Overview
Background
Research officer, Medical Genomics
QIMR Berghofer Medical Research Institute
Availability
- Dr Venkateswara Addala is:
- Available for supervision
Fields of research
Research impacts
My research addressed the challenges related to key genomic components in tumour-immune editing variation in cancers with poor survival and predicting the responses to cancer immunotherapies. Characterizing genomic determinants in underlying response and resistance to cancer immunotherapy. Through whole genome and RNA sequencing, we identify tumor specific neoantigens that can elicit T-cell responses in cancers. Through established Immunogenomics analysis on different cancer types, we aim to explore the genomics of tumor cells and the properties of immune cells in the tumour microenvironment. Through further research, we uncover how tumours may prevent immune attack and why. We seek to better understand the tumour microenvironment and how it may contribute towards tumour growth. Lastly, we can uncover new techniques in patients screening to see who would benefit most from immunotherapies during the treatment of their disease.
In my PhD I established cancer immunogenomics analysis pipeline, to understand tumour heterogeneity in intrinsic and extrinsic mechanisms across cancer types. This work extends knowledge and lays the foundation that is required in order to successfully establish computational methods that can be used to predict patient immunotherapy responses to immune checkpoint inhibitors.
Works
Search Professor Venkateswara Addala’s works on UQ eSpace
2020
Journal Article
Whole-genome sequencing of acral melanoma reveals genomic complexity and diversity
Newell, Felicity, Wilmott, James S., Johansson, Peter A., Nones, Katia, Addala, Venkateswar, Mukhopadhyay, Pamela, Broit, Natasa, Amato, Carol M., Van Gulick, Robert, Kazakoff, Stephen H., Patch, Ann-Marie, Koufariotis, Lambros T., Lakis, Vanessa, Leonard, Conrad, Wood, Scott, Holmes, Oliver, Xu, Qinying, Lewis, Karl, Medina, Theresa, Gonzalez, Rene, Saw, Robyn P. M., Spillane, Andrew J., Stretch, Jonathan R., Rawson, Robert V., Ferguson, Peter M., Dodds, Tristan J., Thompson, John F., Long, Georgina V., Levesque, Mitchell P. ... Hayward, Nicholas K. (2020). Whole-genome sequencing of acral melanoma reveals genomic complexity and diversity. Nature Communications, 11 (1) 5259, 5259. doi: 10.1038/s41467-020-18988-3
2018
Journal Article
Apert's syndrome: study by whole exome sequencing
Munshi, Anjana, Khetarpal, Preeti, Das, Satrupa, Rao, Venkateshwar, Valecha, Monica, Bansal, Manita and Kumar, Roshan (2018). Apert's syndrome: study by whole exome sequencing. Genes and Diseases, 5 (2), 119-122. doi: 10.1016/j.gendis.2017.07.008
2018
Journal Article
Germline and somatic variant identification using BGISEQ-500 and HiSeq X Ten whole genome sequencing
Patch, Ann-Marie, Nones, Katia, Kazakoff, Stephen H., Newell, Felicity, Wood, Scott, Leonard, Conrad, Holmes, Oliver, Xu, Qinying, Addala, Venkateswar, Creaney, Jenette, Robinson, Bruce W., Fu, Shujin, Geng, Chunyu, Li, Tong, Zhang, Wenwei, Liang, Xinming, Rao, Junhua, Wang, Jiahao, Tian, Mingyu, Zhao, Yonggang, Teng, Fei, Gou, Honglan, Yang, Bicheng, Jiang, Hui, Mu, Feng, Pearson, John V. and Waddell, Nicola (2018). Germline and somatic variant identification using BGISEQ-500 and HiSeq X Ten whole genome sequencing. PloS One, 13 (1) e0190264, e0190264. doi: 10.1371/journal.pone.0190264
2017
Journal Article
Identification of unique neoantigen qualities in long-term survivors of pancreatic cancer
Balachandran, Vinod P., Łuksza, Marta, Zhao, Julia N., Makarov, Vladimir, Moral, John Alec, Remark, Romain, Herbst, Brian, Askan, Gokce, Bhanot, Umesh, Senbabaoglu, Yasin, Wells, Daniel K., Cary, Charles Ian Ormsby, Grbovic-Huezo, Olivera, Attiyeh, Marc, Medina, Benjamin, Zhang, Jennifer, Loo, Jennifer, Saglimbeni, Joseph, Abu-Akeel, Mohsen, Zappasodi, Roberta, Riaz, Nadeem, Smoragiewicz, Martin, Larkin Kelley, Z., Basturk, Olca, Gönen, Mithat, Levine, Arnold J., Allen, Peter J., Fearon, Douglas T., Merad, Miriam ... Bassi, Claudio (2017). Identification of unique neoantigen qualities in long-term survivors of pancreatic cancer. Nature, 551 (7681), 512-516. doi: 10.1038/nature24462
2013
Journal Article
Three most common nonsynonymous UGT1A6*2 polymorphisms (Thr181Ala, Arg184Ser and Ser7Ala) and therapeutic response to deferiprone in β-thalassemia major patients
Dadheech, Sneha, Rao, A. Venkateswara, Shaheen, Uzma, Hussien, Mohammed Dyia, Jain, Suman, Jyothy, A. and Munshi, Anjana (2013). Three most common nonsynonymous UGT1A6*2 polymorphisms (Thr181Ala, Arg184Ser and Ser7Ala) and therapeutic response to deferiprone in β-thalassemia major patients. Gene, 531 (2), 301-5. doi: 10.1016/j.gene.2013.08.078
Supervision
Availability
- Dr Venkateswara Addala is:
- Available for supervision
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Supervision history
Current supervision
-
Doctor Philosophy
Complex neoantigen prediction in cancers
Associate Advisor
Other advisors: Professor Brandon Wainwright
Media
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