Overview
Availability
- Dr Shi Wei Chen is:
- Available for supervision
Qualifications
- Doctor of Philosophy, University of Adelaide
Works
Search Professor Shi Wei Chen’s works on UQ eSpace
2025
Journal Article
The biofuel producing legume tree, Pongamia pinnata, offers strong potential for carbon sequestration
Chen, A., Scott, P., Gresshoff, P. M. and Ferguson, B. J. (2025). The biofuel producing legume tree, Pongamia pinnata, offers strong potential for carbon sequestration. doi: 10.1101/2025.06.04.657758
2025
Journal Article
De novo long-read assembly and annotation for genomes of two cotton-associated Fusarium oxysporum isolates
Gardiner, Donald M., Aitken, Elizabeth A. B., van Dam, Peter, Le, Duy P., Smith, Linda J. and Chen, Andrew (2025). De novo long-read assembly and annotation for genomes of two cotton-associated Fusarium oxysporum isolates. Australasian Plant Pathology, 1-10. doi: 10.1007/s13313-025-01057-y
2025
Journal Article
Long-read draft genome sequences of two Fusarium oxysporum f. sp. cubense isolates from banana (Musa spp.)
Sun, Jiaman, Zhang, Jinzhong, Gardiner, Donald M., van Dam, Peter, Fu, Gang, Ferguson, Brett J., Aitken, Elizabeth A. B. and Chen, Andrew (2025). Long-read draft genome sequences of two Fusarium oxysporum f. sp. cubense isolates from banana (Musa spp.). Journal of Fungi, 11 (6) 421, 1-14. doi: 10.3390/jof11060421
2024
Journal Article
Toward marker-assisted selection in breeding for Fusarium wilt tropical race-4 type resistant bananas
Ferreira, Claudia Fortes, Chen, Andrew, Aitken, Elizabeth A. B., Swennen, Rony, Uwimana, Brigitte, Rocha, Anelita de Jesus, Soares, Julianna Matos da Silva, Ramos, Andresa Priscila de Souza and Amorim, Edson Perito (2024). Toward marker-assisted selection in breeding for Fusarium wilt tropical race-4 type resistant bananas. Journal of Fungi, 10 (12) 839, 1-10. doi: 10.3390/jof10120839
2024
Journal Article
Histological dissection of fusarium-banana interaction using GFP-tagged subtropical race 4 strain of Fusarium oxysporum f. sp. cubense on banana cultivars with differing levels of resistance
Chen, Andrew, Chou, Ting-Yan, Chen, Yi, Fallatah, Sumayyah M. A., Anderson, Jay, Sun, Jiaman, Cosgrove, Harry, Gao, Siyuan, Ferguson, Brett J., Soper, Amelie, Gardiner, Donald M. and Aitken, Elizabeth A. B. (2024). Histological dissection of fusarium-banana interaction using GFP-tagged subtropical race 4 strain of Fusarium oxysporum f. sp. cubense on banana cultivars with differing levels of resistance. Microorganisms, 12 (12) 2472, 1-21. doi: 10.3390/microorganisms12122472
2024
Journal Article
Assessing the pathogenicity of Berkeleyomyces rouxiae and Fusarium oxysporum f. sp. vasinfectum on cotton (Gossypium hirsutum) using a rapid and robust seedling screening method
Chen, Andrew, Le, Duy P., Smith, Linda J., Kafle, Dinesh, Aitken, Elizabeth A. B. and Gardiner, Donald M. (2024). Assessing the pathogenicity of Berkeleyomyces rouxiae and Fusarium oxysporum f. sp. vasinfectum on cotton (Gossypium hirsutum) using a rapid and robust seedling screening method. Journal of Fungi, 10 (10) 715, 1-21. doi: 10.3390/jof10100715
2024
Journal Article
Fluorescently tagged Verticillium dahliae to understand the infection process on cotton (Gossypium hirsutum) and weed plant species
Chen, Andrew, Morrison, Sabrina, Gregson, Aphrika, Le, Duy P., Urquhart, Andrew S., Smith, Linda J., Aitken, Elizabeth A. B. and Gardiner, Donald M. (2024). Fluorescently tagged Verticillium dahliae to understand the infection process on cotton (Gossypium hirsutum) and weed plant species. Pathogens, 13 (6) 442, 1-21. doi: 10.3390/pathogens13060442
2023
Journal Article
