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2014 Journal Article The H+-ATPase HA1 of Medicago truncatula is essential for phosphate transport and plant growth during arbuscular mycorrhizal symbiosisKrajinski, Franziska, Courty, Pierre-Emmanuel, Sieh, Daniela, Franken, Philipp, Zhang, Haoqiang, Bucher, Marcel, Gerlach, Nina, Kryvoruchko, Igor, Zoeller, Daniela, Udvardi, Michael and Hause, Bettina (2014). The H+-ATPase HA1 of Medicago truncatula is essential for phosphate transport and plant growth during arbuscular mycorrhizal symbiosis. The Plant Cell, 26 (4), 1808-1817. doi: 10.1105/tpc.113.120436 |
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2014 Journal Article An efficient reverse genetics platform in the model legume Medicago truncatulaCheng, Xiaofei, Wang, Mingyi, Lee, Hee-Kyung, Tadege, Million, Ratet, Pascal, Udvardi, Michael, Mysore, Kirankumar S. and Wen, Jiangqi (2014). An efficient reverse genetics platform in the model legume Medicago truncatula. New Phytologist, 201 (3), 1065-1076. doi: 10.1111/nph.12575 |
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2014 Book Chapter A Tutorial on Lotus japonicus Transcriptomic ToolsVerdier, Jerome, Bandyopadhyay, Kaustav and Udvardi, Michael (2014). A Tutorial on Lotus japonicus Transcriptomic Tools. Lotus Japonicus Genome. (pp. 183-199) edited by Tabata, S and Stougaard, J. Berlin, Germany: Springer. doi: 10.1007/978-3-662-44270-8_17 |
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2014 Journal Article Lignin modification leads to increased nodule numbers in AlfalfaGallego-Giraldo, Lina, Bhattarai, Kishor, Pislariu, Catalina I., Nakashima, Jin, Jikumaru, Yusuke, Kamiya, Yuji, Udvardi, Michael K., Monteros, Maria J. and Dixon, Richard A. (2014). Lignin modification leads to increased nodule numbers in Alfalfa. Plant Physiology, 164 (3), 1139-1150. doi: 10.1104/pp.113.232421 |
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2013 Journal Article PlantTFcat: An online plant transcription factor and transcriptional regulator categorization and analysis toolDai, Xinbin, Sinharoy, Senjuti, Udvardi, Michael and Zhao, Patrick X. (2013). PlantTFcat: An online plant transcription factor and transcriptional regulator categorization and analysis tool. BMC Bioinformatics, 14 (1) 321. doi: 10.1186/1471-2105-14-321 |
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2013 Journal Article A regulatory network-based approach dissects late maturation processes related to the acquisition of desiccation tolerance and longevity of Medicago truncatula seedsVerdier, Jerome, Lalanne, David, Pelletier, Sandra, Torres-Jerez, Ivone, Righetti, Karima, Bandyopadhyay, Kaustav, Leprince, Olivier, Chatelain, Emilie, Vu, Benoit Ly, Gouzy, Jerome, Gamas, Pascal, Udvardi, Michael K. and Buitink, Julia (2013). A regulatory network-based approach dissects late maturation processes related to the acquisition of desiccation tolerance and longevity of Medicago truncatula seeds. Plant Physiology, 163 (2), 757-774. doi: 10.1104/pp.113.222380 |
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2013 Journal Article The C2H2 Transcription Factor REGULATOR OF SYMBIOSOME DIFFERENTIATION Represses Transcription of the Secretory Pathway Gene VAMP721a and Promotes Symbiosome Development in Medicago truncatulaSinharoy, Senjuti, Torres-Jerez, Ivone, Bandyopadhyay, Kaustav, Kereszt, Attila, Pislariu, Catalina I., Nakashima, Jin, Benedito, Vagner A., Kondorosi, Eva and Udvardi, Michael K. (2013). The C2H2 Transcription Factor REGULATOR OF SYMBIOSOME DIFFERENTIATION Represses Transcription of the Secretory Pathway Gene VAMP721a and Promotes Symbiosome Development in Medicago truncatula. The Plant Cell, 25 (9), 3584-3601. doi: 10.1105/tpc.113.114017 |
