2015 Journal Article Nitrogen-Fixing Nodules Are an Important Source of Reduced Sulfur, Which Triggers Global Changes in Sulfur Metabolism in Lotus japonicusKalloniati, Chrysanthi, Krompas, Panagiotis, Karalias, Georgios, Udvardi, Michael K., Rennenberg, Heinz, Herschbach, Cornelia and Flemetakis, Emmanouil (2015). Nitrogen-Fixing Nodules Are an Important Source of Reduced Sulfur, Which Triggers Global Changes in Sulfur Metabolism in Lotus japonicus. The Plant Cell, 27 (9), 2384-2400. doi: 10.1105/tpc.15.00108 |
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2015 Journal Article Targeted switchgrass BAC library screening and sequence analysis identifies predicted biomass and stress response-related genesSharma, Manoj K., Sharma, Rita, Cao, Peijian, Harkenrider, Mitch, Jenkins, Jerry, Grimwood, Jane, Zhang, Jiyi, Udvardi, Michael K., Schmutz, Jeremy and Ronald, Pamela C. (2015). Targeted switchgrass BAC library screening and sequence analysis identifies predicted biomass and stress response-related genes. BioEnergy Research, 9 (1), 109-122. doi: 10.1007/s12155-015-9667-1 |
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2015 Journal Article Global gene expression profiling of two switchgrass cultivars following inoculation with Burkholderia phytofirmans strain PsJNLara-Chavez, Alejandra, Lowman, Scott, Kim, Seonhwa, Tang, Yuhong, Zhang, Jiyi, Udvardi, Michael, Nowak, Jerzy, Flinn, Barry and Mei, Chuansheng (2015). Global gene expression profiling of two switchgrass cultivars following inoculation with Burkholderia phytofirmans strain PsJN. Journal of Experimental Botany, 66 (14), 4337-4350. doi: 10.1093/jxb/erv096 |
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2015 Journal Article Identification and overexpression of gibberellin 2-oxidase (GA2ox) in switchgrass (Panicum virgatum L.) for improved plant architecture and reduced biomass recalcitranceWuddineh, Wegi A., Mazarei, Mitra, Zhang, Jiyi, Poovaiah, Charleson R., Mann, David G. J., Ziebell, Angela, Sykes, Robert W., Davis, Mark F., Udvardi, Michael K. and Stewart, Charles Neal (2015). Identification and overexpression of gibberellin 2-oxidase (GA2ox) in switchgrass (Panicum virgatum L.) for improved plant architecture and reduced biomass recalcitrance. Plant Biotechnology Journal, 13 (5), 636-647. doi: 10.1111/pbi.12287 |
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2015 Journal Article Medicago truncatula natural resistance-associated macrophage Protein1 is required for iron uptake by rhizobia-infected nodule cellsTejada-Jiménez, Manuel, Castro-Rodríguez, Rosario, Kryvoruchko, Igor, Lucas, M. Mercedes, Udvardi, Michael, Imperial, Juan and González-Guerrero, Manuel (2015). Medicago truncatula natural resistance-associated macrophage Protein1 is required for iron uptake by rhizobia-infected nodule cells. Plant Physiology, 168 (1), 258-272. doi: 10.1104/pp.114.254672 |
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2015 Journal Article Suppression of arbuscule degeneration in Medicago truncatula phosphate transporter4 mutants is dependent on the ammonium transporter 2 family protein AMT2;3Breuillin-Sessoms, Florence, Floss, Daniela S., Karen Gomez, S., Pumplin, Nathan, Ding, Yi, Levesque-Tremblay, Veronique, Noar, Roslyn D., Daniels, Dierdra A., Bravo, Armando, Eaglesham, James B., Benedito, Vagner A., Udvardi, Michael K. and Harrison, Maria J. (2015). Suppression of arbuscule degeneration in Medicago truncatula phosphate transporter4 mutants is dependent on the ammonium transporter 2 family protein AMT2;3. Plant Cell, 27 (4), 1352-1366. doi: 10.1105/tpc.114.131144 |
