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2021 Journal Article An efficient Brome mosaic virus-based gene silencing protocol for hexaploid wheat (Triticum aestivum L.)Wang, Yongqin, Chai, Chenglin, Khatabi, Behnam, Scheible, Wolf-Rüdiger, Udvardi, Michael K. and Saha, Malay C. (2021). An efficient Brome mosaic virus-based gene silencing protocol for hexaploid wheat (Triticum aestivum L.). Frontiers in Plant Science, 12 685187. doi: 10.3389/fpls.2021.685187 |
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2021 Journal Article A research road map for responsible use of agricultural nitrogenUdvardi, Michael, Below, Frederick E., Castellano, Michael J., Eagle, Alison J., Giller, Ken E., Ladha, Jagdish Kumar, Liu, Xuejun, Maaz, Tai McClellan, Nova-Franco, Barbara, Raghuram, Nandula, Robertson, G. Philip, Roy, Sonali, Saha, Malay, Schmidt, Susanne, Tegeder, Mechthild, York, Larry M. and Peters, John W. (2021). A research road map for responsible use of agricultural nitrogen. Frontiers in Sustainable Food Systems, 5 660155. doi: 10.3389/fsufs.2021.660155 |
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2021 Journal Article Draft genome sequences of switchgrass diazotrophsJones, Lauren B., Myoung-Hwan, Chi, Lakshmanan, Venkatacha, Torres-Jerez, Ivone, Tang, Yuhong, Sparks, Maira, Shapiro, Nicole R., Craven, Kelly D. and Udvardi, Michael K. (2021). Draft genome sequences of switchgrass diazotrophs. Microbiology Resource Announcements, 10 (21) e00284. doi: 10.1128/mra.00284-21 |
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2021 Journal Article The development of bacteriophage resistance in Vibrio alginolyticus depends on a complex metabolic adaptation strategySkliros, Dimitrios, Kalatzis, Panos G., Kalloniati, Chrysanthi, Komaitis, Fotios, Papathanasiou, Sokratis, Kouri, Evangelia D., Udvardi, Michael K., Kokkari, Constantina, Katharios, Pantelis and Flemetakis, Emmanouil (2021). The development of bacteriophage resistance in Vibrio alginolyticus depends on a complex metabolic adaptation strategy. Viruses, 13 (4) 656, 656. doi: 10.3390/v13040656 |
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2021 Journal Article Improved node culture methods for rapid vegetative propagation of switchgrass (Panicum virgatum L.)Wang, Yongqin, Dong, Weihong, Saha, Malay C., Udvardi, Michael K. and Kang, Yun (2021). Improved node culture methods for rapid vegetative propagation of switchgrass (Panicum virgatum L.). BMC plant biology, 21 (1) 128. doi: 10.1186/s12870-021-02903-z |
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2021 Journal Article Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrassLovell, John T., MacQueen, Alice H., Mamidi, Sujan, Bonnette, Jason, Jenkins, Jerry, Napier, Joseph D., Sreedasyam, Avinash, Healey, Adam, Session, Adam, Shu, Shengqiang, Barry, Kerrie, Bonos, Stacy, Boston, LoriBeth, Daum, Christopher, Deshpande, Shweta, Ewing, Aren, Grabowski, Paul P., Haque, Taslima, Harrison, Melanie, Jiang, Jiming, Kudrna, Dave, Lipzen, Anna, Pendergast, Thomas H., Plott, Chris, Qi, Peng, Saski, Christopher A., Shakirov, Eugene V., Sims, David, Sharma, Manoj ... Schmutz, Jeremy (2021). Genomic mechanisms of climate adaptation in polyploid bioenergy switchgrass. Nature, 590 (7846), 438-444. doi: 10.1038/s41586-020-03127-1 |
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2021 Journal Article Distinguishing HapMap accessions through recursive set partitioning in hierarchical decision treesZhang, Wenchao, Kang, Yun, Cheng, Xiaofei, Wen, Jiangqi, Zhang, Hongying, Torres-Jerez, Ivone, Krom, Nick, Udvardi, Michael K., Scheible, Wolf-Rüdiger and Zhao, Patrick Xuechun (2021). Distinguishing HapMap accessions through recursive set partitioning in hierarchical decision trees. Frontiers in Plant Science, 12 628421. doi: 10.3389/fpls.2021.628421 |
