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2026

Journal Article

TREAT-TO-TARGET IN INFLAMMATORY BOWEL DISEASE: PROMISE, PERILS, AND THE PATH FORWARD

Singh, Siddharth, Nardone, Olga Maria, Allocca, Mariangela, Yuan, Yuhong, Begun, Jakob, Hou, Jason K., Shehab, Mohammad, Kobayashi, Taku, Ahuja, Vineet, Dignass, Axel and Jairath, Vipul (2026). TREAT-TO-TARGET IN INFLAMMATORY BOWEL DISEASE: PROMISE, PERILS, AND THE PATH FORWARD. Clinical Gastroenterology and Hepatology. doi: 10.1016/j.cgh.2026.09.033

TREAT-TO-TARGET IN INFLAMMATORY BOWEL DISEASE: PROMISE, PERILS, AND THE PATH FORWARD

2026

Journal Article

Adherens junction dysfunction in intestinal inflammation revisited

Haslam, Fabienne, Begun, Jakob and Yap, Alpha S. (2026). Adherens junction dysfunction in intestinal inflammation revisited. Molecular Biology of the Cell, 37 (10) mbc.E25-09-0426, 1-6. doi: 10.1091/mbc.e25-09-0426

Adherens junction dysfunction in intestinal inflammation revisited

2026

Journal Article

Janus kinase inhibitors for acute severe ulcerative colitis: comparing upadacitinib to tofacitinib and rescue to sequential salvage therapy

Gilmore, R., Fernandes, R., Goetz, N., Chin, S., Con, D., De Cruz, P., Demase, K., Sparrow, M. P., Lucas, S., Garg, M., Tuttle, Z., Clark, N., Tassone, D., Ding, N., Loebenstein, M., Nguyen, A., Moore, G. T., Thin, L., MacFarlane, K., Lynch, K. D., Subhaharan, D., Mohsen, W., Haig, A., Day, M., White, L., Baker, J., Venugopal, K., Tandon, B., Bryant, R. V. ... An, Y. K. (2026). Janus kinase inhibitors for acute severe ulcerative colitis: comparing upadacitinib to tofacitinib and rescue to sequential salvage therapy. Clinical Gastroenterology and Hepatology. doi: 10.1016/j.cgh.2026.09.017

Janus kinase inhibitors for acute severe ulcerative colitis: comparing upadacitinib to tofacitinib and rescue to sequential salvage therapy

2026

Journal Article

The Burden of Viral Respiratory Infections in Immunosuppressed Inflammatory Bowel Disease Patients

Huynh, D., Khoo, E., Shanmuga Anandan, A. and Begun, J. (2026). The Burden of Viral Respiratory Infections in Immunosuppressed Inflammatory Bowel Disease Patients. JGH Open, 10 (8) e70456, e70456-e70456. doi: 10.1002/jgh3.70456

The Burden of Viral Respiratory Infections in Immunosuppressed Inflammatory Bowel Disease Patients

2026

Journal Article

Study of TOfacitinib for the treatment of chronic PouchITis (STOPit): a multi-centre open label induction with randomised, double blind, placebo-controlled maintenance trial

Khoo, Emi, Holtmann, Gerald and Begun, Jakob (2026). Study of TOfacitinib for the treatment of chronic PouchITis (STOPit): a multi-centre open label induction with randomised, double blind, placebo-controlled maintenance trial. BMJ Open, 16 (7) e118940, e118940-7. doi: 10.1136/bmjopen-2026-118940

Study of TOfacitinib for the treatment of chronic PouchITis (STOPit): a multi-centre open label induction with randomised, double blind, placebo-controlled maintenance trial

2026

Journal Article

Acute severe ulcerative colitis patients from Asia have lower colectomy risk than patients from Australasia

Fernandes, Richard Gareth, Kim, Dong Hyun, Ruddick-Collins, Leonie, Vasudevan, Abhinav, Brownson, Anthony Robert, Ngoi, Benjamin, Lin, Chun-Chi, Haifer, Craig, Kim, Dae Sung, Swe, Ei, Wright, Emily Kate, Song, Eun Mi, Mahy, Gillian, Moore, Gregory Thomas, Lee, Hyun Seok, Kim, Hyun Soo, Zhang, Jennifer, Yan Mak, Joyce Wing, Lee, Jun, Lynch, Kate, Gazelakis, Kathryn, Rice, Katie, Kim, Kyeong Ok, Liu, Jing, Lilian Bracken, Lucy Mary, Garg, Mayur, Schultz, Michael, Clark, Nicholas, Cao, Qian ... An, Yoon-Kyo (2026). Acute severe ulcerative colitis patients from Asia have lower colectomy risk than patients from Australasia. Clinical Gastroenterology and Hepatology, 24 (7), 1916-1927. doi: 10.1016/j.cgh.2025.10.019

