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2022 Journal Article Dissecting Tissue Compartment-Specific Protein Signatures in Primary and Metastatic Oropharyngeal Squamous Cell CarcinomasSadeghirad, Habib, Monkman, James, Mehdi, Ahmed M., Ladwa, Rahul, O’Byrne, Ken, Hughes, Brett G. M. and Kulasinghe, Arutha (2022). Dissecting Tissue Compartment-Specific Protein Signatures in Primary and Metastatic Oropharyngeal Squamous Cell Carcinomas. Frontiers in Immunology, 13 895513, 1-11. doi: 10.3389/fimmu.2022.895513 |
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2022 Other Outputs GSAO - Gene Set Annotation Overlap (Version 0.1.0)Mehdi, Ahmed (2022). GSAO - Gene Set Annotation Overlap (Version 0.1.0). The University of Queensland. (Dataset) doi: 10.48610/2c1d352 |
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2022 Other Outputs Environmental Pathways DatabaseMehdi, Ahmed (2022). Environmental Pathways Database. The University of Queensland. (Dataset) doi: 10.48610/ee3f1f2 |
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2022 Other Outputs E.PAGE: A curated database and enrichment tool to predict gene modules associated with gene-environment interactionsMuralidharan, Sachin, Ali, Sarah, Yang, Lilin, Badshah, Joshua, Zahir, Farah, Ali, Rubbiya, Chandra, Janin, Thomas, Ranjeny and Mehdi, Ahmed M. (2022). E.PAGE: A curated database and enrichment tool to predict gene modules associated with gene-environment interactions. doi: 10.1101/2022.01.03.474848 |
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2022 Other Outputs PredictPAM. Mehdi, Ahmed (2022). PredictPA. The University of Queensland. (Dataset) doi: 10.48610/a53d449 |
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2022 Other Outputs NucImportMehdi, Ahmed M. (2022). NucImport. The University of Queensland. (Dataset) doi: 10.48610/7bfd689 |
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2022 Other Outputs dLOCALMotifAhmed M. Mehdi (2022). dLOCALMotif. The University of Queensland. (Dataset) doi: 10.48610/79aeb64 |
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2021 Journal Article Acquisition of murine splenic myeloid cells for protein and gene expression profiling by advanced flow cytometry and CITE-seqRødahl, Inga, Gotley, James, Andersen, Stacey B., Yu, Meihua, Mehdi, Ahmed M., Christ, Angelika N., Hamilton-Williams, Emma E., Frazer, Ian H., Lukowski, Samuel W. and Chandra, Janin (2021). Acquisition of murine splenic myeloid cells for protein and gene expression profiling by advanced flow cytometry and CITE-seq. STAR Protocols, 2 (4) 100842, 1-27. doi: 10.1016/j.xpro.2021.100842 |
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2021 Journal Article Key signaling networks are dysregulated in patients with the adipose tissue disorder, lipedemaIshaq, Musarat, Bandara, Nadeeka, Morgan, Steven, Nowell, Cameron, Mehdi, Ahmad M., Lyu, Ruqian, McCarthy, Davis, Anderson, Dovile, Creek, Darren J., Achen, Marc G., Shayan, Ramin and Karnezis, Tara (2021). Key signaling networks are dysregulated in patients with the adipose tissue disorder, lipedema. International Journal of Obesity, 46 (3), 502-514. doi: 10.1038/s41366-021-01002-1 |
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2021 Other Outputs Identification of microRNAs in the West Nile virus vector Culex tarsalisAsad, Sultan, Mehdi, Ahmed M., Pujari, Sujit, Rüeckert, Claudia, Ebel, Gregory D. and Rasgon, Jason L. (2021). Identification of microRNAs in the West Nile virus vector Culex tarsalis. |
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2021 Other Outputs IL-2 stromal signatures dissect immunotherapy response groups in nonsmall cell lung cancer (NSCLC)Monkman, James, Kim, Honesty, Mayer, Aaron, Mehdi, Ahmed, Matigian, Nicholas, Cumberbatch, Marie, Bhagat, Milan, Ladwa, Rahul, Mueller, Scott N., Adams, Mark N., O’Byrne, Ken and Kulasinghe, Arutha (2021). IL-2 stromal signatures dissect immunotherapy response groups in nonsmall cell lung cancer (NSCLC). |
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2021 Conference Publication Antigen-expanded t cells infiltrating new-onset rheumatoid arthritis synovial tissue are IL-6-reponsive, T-helper 2 and pro-inflammatory viral-specific clonesWehr, Pascale, Nel, Hendrik J., Zhou, Chenhao, Mehdi, Ahmed M., McGuire, Helen, Weedon, Helen, Small, Annabelle, Steptoe, Raymond, Gras, Stephanie, Wechalekar, Mihir D. and Thomas, Ranjeny (2021). Antigen-expanded t cells infiltrating new-onset rheumatoid arthritis synovial tissue are IL-6-reponsive, T-helper 2 and pro-inflammatory viral-specific clones. Australian Rheumatology Association 61st Annual Scientific Meeting, Hybrid Meeting, 21–23 May 2021. Richmond, VIC, Australia: Wiley-Blackwell. |