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2013 Journal Article Transcriptomic and metabolic changes associated with photorespiratory ammonium accumulation in the model legume Lotus japonicusPérez-Delgado, Carmen M., García-Calderón, Margarita, Sánchez, Diego H., Udvardi, Michael K., Kopka, Joachim, Márquez, Antonio J. and Betti, Marco (2013). Transcriptomic and metabolic changes associated with photorespiratory ammonium accumulation in the model legume Lotus japonicus. Plant Physiology, 162 (4), 1834-1848. doi: 10.1104/pp.113.217216 |
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2013 Journal Article LegumeGRN: a gene regulatory network prediction server for functional and comparative studiesWang, Mingyi, Verdier, Jerome, Benedito, Vagner A, Tang, Yuhong, Murray, Jeremy D, Ge, Yinbing, Becker, Jörg D, Carvalho, Helena, Rogers, Christian, Udvardi, Michael and He, Ji (2013). LegumeGRN: a gene regulatory network prediction server for functional and comparative studies. PloS One, 8 (7) e67434. doi: 10.1371/journal.pone.0067434 |
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2013 Conference Publication Improved biomass and altered transcriptome in Medicago truncatula as a result of intra/intercellular colonization by the mycorrhiza Sebacina vermiferaMathioni, S. M., Shoji, J., Webb, S. L., Kryvoruchko, I., Pislariu, C., Udvardi, M., Blancaflor, E., Tang, Y. and Craven, K. D. (2013). Improved biomass and altered transcriptome in Medicago truncatula as a result of intra/intercellular colonization by the mycorrhiza Sebacina vermifera. APS-MSA Joint Meeting, Austin Tx, Aug 10-14, 2013. ST PAUL: AMER PHYTOPATHOLOGICAL SOC. |
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2013 Journal Article Rhizobial infection is associated with the development of peripheral vasculature in nodules of Medicago truncatulaGuan, Dian, Stacey, Nicola, Liu, Chengwu, Wen, Jiangqi, Mysore, Kirankumar S., Torres-Jerez, Ivone, Vernié, Tatiana, Tadege, Million, Zhou, Chuanen, Wang, Zeng-yu, Udvardi, Michael K., Oldroyd, Giles E. D. and Murray, Jeremy D. (2013). Rhizobial infection is associated with the development of peripheral vasculature in nodules of Medicago truncatula. Plant Physiology, 162 (1), 107-115. doi: 10.1104/pp.113.215111 |
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2013 Journal Article Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.)Zhang, Ji-Yi, Lee, Yi-Ching, Torres-Jerez, Ivone, Wang, Mingyi, Yin, Yanbin, Chou, Wen-Chi, He, Ji, Shen, Hui, Srivastava, Avinash C., Pennacchio, Christa, Lindquist, Erika, Grimwood, Jane, Schmutz, Jeremy, Xu, Ying, Sharma, Manoj, Sharma, Rita, Bartley, Laura E., Ronald, Pamela C., Saha, Malay C., Dixon, Richard A., Tang, Yuhong and Udvardi, Michael K. (2013). Development of an integrated transcript sequence database and a gene expression atlas for gene discovery and analysis in switchgrass (Panicum virgatum L.). Plant Journal, 74 (1), 160-173. doi: 10.1111/tpj.12104 |
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2013 Journal Article Transport and metabolism in legume-rhizobia symbiosesUdvardi, Michael and Poole, Philip S. (2013). Transport and metabolism in legume-rhizobia symbioses. Annual Review of Plant Biology, 64, 781-805. doi: 10.1146/annurev-arplant-050312-120235 |