Acute severe ulcerative colitis patients from Asia have lower colectomy risk than patients from Australasia

2026

Journal Article

Never‐smoking is associated with histologic remission in ulcerative colitis: a post‐hoc analysis of the VIEWS randomised controlled trial

Pudipeddi, Aviv, Pajes, Nico, Paramsothy, Sudarshan, Kariyawasam, Viraj, Paramsothy, Ramesh, Ghaly, Simon, Haifer, Craig, An, Yoon‐Kyo, Begun, Jakob, Connor, Susan J., Corte, Crispin, Ward, Mark G., De Cruz, Peter, Fung, Caroline Lan‐San, Redmond, Diane, Chan, Webber, Mourad, Fadi H., Kermeen, Melissa and Leong, Rupert W. (2026). Never‐Smoking Is Associated With Histologic Remission in Ulcerative Colitis: A Post‐Hoc Analysis of the VIEWS Randomised Controlled Trial. JCC Plus, 1 (4) e70051. doi: 10.1002/jcc5.70051

Never‐smoking is associated with histologic remission in ulcerative colitis: a post‐hoc analysis of the VIEWS randomised controlled trial

2026

Journal Article

New Diagnostic Criteria for Acute Severe Ulcerative Colitis in the Modern Treatment Era: A Modified Delphi Consensus by REFINED-ASUC

Raine, Tim, Peyrin-Biroulet, Laurent, Begun, Jakob, Biedermann, Luc, Blumenstein, Irina, Cheifetz, Adam S., Colombel, Jean-Frederic, Dulai, Parambir S., Gecse, Krisztina B., Jairath, Vipul, Nakase, Hiroshi, Panaccione, Remo, Reinisch, Walter, Verstockt, Bram and Higgins, Peter D.R. (2026). New Diagnostic Criteria for Acute Severe Ulcerative Colitis in the Modern Treatment Era: A Modified Delphi Consensus by REFINED-ASUC. Clinical Gastroenterology and Hepatology. doi: 10.1016/j.cgh.2026.07.011

New Diagnostic Criteria for Acute Severe Ulcerative Colitis in the Modern Treatment Era: A Modified Delphi Consensus by REFINED-ASUC

2026

Journal Article

Distinct predictive factors for acute severe ulcerative colitis in East Asian and Western populations

Kim, Eun Soo, Kim, Dong Hyun, Kim, Seong-Jung, Park, Sang Hyoung, Lee, Hyun Seok, Kim, Sung Kook, Kim, Hyun Soo, Lee, Jun, Kim, Kyeong Ok, Jang, Byung Ik, Lee, Yoo Jin, Song, Eun Mi, Kim, Dae Sung, Lin, Chun-Chi, Mak, Joyce Wing Yan, Liu, Jing, Cao, Qian, Wei, Shu-Chen, Lin, Wei-Chen, Hsu, Wen-Hung, Sagami, Shintaro, Kobayashi, Taku, Fernandes, Richard G, Gilmore, Robert, An, Yoon-Kyo, Begun, Jakob, Rice, Katie, Ruddick-Collins, Leonie, Vasudevan, Abhinav ... Australia New Zealand IBD Consortium (ANZIBDC) and the Asian Organization for Crohn’s and Colitis (AOCC) (2026). Distinct predictive factors for acute severe ulcerative colitis in East Asian and Western populations. Inflammatory Bowel Diseases izag098. doi: 10.1093/ibd/izag098

Distinct predictive factors for acute severe ulcerative colitis in East Asian and Western populations

2026

Journal Article

Extended high‐dose tofacitinib induction improves clinical response in ulcerative colitis: a multicenter cohort study

Gilmore, R., Pham, T., Fernandes, R. G., Wright, E. K., Lo, S., Rosella, O., De Cruz, P., Andrew, B., Vasudevan, A., Gazelakis, K., Moore, G. T., Thin, L., Au, K., Ghaly, S., Chen, C., Mohsen, W., Goodwin, T., Sparrow, M. P., Ward, M. G., Chew, M., Garg, M., Shelton, E., Lawrance, I. C., Thorat, A., da Fonseca Pereira, C., Begun, J. and An, Y. K. (2026). Extended high‐dose tofacitinib induction improves clinical response in ulcerative colitis: a multicenter cohort study. JGH Open, 10 (5) e70410, 5. doi: 10.1002/jgh3.70410

Extended high‐dose tofacitinib induction improves clinical response in ulcerative colitis: a multicenter cohort study

2026

Journal Article

Development of a novel polyleucine-based immunopotentiator for subunit vaccines against Group A Streptococcus