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2015 Journal Article DASH transcription factor impacts Medicago truncatula seed size by its action on embryo morphogenesis and auxin homeostasisNoguero, Mélanie, Le Signor, Christine, Vernoud, Vanessa, Bandyopadhyay, Kaustav, Sanchez, Myriam, Fu, Chunxiang, Torres-Jerez, Ivone, Wen, Jiangqi, Mysore, Kirankumar S, Gallardo, Karine, Udvardi, Michael, Thompson, Richard and Verdier, Jerome (2015). DASH transcription factor impacts Medicago truncatula seed size by its action on embryo morphogenesis and auxin homeostasis. The Plant Journal, 81 (3), 453-466. doi: 10.1111/tpj.12742 |
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2015 Book Chapter Functional Genomics of Symbiotic Nitrogen Fixation in Legumes with a Focus on Transcription Factors and Membrane TransportersSinharoy, Senjuti, Kryvoruchko, Igor S., Pislariu, Catalina I., González-Guerrero, Manuel, Benedito, Vagner A. and Udvardi, Michael K. (2015). Functional Genomics of Symbiotic Nitrogen Fixation in Legumes with a Focus on Transcription Factors and Membrane Transporters. Biological Nitrogen Fixation. (pp. 823-836) Wiley Blackwell. doi: 10.1002/9781119053095.ch82 |
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2015 Journal Article A high-throughput rna interference (RNAI)-Based approach using hairy roots for the study of plant–Rhizobia interactionsSinharoy, Senjuti, Pislariu, Catalina I. and Udvardi, Michael K. (2015). A high-throughput rna interference (RNAI)-Based approach using hairy roots for the study of plant–Rhizobia interactions. Methods in Molecular Biology, 1287, 159-178. doi: 10.1007/978-1-4939-2453-0_12 |
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2015 Book Chapter Retrotransposon (Tnt1)-Insertion Mutagenesis in Medicago as a Tool for Genetic Dissection of Symbiosis in LegumesPislariu, Catalina I., Sinharoy, Senjuti, Wen, Jiangqi, Murray, Jeremy D., Ratet, Pascal and Udvardi, Michael K. (2015). Retrotransposon (Tnt1)-Insertion Mutagenesis in Medicago as a Tool for Genetic Dissection of Symbiosis in Legumes. Biological Nitrogen Fixation. (pp. 837-854) Wiley Blackwell. doi: 10.1002/9781119053095.ch83 |
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2015 Book Chapter Functional Genomics of Symbiotic Nitrogen Fixation in Legumes with a Focus on Transcription Factors and Membrane TransportersSinharoy, Senjuti, Kryvoruchko, Igor S., Pislariu, Catalina I., Gonzalez-Guerrero, Manuel, Benedito, Vagner A. and Udvardi, Michael K. (2015). Functional Genomics of Symbiotic Nitrogen Fixation in Legumes with a Focus on Transcription Factors and Membrane Transporters. Biological Nitrogen Fixation. (pp. 823-836) edited by DeBruijn, FJ. Hoboken, NJ United States: John Wiley & Sons. |
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2015 Journal Article PvNAC1 and PvNAC2 Are Associated with Leaf Senescence and Nitrogen Use Efficiency in SwitchgrassYang, Jiading, Worley, Eric, Torres-Jerez, Ivone, Miller, Randall, Wang, Mingyi, Fu, Chunxiang, Wang, Zeng-Yu, Tang, Yuhong and Udvardi, Michael (2015). PvNAC1 and PvNAC2 Are Associated with Leaf Senescence and Nitrogen Use Efficiency in Switchgrass. BioEnergy Research, 8 (2), 868-880. doi: 10.1007/s12155-014-9566-x |
