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2024 Conference Publication Epithelial cancers demonstrate IL34-associated dysfunction of Langerhans cellsDang, Thi Viet Trinh, Gillinder, Kevin R., Nguyen, Quan, Mulay, Onkar, Vo, Tuan, Mehdi, Ahmed M., Zhou, Chenhao, Brooks, Andrew J., Asplett, Kiran, Leggatt, Graham R., Hume, David A., Frazer, Ian H. and Chandra, Janin (2024). Epithelial cancers demonstrate IL34-associated dysfunction of Langerhans cells. AACR Special Conference in Cancer Research: Tumor Immunology and Immunotherapy, Boston, MA, United States, 18-21 October 2024. Philadelphia, PA, United States: American Association for Cancer Research. doi: 10.1158/2326-6074.tumimm24-a001 |
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2024 Journal Article A pilot study: Examining cytoskeleton gene expression profiles in Pakistani children with autism spectrum disorderMalik, Sana, Ali, Syed Aoun, Mehdi, Ahmed Murtaza, Raza, Amir, Bashir, Shahid and Baig, Deeba Noreen (2024). A pilot study: Examining cytoskeleton gene expression profiles in Pakistani children with autism spectrum disorder. International Journal of Developmental Neuroscience, 84 (7), 769-778. doi: 10.1002/jdn.10372 |
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2024 Journal Article Home nursing and self-administered outpatient parenteral antimicrobial treatment: a comparison of demographics and outcomes from a large regional hospital in Queensland, AustraliaBrand, Holly, Fryer, Michael, Mehdi, Ahmed M., Melon, Alex, Morcombe, Bridie, Choong, Keat and Subedi, Shradha (2024). Home nursing and self-administered outpatient parenteral antimicrobial treatment: a comparison of demographics and outcomes from a large regional hospital in Queensland, Australia. Internal Medicine Journal, 54 (8), 1351-1359. doi: 10.1111/imj.16394 |
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2024 Journal Article Spatial proteomic profiling of tumor and stromal compartments in non‐small‐cell lung cancer identifies signatures associated with overall survivalYaghoubi Naei, Vahid, Monkman, James, Sadeghirad, Habib, Mehdi, Ahmed, Blick, Tony, Mullally, William, O'Byrne, Ken, Warkiani, Majid Ebrahimi and Kulasinghe, Arutha (2024). Spatial proteomic profiling of tumor and stromal compartments in non‐small‐cell lung cancer identifies signatures associated with overall survival. Clinical & Translational Immunology, 13 (7) e1522, 1-11. doi: 10.1002/cti2.1522 |
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2024 Journal Article A novel method to monitor rheumatoid arthritis prevalence using hospital and medication databasesKoller-Smith, Louise, Mehdi, Ahmed, March, Lyn, Tooth, Leigh, Mishra, Gita D. and Thomas, Ranjeny (2024). A novel method to monitor rheumatoid arthritis prevalence using hospital and medication databases. Arthritis Research and Therapy, 26 (1) 133, 133. doi: 10.1186/s13075-024-03366-x |
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2024 Journal Article TGF-β signalling limits effector function capacity of NK cell anti-tumour immunity in human bladder cancerWong, Joshua K. M., McCulloch, Timothy R., Alim, Louisa, Omer, Natacha, Mehdi, Ahmed M., Tuong, Zewen Kelvin, Bonfim-Melo, Alexis, Chung, Eric, Nicol, Alice, Simpson, Fiona, Rhee, Handoo, Rossi, Gustavo Rodrigues and Souza-Fonseca-Guimaraes, Fernando (2024). TGF-β signalling limits effector function capacity of NK cell anti-tumour immunity in human bladder cancer. EBioMedicine, 104 105176, 1-15. doi: 10.1016/j.ebiom.2024.105176 |
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2024 Journal Article The in situ transcriptomic landscape of breast tumour-associated and normal adjacent endothelial cellsRavichandran, Akhilandeshwari, Monkman, James, Mehdi, Ahmed M., Blick, Tony, Snell, Cameron, Kulasinghe, Arutha and Bray, Laura J. (2024). The in situ transcriptomic landscape of breast tumour-associated and normal adjacent endothelial cells. Biochimica et Biophysica Acta (BBA) - Molecular Basis of Disease, 1870 (2) 166985, 166985. doi: 10.1016/j.bbadis.2023.166985 |