Lu, Lantian, Cruz, Jazmina L. Gonzalez, Giri, Rabina, Zhang, Yuexiao, Bashiri, Sahra, Cadena, Leslie C. Domínguez, Li, Shuhang, Khalil, Zeinab G., Hussein, Waleed M., Wang, Jingwen, Kiong, Jolynn, Lu, Xuehan, Zhang, Jiahui, Lu, Miao, Huang, Wenbin, Kong, Wei Yang, Nahar, Ummey Jannatun, Koirala, Prashamsa, Guo, Zhong, Walden, Patricia, Blumenthal, Antje, Begun, Jakob, Alexandrov, Kirill, Toth, Istvan, Stephenson, Rachel J. and Skwarczynski, Mariusz (2026). Development of a novel polyleucine-based immunopotentiator for subunit vaccines against Group A Streptococcus. Small, 22 (22) e11459, 1-20. doi: 10.1002/smll.202511459

Development of a novel polyleucine-based immunopotentiator for subunit vaccines against Group A Streptococcus

2026

Journal Article

Advances in Crohn's disease: A comprehensive review of pathophysiology, diagnosis, and emerging therapeutics

An, Yoon‐Kyo, Gilmore, Robert, Radford‐Smith, Graham and Begun, Jakob (2026). Advances in Crohn's disease: A comprehensive review of pathophysiology, diagnosis, and emerging therapeutics. JGH Open, 10 (4) e70394, 1-13. doi: 10.1002/jgh3.70394

Advances in Crohn's disease: A comprehensive review of pathophysiology, diagnosis, and emerging therapeutics

2026

Journal Article

Evaluating treatment to a target of transmural healing in patients with moderately to severely active Crohn’s disease: rationale, design and protocol for the randomised controlled VECTORS trial

Jairath, Vipul, Vuyyuru, Sudheer K, Zou, Guangyong, Ma, Christopher, Neustifter, Blue, Agboton, Christian, Romo Bautista, Itzel, Allocca, Mariangela, An, Yoon-Kyo, Begun, Jakob, Bryant, Robert V, Danese, Silvio, Dubinsky, Marla, Feagan, Brian G, Freire, Marcelo, Novak, Kerri L, Panaccione, Remo, Pudipeddi, Aviv, Rubin, David T, Sands, Bruce E, Sparrow, Miles P, Taylor, Stuart A, Gecse, Krisztina B, Wilkens, Rune and Maaser, Christian (2026). Evaluating treatment to a target of transmural healing in patients with moderately to severely active Crohn’s disease: rationale, design and protocol for the randomised controlled VECTORS trial. BMJ Open Gastroenterology, 13 (1) e002088, 1-13. doi: 10.1136/bmjgast-2025-002088

Evaluating treatment to a target of transmural healing in patients with moderately to severely active Crohn’s disease: rationale, design and protocol for the randomised controlled VECTORS trial

2026

Journal Article

Early infliximab levels and clearance predict outcomes after infliximab rescue in acute severe ulcerative colitis: Results from PREDICT-UC

Li Wai Suen, Christopher F.D., Choy, Matthew C., Con, Danny, Cheng, Kaylene, Nigro, Julie, Breheney, Kerry, Boyd, Kristy, Pena, Raquel, Burrell, Kathryn, Rosella, Ourania, Proud, David, Brouwer, Richard, Gorelik, Alexandra, Liew, Danny, Connell, William, Wright, Emily K., Taylor, Kirstin, Pudipeddi, Aviv, Sawers, Michelle, Christensen, Britt, Ng, Watson., Begun, Jakob, Radford-Smith, Graham L., Garg, Mayur, Martin, Neal, van Langenberg, Daniel R., Ding, Nik S., Beswick, Lauren, Leong, Rupert W. ... De Cruz, Peter (2026). Early infliximab levels and clearance predict outcomes after infliximab rescue in acute severe ulcerative colitis: Results from PREDICT-UC. Gastroenterology, 170 (1), 118-131. doi: 10.1053/j.gastro.2025.07.020

Early infliximab levels and clearance predict outcomes after infliximab rescue in acute severe ulcerative colitis: Results from PREDICT-UC

2026

Journal Article

Pathogenic OTUD3 mutations predispose to ulcerative colitis due to barrier dysfunction

Giri, Rabina, Lee, Minyi, Magor, Graham, Bergot, Anne-Sophie, He, Yaowu, Kryza, Thomas, Khan, Tashbib, Schreiber, Veronika, Gordon, Robert J., Zagani, Rachid, Hasnain, Sumaira Z., Lourie, Rohan, Ewing, Adam, Hooper, John D., Thomas, Ranjeny, Florin, Timothy H., Perkins, Andrew, Gala, Manish and Begun, Jakob (2026). Pathogenic OTUD3 mutations predispose to ulcerative colitis due to barrier dysfunction. Cellular and Molecular Gastroenterology and Hepatology, 20 (2) 101659, 1-20. doi: 10.1016/j.jcmgh.2025.101659