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2021 Journal Article Corrigendum: A Plant Gene Encoding One-Heme and Two-Heme Hemoglobins With Extreme Reactivities Toward Diatomic Gases and Nitrite (Front. Plant Sci, (2020), 11, (600336), 10.3389/fpls.2020.600336)Villar, Irene, Larrainzar, Estíbaliz, Milazzo, Lisa, Pérez-Rontomé, Carmen, Rubio, Maria C., Smulevich, Giulietta, Martínez, Jesús I., Wilson, Michael T., Reeder, Brandon, Huertas, Raul, Abbruzzetti, Stefania, Udvardi, Michael and Becana, Manuel (2021). Corrigendum: A Plant Gene Encoding One-Heme and Two-Heme Hemoglobins With Extreme Reactivities Toward Diatomic Gases and Nitrite (Front. Plant Sci, (2020), 11, (600336), 10.3389/fpls.2020.600336). Frontiers in Plant Science, 11 637797. doi: 10.3389/fpls.2020.637797 |
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2021 Journal Article PHO1 family members transport phosphate from infected nodule cells to bacteroids in Medicago truncatulaNguyen, Nga N. T., Clua, Joaquin, Vetal, Pallavi V., Vuarambon, Dominique Jacques, De Bellis, Damien, Pervent, Marjorie, Lepetit, Marc, Udvardi, Michael, Valentine, Alexander J. and Poirier, Yves (2021). PHO1 family members transport phosphate from infected nodule cells to bacteroids in Medicago truncatula. Plant Physiology, 185 (1), 196-209. doi: 10.1093/plphys/kiaa016 |
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2021 Journal Article Nitrogen fertilization reduces nitrogen fixation activity of diverse diazotrophs in switchgrass rootsBahulikar, Rahul A., Chaluvadi, Srinivasa R., Torres-Jerez, Ivone, Mosali, Jagadish, Bennetzen, Jeffrey L. and Udvardi, Michael (2021). Nitrogen fertilization reduces nitrogen fixation activity of diverse diazotrophs in switchgrass roots. Phytobiomes Journal, 5 (1), 80-87. doi: 10.1094/pbiomes-09-19-0050-fi |
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2021 Journal Article Transcriptional, metabolic, physiological and developmental responses of switchgrass to phosphorus limitationDing, Na, Huertas, Raul, Torres‐Jerez, Ivone, Liu, Wei, Watson, Bonnie, Scheible, Wolf‐Rüdiger and Udvardi, Michael (2021). Transcriptional, metabolic, physiological and developmental responses of switchgrass to phosphorus limitation. Plant, Cell and Environment, 44 (1), 186-202. doi: 10.1111/pce.13872 |
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2020 Journal Article Lotus japonicus karrikin receptors display divergent ligand-binding specificities and organ-dependent redundancyCarbonnel, Samy, Torabi, Salar, Griesmann, Maximilian, Bleek, Elias, Tang, Yuhong, Buchka, Stefan, Basso, Veronica, Shindo, Mitsuru, Boyer, François-Didier, Wang, Trevor L., Udvardi, Michael, Waters, Mark T. and Gutjahr, Caroline (2020). Lotus japonicus karrikin receptors display divergent ligand-binding specificities and organ-dependent redundancy. PLoS Genetics, 16 (12 December) e1009249, e1009249. doi: 10.1371/journal.pgen.1009249 |
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2020 Journal Article GmVTL1a is an iron transporter on the symbiosome membrane of soybean with an important role in nitrogen fixationBrear, Ella M., Bedon, Frank, Gavrin, Aleksandr, Kryvoruchko, Igor S., Torres-Jerez, Ivone, Udvardi, Michael K., Day, David A. and Smith, Penelope M. C. (2020). GmVTL1a is an iron transporter on the symbiosome membrane of soybean with an important role in nitrogen fixation. New Phytologist, 228 (2), 667-681. doi: 10.1111/nph.16734 |
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2020 Journal Article Silencing Folylpolyglutamate Synthetase1 (FPGS1) in Switchgrass (Panicum virgatum L.) improves lignocellulosic biofuel productionMazarei, Mitra, Baxter, Holly L., Srivastava, Avinash, Li, Guifen, Xie, Hongli, Dumitrache, Alexandru, Rodriguez, Miguel, Natzke, Jace M., Zhang, Ji-Yi, Turner, Geoffrey B., Sykes, Robert W., Davis, Mark F., Udvardi, Michael K., Wang, Zeng-Yu, Davison, Brian H., Blancaflor, Elison B., Tang, Yuhong and Stewart, Charles Neal (2020). Silencing Folylpolyglutamate Synthetase1 (FPGS1) in Switchgrass (Panicum virgatum L.) improves lignocellulosic biofuel production. Frontiers in Plant Science, 11 843. doi: 10.3389/fpls.2020.00843 |