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2021 Journal Article Immune-inhibitory gene expression is positively correlated with overall immune activity and predicts increased survival probability of cervical and head and neck cancer patientsBudhwani, Megha, Turrell, Gavin, Yu, Meihua, Frazer, Ian H., Mehdi, Ahmed M. and Chandra, Janin (2021). Immune-inhibitory gene expression is positively correlated with overall immune activity and predicts increased survival probability of cervical and head and neck cancer patients. Frontiers in Molecular Biosciences, 8 622643, 622643. doi: 10.3389/fmolb.2021.622643 |
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2021 Other Outputs E.PAGEMehdi, Ahmed (2021). E.PAGE. The University of Queensland. (Dataset) doi: 10.14264/e63e27d |
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2021 Journal Article A patient-centered knowledge translation tool for treat-to-target strategy in rheumatoid arthritis: patient and rheumatologist perspectivesBenham, Helen, Chiu, Hedva, Tesiram, Joanne, Mehdi, Ahmed, Landsberg, Peter, Grosman, Sergei, Harrison, Andrew, Nash, Peter, Thomas, Ranjeny, Langbecker, Danette and Van Driel, Mieke (2021). A patient-centered knowledge translation tool for treat-to-target strategy in rheumatoid arthritis: patient and rheumatologist perspectives. International Journal of Rheumatic Diseases, 24 (3), 355-363. doi: 10.1111/1756-185x.14051 |
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2021 Journal Article Proinsulin‐specific T‐cell responses correlate with estimated c‐peptide and predict partial remission duration in type 1 diabetesMusthaffa, Yassmin, Hamilton‐Williams, Emma E, Nel, Hendrik J., Bergot, Anne‐Sophie, Mehdi, Ahmed M., Harris, Mark and Thomas, Ranjeny (2021). Proinsulin‐specific T‐cell responses correlate with estimated c‐peptide and predict partial remission duration in type 1 diabetes. Clinical & Translational Immunology, 10 (7) e1315, e1315. doi: 10.1002/cti2.1315 |
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2021 Journal Article High levels of soluble CD25 in COVID‐19 severity suggest a divergence between anti‐viral and pro‐inflammatory T‐cell responsesXie, Min, Yunis, Joseph, Yao, Yin, Shi, Jing, Yang, Yang, Zhou, Pengcheng, Liang, Kaili, Wan, Yanmin, Mehdi, Ahmed, Chen, Zhian, Wang, Naiqi, Xu, Shuyun, Zhou, Min, Yu, Muqing, Wang, Ke, Tao, Yu, Zhou, Ying, Li, Xiaochen, Liu, Xiansheng, Yu, Xiao, Wei, Yunbo, Liu, Zheng, Sprent, Jonathan and Yu, Di (2021). High levels of soluble CD25 in COVID‐19 severity suggest a divergence between anti‐viral and pro‐inflammatory T‐cell responses. Clinical & Translational Immunology, 10 (2) e1251, e1251. doi: 10.1002/cti2.1251 |
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2021 Journal Article Rheumatoid arthritis is a preventable disease: 11 ways to reduce your patients’ riskKoller‐Smith, Louise, Mehdi, Ahmed M., March, Lyn, Tooth, Leigh, Mishra, Gita and Thomas, Ranjeny (2021). Rheumatoid arthritis is a preventable disease: 11 ways to reduce your patients’ risk. Internal Medicine Journal, 52 (5), 711-716. doi: 10.1111/imj.15537 |
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2020 Conference Publication Mapping Oligoclonally Expanded T Cells Within the Peripheral and Synovial Immune Landscape of Untreated ACPA plus Rheumatoid Arthritis Patients at the Single Cell LevelWehr, Pascale, Nel, Hendrik, Zhou, Chenhao, Mehdi, Ahmed, Christ, Angelika, Weedon, Helen, Wechalekar, Mihir and Thomas, Ranjeny (2020). Mapping Oligoclonally Expanded T Cells Within the Peripheral and Synovial Immune Landscape of Untreated ACPA plus Rheumatoid Arthritis Patients at the Single Cell Level. ACR Convergence 2020, Virtual, 5-9 November 2020. Hoboken, NJ, United States: John Wiley & Sons. doi: 10.1002/art.41538 |
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2019 Journal Article Regulation of tolerogenic features on dexamethasone-modulated MPLA-activated dendritic cells by MYCGarcia-Gonzalez, Paulina A., Maggi, Jaxaira, Schinnerling, Katina, Sepulveda-Gutierrez, Alejandro, Soto, Lilian, Neire, Oscar, Mehdi, Ahmed M., Nel, Hendrik J., Pesce, Barbara, Aravena, Octavio, Carmen Molina, Maria, Catalan, Diego, Thomas, Ranjeny, Verdugo, Ricardo A. and Carlos Aguillon, Juan (2019). Regulation of tolerogenic features on dexamethasone-modulated MPLA-activated dendritic cells by MYC. Frontiers in Immunology, 10 (MAY) 1171, 1171. doi: 10.3389/fimmu.2019.01171 |