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2015 Book Chapter Retrotransposon (Tnt1)-Insertion Mutagenesis in Medicago as a Tool for Genetic Dissection of Symbiosis in LegumesPislariu, Catalina I., Sinharoy, Senjuti, Wen, JiangQi, Murray, Jeremy D., Ratet, Pascal and Udvardi, Michael K. (2015). Retrotransposon (Tnt1)-Insertion Mutagenesis in Medicago as a Tool for Genetic Dissection of Symbiosis in Legumes. Biological Nitrogen Fixation. (pp. 837-853) edited by DeBruijn, FJ. Hoboken, NJ United States: John Wiley & Sons. |
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2014 Journal Article Control of vegetative to reproductive phase transition improves biomass yield and simultaneously reduces lignin content in Medicago truncatulaTadege, Million, Chen, Fang, Murray, Jeremy, Wen, Jiangqi, Ratet, Pascal, Udvardi, Michael K., Dixon, Richard A. and Mysore, Kirankumar S. (2014). Control of vegetative to reproductive phase transition improves biomass yield and simultaneously reduces lignin content in Medicago truncatula. BioEnergy Research, 8 (2), 857-867. doi: 10.1007/s12155-014-9565-y |
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2014 Journal Article A NAP-AAO3 Regulatory Module Promotes Chlorophyll Degradation via ABA Biosynthesis in Arabidopsis LeavesYang, Jiading, Worley, Eric and Udvardi, Michael (2014). A NAP-AAO3 Regulatory Module Promotes Chlorophyll Degradation via ABA Biosynthesis in Arabidopsis Leaves. The Plant Cell, 26 (12), 4862-4874. doi: 10.1105/tpc.114.133769 |
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2014 Journal Article Global reprogramming of transcription and metabolism in Medicago truncatula during progressive drought and after rewateringZhang, Ji-Yi, Cruz DE Carvalho, Maria H., Torres-Jerez, Ivone, Kang, Yun, Allen, Stacy N., Huhman, David V., Tang, Yuhong, Murray, Jeremy, Sumner, Lloyd W. and Udvardi, Michael K. (2014). Global reprogramming of transcription and metabolism in Medicago truncatula during progressive drought and after rewatering. Plant, Cell & Environment, 37 (11), 2553-76. doi: 10.1111/pce.12328 |
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2014 Journal Article Diversity of nitrogen-fixing bacteria associated with switchgrass in the native tallgrass prairie of northern OklahomaBahulikar, Rahul A., Torres-Jerez, Ivone, Worley, Eric, Craven, Kelly and Udvardi, Michael K. (2014). Diversity of nitrogen-fixing bacteria associated with switchgrass in the native tallgrass prairie of northern Oklahoma. Applied and Environmental Microbiology, 80 (18), 5636-5643. doi: 10.1128/AEM.02091-14 |
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2014 Journal Article Extreme specificity of NCR gene expression in Medicago truncatulaGuefrachi, Ibtissem, Nagymihaly, Marianna, Pislariu, Catalina I., Van de Velde, Willem, Ratet, Pascal, Mars, Mohamed, Udvardi, Michael K., Kondorosi, Eva, Mergaert, Peter and Alunni, Benoît (2014). Extreme specificity of NCR gene expression in Medicago truncatula. BMC Genomics, 15 (1) 712. doi: 10.1186/1471-2164-15-712 |
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2014 Journal Article Keel petal incision: a simple and efficient method for genetic crossing in Medicago truncatulaVeerappan, Vijaykumar, Kadel, Khem, Alexis, Naudin, Scott, Ashley, Kryvoruchko, Igor, Sinharoy, Senjuti, Taylor, Mark, Udvardi, Michael and Dickstein, Rebecca (2014). Keel petal incision: a simple and efficient method for genetic crossing in Medicago truncatula. Plant Methods, 10 (1) 11. doi: 10.1186/1746-4811-10-11 |