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2024 Journal Article An investigation into optimizing the friction stir welding factors (FSWF) for yellow brassRaza, Syed Farhan, Ishfaq, Kashif, Zahoor, Sadaf, Khan, Sarmad Ali, Raza, Muhammad Taskeen and Mehdi, Ahmed Murtaza (2024). An investigation into optimizing the friction stir welding factors (FSWF) for yellow brass. International Journal of Advanced Manufacturing Technology, 132 (7-8), 3903-3925. doi: 10.1007/s00170-024-13582-z |
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2023 Journal Article Exploring the relationship between novel MSN exon mutations and altered expression of other cytoskeleton genes in archival FFPE meningioma tissuesAyoub, Aqsa, Gul, Samar Ijaz, Mehdi, Ahmed Murtaza, Ali, Syed Aoun, Majeed, Fazeel, Ayoub, Ali Nisar, Tariq, Ghufran, Razia, Rabat, Hanook, Sharoon and Baig, Deeba Noreen (2023). Exploring the relationship between novel MSN exon mutations and altered expression of other cytoskeleton genes in archival FFPE meningioma tissues. Human Gene, 38 201235, 1-10. doi: 10.1016/j.humgen.2023.201235 |
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2023 Journal Article Barriers and facilitators to COVID-19 vaccine uptake among Australian health professional students during the pandemic: a nationwide studyChen, Yingyan, Prichard, Roslyn, Mason, Matt, Tower, Marion, Zimmerman, Peta-Anne, Sparke, Vanessa, Layh, Janice, Mehdi, Ahmed M. and Lin, Frances Fengzhi (2023). Barriers and facilitators to COVID-19 vaccine uptake among Australian health professional students during the pandemic: a nationwide study. Journal of Public Health Policy, 44 (3), 400-414. doi: 10.1057/s41271-023-00422-9 |
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2023 Journal Article Multi‐omic and spatial dissection of immunotherapy response groups in non‐small cell lung cancerMonkman, James, Kim, Honesty, Mayer, Aaron, Mehdi, Ahmed, Matigian, Nicholas, Cumberbatch, Marie, Bhagat, Milan, Ladwa, Rahul, Mueller, Scott N., Adams, Mark N., O'Byrne, Ken and Kulasinghe, Arutha (2023). Multi‐omic and spatial dissection of immunotherapy response groups in non‐small cell lung cancer. Immunology, 169 (4), 487-502. doi: 10.1111/imm.13646 |
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2023 Journal Article Identification of MicroRNAs in the West Nile Virus Vector Culex tarsalis (Diptera: Culicidae)Asad, Sultan, Mehdi, Ahmed M., Pujhari, Sujit, Rückert, Claudia, Ebel, Gregory D. and Rasgon, Jason L. (2023). Identification of MicroRNAs in the West Nile Virus Vector Culex tarsalis (Diptera: Culicidae). Journal of Medical Entomology, 60 (2), 282-293. doi: 10.1093/jme/tjac182 |
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2023 Journal Article Genetically encoded Runx3 and CD4+ intestinal epithelial lymphocyte deficiencies link SKG mouse and human predisposition to spondyloarthropathyBhuyan, Zaied Ahmed, Rahman, M. Arifur, Maradana, Muralidhara Rao, Mehdi, Ahmed M., Bergot, Anne-Sophie, Simone, Davide, El-Kurdi, Marya, Garrido-Mesa, Jose, Cai, Cheng Bang Benjamin, Cameron, Amy J., Hanson, Aimee L., Nel, Hendrik J., Kenna, Tony, Leo, Paul, Rehaume, Linda, Brown, Matthew A., Ciccia, Francesco and Thomas, Ranjeny (2023). Genetically encoded Runx3 and CD4+ intestinal epithelial lymphocyte deficiencies link SKG mouse and human predisposition to spondyloarthropathy. Clinical Immunology, 247 109220, 1-14. doi: 10.1016/j.clim.2022.109220 |