Impact of inoculum density of Fusarium oxysporum f. sp. zingiberi on symptomatic appearances and yield of ginger (Zingiber officinale Roscoe)
Matthews, Andrea, Muthukumar, Sharan P. T., Hamill, Sharon, Aitken, Elizabeth A. B. and Chen, Andrew (2023). Impact of inoculum density of Fusarium oxysporum f. sp. zingiberi on symptomatic appearances and yield of ginger (Zingiber officinale Roscoe). Access Microbiology, 5 (9) 000605.v3, 1-16. doi: 10.1099/acmi.0.000605.v3
2023
Journal Article
Genetic mapping, candidate gene identification and marker validation for host plant resistance to the race 4 of Fusarium oxysporum f. sp. cubense using Musa acuminata ssp. malaccensis
Chen, Andrew, Sun, Jiaman, Viljoen, Altus, Mostert, Diane, Xie, Yucong, Mangila, Leroy, Bothma, Sheryl, Lyons, Rebecca, Hřibová, Eva, Christelová, Pavla, Uwimana, Brigitte, Amah, Delphine, Pearce, Stephen, Chen, Ning, Batley, Jacqueline, Edwards, David, Doležel, Jaroslav, Crisp, Peter, Brown, Allan F., Martin, Guillaume, Yahiaoui, Nabila, D’Hont, Angelique, Coin, Lachlan, Swennen, Rony and Aitken, Elizabeth A. B. (2023). Genetic mapping, candidate gene identification and marker validation for host plant resistance to the race 4 of Fusarium oxysporum f. sp. cubense using Musa acuminata ssp. malaccensis. Pathogens, 12 (6) 820, 820. doi: 10.3390/pathogens12060820
2023
Journal Article
Identification of a major QTL-controlling resistance to the Subtropical Race 4 of Fusarium oxysporum f. sp. cubense in Musa acuminata ssp. malaccensis
Chen, Andrew, Sun, Jiaman, Martin, Guillaume, Gray, Lesley-Ann, Hřibová, Eva, Christelová, Pavla, Yahiaoui, Nabila, Rounsley, Steve, Lyons, Rebecca, Batley, Jacqueline, Chen, Ning, Hamill, Sharon, Rai, Subash K., Coin, Lachlan, Uwimana, Brigitte, D’Hont, Angelique, Doležel, Jaroslav, Edwards, David, Swennen, Rony and Aitken, Elizabeth A. B. (2023). Identification of a major QTL-controlling resistance to the Subtropical Race 4 of Fusarium oxysporum f. sp. cubense in Musa acuminata ssp. malaccensis. Pathogens, 12 (2) 289, 1-13. doi: 10.3390/pathogens12020289
2023
Journal Article
Fusarium yellows of ginger (Zingiber officinale Roscoe) Caused by Fusarium oxysporum f. sp. zingiberi is associated with cultivar-specific expression of defense-responsive genes
Prasath, Duraisamy, Matthews, Andrea, O’Neill, Wayne T., Aitken, Elizabeth A. B. and Chen, Andrew (2023). Fusarium yellows of ginger (Zingiber officinale Roscoe) Caused by Fusarium oxysporum f. sp. zingiberi is associated with cultivar-specific expression of defense-responsive genes. Pathogens, 12 (1) 141, 141. doi: 10.3390/pathogens12010141
2020
Journal Article
Epistatic interactions between PHOTOPERIOD1, CONSTANS1 and CONSTANS2 modulate the photoperiodic response in wheat
Shaw, Lindsay M., Li, Chengxia, Woods, Daniel P., Alvarez, Maria A., Lin, Huiqiong, Lau, Mei Y., Chen, Andrew and Dubcovsky, Jorge (2020). Epistatic interactions between PHOTOPERIOD1, CONSTANS1 and CONSTANS2 modulate the photoperiodic response in wheat. PLoS Genetics, 16 (7) e1008812, 1-28. doi: 10.1371/journal.pgen.1008812
2019
Journal Article
Wheat VRN1, FUL2 and FUL3 play critical and redundant roles in spikelet development and spike determinacy
Li, Chengxia, Lin, Huiqiong, Chen, Andrew, Lau, Meiyee, Jernstedt, Judy and Dubcovsky, Jorge (2019). Wheat VRN1, FUL2 and FUL3 play critical and redundant roles in spikelet development and spike determinacy. Development, 146 (14) dev175398, dev175398. doi: 10.1242/dev.175398
2019
Journal Article
Assessing variations in host resistance to Fusarium oxysporum f sp. cubense race 4 in Musa species, with a focus on the subtropical race 4