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2013 Journal Article Establishment of the Lotus japonicus Gene Expression Atlas (LjGEA) and its use to explore legume seed maturationVerdier, Jerome, Torres-Jerez, Ivone, Wang, Mingyi, Andriankaja, Andry, Allen, Stacy N., He, Ji, Tang, Yuhong, Murray, Jeremy D. and Udvardi, Michael K. (2013). Establishment of the Lotus japonicus Gene Expression Atlas (LjGEA) and its use to explore legume seed maturation. Plant Journal, 74 (2), 351-362. doi: 10.1111/tpj.12119 |
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2013 Journal Article Medicago truncatula DNF2 is a PI-PLC-XD-containing protein required for bacteroid persistence and prevention of nodule early senescence and defense-like reactionsBourcy, Marie, Brocard, Lysiane, Pislariu, Catalina I., Cosson, Viviane, Mergaert, Peter, Tadege, Millon, Mysore, Kirankumar S., Udvardi, Michael K., Gourion, Benjamin and Ratet, Pascal (2013). Medicago truncatula DNF2 is a PI-PLC-XD-containing protein required for bacteroid persistence and prevention of nodule early senescence and defense-like reactions. New Phytologist, 197 (4), 1250-1261. doi: 10.1111/nph.12091 |
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2013 Journal Article Cessation of photosynthesis in Lotus japonicus leaves leads to reprogramming of nodule metabolismTsikou, Daniela, Kalloniati, Chrysanthi, Fotelli, Mariangela N., Nikolopoulos, Dimosthenis, Katinakis, Panagiotis, Udvardi, Michael K., Rennenberg, Heinz and Flemetakis, Emmanouil (2013). Cessation of photosynthesis in Lotus japonicus leaves leads to reprogramming of nodule metabolism. Journal of Experimental Botany, 64 (5), 1317-1332. doi: 10.1093/jxb/ert015 |
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2012 Journal Article Overexpression of AtLOV1 in Switchgrass Alters Plant Architecture, Lignin Content, and Flowering TimeXu, Bin, Sathitsuksanoh, Noppadon, Tang, Yuhong, Udvardi, Michael K., Zhang, Ji-Yi, Shen, Zhengxing, Balota, Maria, Harich, Kim, Zhang, Percival Y.-H. and Zhao, Bingyu (2012). Overexpression of AtLOV1 in Switchgrass Alters Plant Architecture, Lignin Content, and Flowering Time. PLoS ONE, 7 (12) e47399. doi: 10.1371/journal.pone.0047399 |
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2012 Journal Article Ascorbate oxidase: the unexpected involvement of a 'wasteful enzyme' in the symbioses with nitrogen-fixing bacteria and arbuscular mycorrhizal fungiBalestrini, Raffaella, Ott, Thomas, Güther, Mike, Bonfante, Paola, Udvardi, Michael K. and De Tullio, Mario C. (2012). Ascorbate oxidase: the unexpected involvement of a 'wasteful enzyme' in the symbioses with nitrogen-fixing bacteria and arbuscular mycorrhizal fungi. Plant Physiology and Biochemistry : PPB, 59, 71-79. doi: 10.1016/j.plaphy.2012.07.006 |
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2012 Journal Article Global regulation of reactive oxygen species scavenging genes in alfalfa root and shoot under gradual drought stress and recoveryKang, Yun and Udvardi, Michael (2012). Global regulation of reactive oxygen species scavenging genes in alfalfa root and shoot under gradual drought stress and recovery. Plant Signaling and Behavior, 7 (5), 539-543. doi: 10.4161/psb.19780 |
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2012 Journal Article MtPAR MYB transcription factor acts as an on switch for proanthocyanidin biosynthesis in Medicago truncatulaVerdier, Jerome, Zhao, Jian, Torres-Jerez, Ivone, Ge, Shujun, Liu, Chenggang, He, Xianzhi, Mysore, Kirankumar S., Dixon, Richard A. and Udvardi, Michael K. (2012). MtPAR MYB transcription factor acts as an on switch for proanthocyanidin biosynthesis in Medicago truncatula. Proceedings of the National Academy of Sciences of the United States of America, 109 (5), 1766-1771. doi: 10.1073/pnas.1120916109 |