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2020 Journal Article MtSSPdb: the Medicago truncatula small secreted peptide database1[OPEN]Boschiero, Clarissa, Dai, Xinbin, Lundquist, Peter Knut, Roy, Sonali, Christian de Bang, Thomas, Zhang, Shulan, Zhuang, Zhaohong, Torres-Jerez, Ivone, Udvardi, Michael K., Scheible, Wolf-Rüdiger and Zhao, Patrick Xuechun (2020). MtSSPdb: the Medicago truncatula small secreted peptide database1[OPEN]. Plant Physiology, 183 (1), 399-413. doi: 10.1104/pp.19.01088 |
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2020 Journal Article Transcriptomic and metabolomic adaptation of Nannochloropsis gaditana grown under different light regimesPatelou, Maria, Infante, Carlos, Dardelle, Flavien, Randewig, Dörte, Kouri, Evangelia D., Udvardi, Michael K., Tsiplakou, Eleni, Mantecón, Lalia and Flemetakis, Emmanouil (2020). Transcriptomic and metabolomic adaptation of Nannochloropsis gaditana grown under different light regimes. Algal Research, 45 101735. doi: 10.1016/j.algal.2019.101735 |
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2019 Journal Article The future of legume genetic data resources: challenges, opportunities, and prioritiesBauchet, Guillaume J., Bett, Kirstin E., Cameron, Connor T., Campbell, Jacqueline D., Cannon, Ethalinda K. S., Cannon, Steven B., Carlson, Joseph W., Chan, Agnes, Cleary, Alan, Close, Timothy J., Cook, Douglas R., Cooksey, Amanda M., Coyne, Clarice, Dash, Sudhansu, Dickstein, Rebecca, Farmer, Andrew D., Fernández-Baca, David, Hokin, Samuel, Jones, Elizabeth S., Kang, Yun, Monteros, Maria J., Muñoz-Amatriaín, María, Mysore, Kirankumar S., Pislariu, Catalina I., Richards, Chris, Shi, Ainong, Town, Christopher D., Udvardi, Michael, von Wettberg, Eric Bishop ... Zhao, Patrick X. (2019). The future of legume genetic data resources: challenges, opportunities, and priorities. Legume Science, 1 (1) e16, 1-15. doi: 10.1002/leg3.16 |
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2019 Journal Article Celebrating 20 years of genetic discoveries in legume nodulation and symbiotic nitrogen fixationRoy, Sonali, Liu, Wei, Nandety, Raja Sekhar, Crook, Ashley, Mysore, Kirankumar S., Pislariu, Catalina I., Frugoli, Julia, Dickstein, Rebecca and Udvardi, Michael K. (2019). Celebrating 20 years of genetic discoveries in legume nodulation and symbiotic nitrogen fixation. The Plant Cell, 32 (1), 15-41. doi: 10.1105/tpc.19.00279 |
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2019 Journal Article GWASpro: A high-performance genome-wide association analysis serverKim, Bongsong, Dai, Xinbin, Zhang, Wenchao, Zhuang, Zhaohong, Sanchez, Darlene L, Lübberstedt, Thomas, Kang, Yun, Udvardi, Michael K., Beavis, William D., Xu, Shizhong and Zhao, Patrick X. (2019). GWASpro: A high-performance genome-wide association analysis server. Bioinformatics, 35 (14) bty989, 2512-2514. doi: 10.1093/bioinformatics/bty989 |
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2019 Journal Article A protein complex required for polar growth of rhizobial infection threadsLiu, Cheng-Wu, Breakspear, Andrew, Stacey, Nicola, Findlay, Kim, Nakashima, Jin, Ramakrishnan, Karunakaran, Liu, Miaoxia, Xie, Fang, Endre, Gabriella, de Carvalho-Niebel, Fernanda, Oldroyd, Giles E. D., Udvardi, Michael K., Fournier, Joëlle and Murray, Jeremy D. (2019). A protein complex required for polar growth of rhizobial infection threads. Nature Communications, 10 (1) 2848. doi: 10.1038/s41467-019-10029-y |