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2022 Journal Article HPV status represents dominant trait driving delineation of survival-associated gene co-expression networks in head and neck cancerMehdi, Ahmed M., Zhou, Chenhao, Turrell, Gavin, Walpole, Euan, Porceddu, Sandro, Frazer, Ian H. and Chandra, Janin (2022). HPV status represents dominant trait driving delineation of survival-associated gene co-expression networks in head and neck cancer. Cancer Gene Therapy, 30 (4), 1-12. doi: 10.1038/s41417-022-00577-9 |
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2022 Journal Article Environmental pathways affecting gene expression (E.PAGE) as an R package to predict gene–environment associationsMuralidharan, Sachin, Ali, Sarah, Yang, Lilin, Badshah, Joshua, Zahir, Syeda Farah, Ali, Rubbiya A., Chandra, Janin, Frazer, Ian H., Thomas, Ranjeny and Mehdi, Ahmed M. (2022). Environmental pathways affecting gene expression (E.PAGE) as an R package to predict gene–environment associations. Scientific Reports, 12 (1) 18710, 1-19. doi: 10.1038/s41598-022-21988-6 |
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2022 Conference Publication Delineation of spatial tissue signatures of immunotherapy response groups in non-small cell lung cancer (NSCLC)Kulasinghe, Arutha, Monkman, James, Kim, Honesty, Mayer, Aaron, Mehdi, Ahmed, Cumberbatch, Marie, Bhagat, Milan, Schneider, Fabian, Thaagard, Jeppe, Mansfield, James, Ladwa, Rahul, Mueller, Scott, Adams, Mark and O’byrne, Kenneth (2022). Delineation of spatial tissue signatures of immunotherapy response groups in non-small cell lung cancer (NSCLC). SITC 37th Annual Meeting (SITC 2022), Boston, MA USA, 8-12 November 2022. London, United Kingdom: BMJ Publishing Group. doi: 10.1136/jitc-2022-sitc2022.0118 |
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2022 Journal Article Randomized phase I trial of antigen-specific tolerizing immunotherapy with peptide/calcitriol liposomes in ACPA+ rheumatoid arthritisSonigra, Amee, Nel, Hendrik J., Wehr, Pascale, Ramnoruth, Nishta, Patel, Swati, van Schie, Karin A., Bladen, Maxwell W., Mehdi, Ahmed M., Tesiram, Joanne, Talekar, Meghna, Rossjohn, Jamie, Reid, Hugh H., Stuurman, Frederik E., Roberts, Helen, Vecchio, Phillip, Gourley, Ian, Rigby, Mark, Becart, Stephane, Toes, Rene E.M., Scherer, Hans Ulrich, Lê Cao, Kim-Anh, Campbell, Kim and Thomas, Ranjeny (2022). Randomized phase I trial of antigen-specific tolerizing immunotherapy with peptide/calcitriol liposomes in ACPA+ rheumatoid arthritis. JCI Insight, 7 (20) e160964, 1-18. doi: 10.1172/jci.insight.160964 |
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2022 Conference Publication Multi-omic dissection of immunotherapy response groups in non-small cell lung cancer (NSCLC)Kulasinghe, Arutha, Monkman, James, Kim, Honesty, Mayer, Aaron, Mehdi, Ahmed, Matigian, Nicholas, Cumberbatch, Marie, Bhagat, Milan, Ladwa, Rahul, Mueller, Scott, Adams, Mark and O'Byrne, Ken (2022). Multi-omic dissection of immunotherapy response groups in non-small cell lung cancer (NSCLC). AACR Annual Meeting 2022, New Orleans, LA United States, 8-13 April 2022. Philadelphia, PA United States: American Association for Cancer Research. doi: 10.1158/1538-7445.am2022-2036 |
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2022 Journal Article Dissecting Tissue Compartment-Specific Protein Signatures in Primary and Metastatic Oropharyngeal Squamous Cell CarcinomasSadeghirad, Habib, Monkman, James, Mehdi, Ahmed M., Ladwa, Rahul, O’Byrne, Ken, Hughes, Brett G. M. and Kulasinghe, Arutha (2022). Dissecting Tissue Compartment-Specific Protein Signatures in Primary and Metastatic Oropharyngeal Squamous Cell Carcinomas. Frontiers in Immunology, 13 895513, 1-11. doi: 10.3389/fimmu.2022.895513 |
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2022 Other Outputs GSAO - Gene Set Annotation Overlap (Version 0.1.0)Mehdi, Ahmed (2022). GSAO - Gene Set Annotation Overlap (Version 0.1.0). The University of Queensland. (Dataset) doi: 10.48610/2c1d352 |