Pathogenic OTUD3 mutations predispose to ulcerative colitis due to barrier dysfunction

2026

Journal Article

Examining attitudes to intestinal ultrasound in inflammatory bowel disease: a national survey of Australian gastroenterologists

Chen, Lynna, Ruddick-Collins, Leonie, An, Yoon-Kyo, Baraty, Brandon, Begun, Jakob, Boyapati, Ray K., Bryant, Robert V., Smith, Rebecca L. and Srinivasan, Ashish R. (2026). Examining attitudes to intestinal ultrasound in inflammatory bowel disease: a national survey of Australian gastroenterologists. Therapeutic Advances in Gastroenterology, 19 17562848261432538, 1-11. doi: 10.1177/17562848261432538

Examining attitudes to intestinal ultrasound in inflammatory bowel disease: a national survey of Australian gastroenterologists

2025

Journal Article

Cost-effective inflammatory bowel disease flare pathway with nurse-led triage and rapid access intestinal ultrasound reduces hospital resource use with high patient satisfaction

Fernandes, Richard Gareth, Khoo, Emi, Jensen Harris, Heidi, Gilmore, Robert, Khaing, Myat Myat, Ennever, Jenny, Mullen, Kaity, Begun, Jakob and An, Yoon-Kyo (2025). Cost-effective inflammatory bowel disease flare pathway with nurse-led triage and rapid access intestinal ultrasound reduces hospital resource use with high patient satisfaction. Journal of Crohn's and Colitis, 19 (12) jjaf221. doi: 10.1093/ecco-jcc/jjaf221

Cost-effective inflammatory bowel disease flare pathway with nurse-led triage and rapid access intestinal ultrasound reduces hospital resource use with high patient satisfaction

2025

Journal Article

Patterns and predictors of steroid use in a real-world inflammatory bowel disease cohort

Wu, Rodger, Rivas, Consuelo, Su, Wai Kin, Deschenes, Renée, Wilson, William, Pipicella, Joseph L., Connor, Susan J., Andrews, Jane M., An, Yoon-Kyo, Begun, Jakob, Boyapati, Ray, Dutt, Shoma, Gearry, Richard B, Ghaly, Simon, Haifer, Craig, Lawrance, Ian C, Lynch, Kate, Moore, Gregory, Radford-Smith, Graham, Shahzad, Asif, Schultz, Michael, Su, Heidi, Ng, Watson, Verdon, Christine, Walker, Gareth and Wark, Gabrielle (2025). Patterns and predictors of steroid use in a real-world inflammatory bowel disease cohort. JGH Open, 9 (12) e70308, 1-14. doi: 10.1002/jgh3.70308

Patterns and predictors of steroid use in a real-world inflammatory bowel disease cohort

2025

Journal Article

Australian real‐world effectiveness and safety of ustekinumab for the treatment of Crohn's Disease: Results of the AURORA Study, including the ANZIBD Consortium

An, Yoon‐Kyo, Lindsay, Niamh, Allan, Natalie, Khoo, Emi, Fernandes, Richard, Gilmore, Robert, Amiss, Anna, Pham, Hai, Ooi, Soong‐Yuan, Thin, Lena, Lightowler, Daniel, Connor, Susan J., Williams, Astrid, De Cruz, Peter, Li Wai Suen, Christopher F. D., Kariyawasam, Viraj, Mitrev, Nikola, Ghaly, Simon, Andrews, Jane M., Christensen, Britt, Sparrow, Miles P., White, Lauren S., Bryant, Robert, Ding, Nik S., Leong, Rupert W., Van Langenberg, Daniel R., Seltenreich, Hansjoerg, Subramaniam, Kavitha, Radford‐Smith, Graham and Begun, Jakob (2025). Australian real‐world effectiveness and safety of ustekinumab for the treatment of Crohn's Disease: Results of the AURORA Study, including the ANZIBD Consortium. JGH Open, 9 (12) e70322, e70322. doi: 10.1002/jgh3.70322

Australian real‐world effectiveness and safety of ustekinumab for the treatment of Crohn's Disease: Results of the AURORA Study, including the ANZIBD Consortium

2025

Journal Article

Point-of-care intestinal ultrasound impacts inflammatory bowel disease care and reduces the need for additional investigations

Tan, Wei-Lian, Khoo, Emi, Khaing, Myat-Myat, Barr, Emily, Fernandes, Richard G., Pham, Hai, An, Yoon-Kyo and Begun, Jakob (2025). Point-of-care intestinal ultrasound impacts inflammatory bowel disease care and reduces the need for additional investigations. Journal of Gastroenterology and Hepatology, 40 (10), 2472-2481. doi: 10.1111/jgh.70019

Point-of-care intestinal ultrasound impacts inflammatory bowel disease care and reduces the need for additional investigations