Chen, Andrew, Sun, Jiaman, Matthews, Andrea, Armas-Egas, Liz, Chen, Ning, Hamill, Sharon, Mintoff, Sharl, Tran-Nguyen, Lucy T. T., Batley, Jaqueline and Aitken, Elizabeth A. B. (2019). Assessing variations in host resistance to Fusarium oxysporum f sp. cubense race 4 in Musa species, with a focus on the subtropical race 4. Frontiers in Microbiology, 10 (MAY) 1062, 1062. doi: 10.3389/fmicb.2019.01062
2018
Journal Article
Correction to: Development and characterization of a spring hexaploid wheat line with no functional VRN2 genes (Theoretical and Applied Genetics, (2016), 129, 7, (1417-1428), 10.1007/s00122-016-2713-3)
Kippes, Nestor, Chen, Andrew, Zhang, Xiaoqin, Lukaszewski, Adam J. and Dubcovsky, Jorge (2018). Correction to: Development and characterization of a spring hexaploid wheat line with no functional VRN2 genes (Theoretical and Applied Genetics, (2016), 129, 7, (1417-1428), 10.1007/s00122-016-2713-3). Theoretical and Applied Genetics, 131 (10). doi: 10.1007/s00122-018-3141-3
2016
Journal Article
RNA-seq studies using wheat PHYTOCHROME B and PHYTOCHROME C mutants reveal shared and specific functions in the regulation of flowering and shade-avoidance pathways
Pearce, Stephen, Kippes, Nestor, Chen, Andrew, Debernardi, Juan Manuel and Dubcovsky, Jorge (2016). RNA-seq studies using wheat PHYTOCHROME B and PHYTOCHROME C mutants reveal shared and specific functions in the regulation of flowering and shade-avoidance pathways. BMC Plant Biology, 16 (1) 141, 1-19. doi: 10.1186/s12870-016-0831-3
2016
Journal Article
Development and characterization of a spring hexaploid wheat line with no functional VRN2 genes
Kippes, Nestor, Chen, Andrew, Zhang, Xiaoqin, Lukaszewski, Adam J. and Dubcovsky, Jorge (2016). Development and characterization of a spring hexaploid wheat line with no functional VRN2 genes. Theoretical and Applied Genetics, 129 (7), 1417-1428. doi: 10.1007/s00122-016-2713-3
2014
Journal Article
PHYTOCHROME C plays a major role in the acceleration of wheat flowering under long-day photoperiod
Chen, Andrew, Li, Chengxia, Hu, Wei, Lau, Mei Yee, Lin, Huiqiong, Rockwell, Nathan C., Martin, Shelley S., Jernstedt, Judith A., Lagarias, J. Clark and Dubcovsky, Jorge (2014). PHYTOCHROME C plays a major role in the acceleration of wheat flowering under long-day photoperiod. Proceedings of the National Academy of Sciences of the United States of America, 111 (28), 10037-10044. doi: 10.1073/pnas.1409795111
2014
Journal Article
Fine mapping and epistatic interactions of the vernalization gene VRN-D4 in hexaploid wheat
Kippes, Nestor, Zhu, Jie, Chen, Andrew, Vanzetti, Leonardo, Lukaszewski, Adam, Nishida, Hidetaka, Kato, Kenji, Dvorak, Jan and Dubcovsky, Jorge (2014). Fine mapping and epistatic interactions of the vernalization gene VRN-D4 in hexaploid wheat. Molecular Genetics and Genomics, 289 (1), 47-62. doi: 10.1007/s00438-013-0788-y
2012
Journal Article
Wheat TILLING Mutants Show That the Vernalization Gene VRN1 Down-Regulates the Flowering Repressor VRN2 in Leaves but Is Not Essential for Flowering
Chen, Andrew and Dubcovsky, Jorge (2012). Wheat TILLING Mutants Show That the Vernalization Gene VRN1 Down-Regulates the Flowering Repressor VRN2 in Leaves but Is Not Essential for Flowering. PLoS Genetics, 8 (12) e1003134. doi: 10.1371/journal.pgen.1003134
Supervision
Availability
- Dr Shi Wei Chen is:
- Available for supervision
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Supervision history
Current supervision
-
Doctor Philosophy
Histological analysis of banana-Fusarium interactions
Associate Advisor
Other advisors: Dr Donald Gardiner, Professor Elizabeth Aitken
Media
Enquiries
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