Overview
Availability
- Dr Stephanie Portelli is:
- Available for supervision
Qualifications
- Doctor of Philosophy, University of Melbourne
Works
Search Professor Stephanie Portelli’s works on UQ eSpace
2020
Journal Article
Prediction of rifampicin resistance beyond the RRDR using structure-based machine learning approaches
Portelli, Stephanie, Myung, Yoochan, Furnham, Nicholas, Vedithi, Sundeep Chaitanya, Pires, Douglas E. V. and Ascher, David B. (2020). Prediction of rifampicin resistance beyond the RRDR using structure-based machine learning approaches. Scientific Reports, 10 (1) 18120, 1-13. doi: 10.1038/s41598-020-74648-y
2020
Journal Article
Exploring the structural distribution of genetic variation in SARS-CoV-2 with the COVID-3D online resource
Portelli, Stephanie, Olshansky, Moshe, Rodrigues, Carlos H. M., D’Souza, Elston N., Myung, Yoochan, Silk, Michael, Alavi, Azadeh, Pires, Douglas E. V. and Ascher, David B. (2020). Exploring the structural distribution of genetic variation in SARS-CoV-2 with the COVID-3D online resource. Nature Genetics, 52 (10), 999-1001. doi: 10.1038/s41588-020-0693-3
2020
Journal Article
Computational saturation mutagenesis to predict structural consequences of systematic mutations in the beta subunit of RNA polymerase in
Vedithi, Sundeep Chaitanya, Rodrigues, Carlos H. M., Portelli, Stephanie, Skwark, Marcin J., Das, Madhusmita, Ascher, David B., Blundell, Tom L. and Malhotra, Sony (2020). Computational saturation mutagenesis to predict structural consequences of systematic mutations in the beta subunit of RNA polymerase in . Computational and Structural Biotechnology Journal, 18, 271-286. doi: 10.1016/j.csbj.2020.01.002
2020
Journal Article
Combining structure and genomics to understand antimicrobial resistance
Tunstall, Tanushree, Portelli, Stephanie, Phelan, Jody, Clark, Taane G., Ascher, David B. and Furnham, Nicholas (2020). Combining structure and genomics to understand antimicrobial resistance. Computational and Structural Biotechnology Journal, 18, 3377-3394. doi: 10.1016/j.csbj.2020.10.017
2020
Book Chapter
A comprehensive computational platform to guide drug development using graph-based signature methods
Pires, Douglas E. V., Portelli, Stephanie, Rezende, Pâmela M., Veloso, Wandré N. P., Xavier, Joicymara S., Karmakar, Malancha, Myung, Yoochan, Linhares, João P. V., Rodrigues, Carlos H. M., Silk, Michael and Ascher, David B. (2020). A comprehensive computational platform to guide drug development using graph-based signature methods. Structural bioinformatics: methods and protocols. (pp. 91-106) New York, NY, United States: Humana. doi: 10.1007/978-1-0716-0270-6_7
2019
Book Chapter
Exploring protein supersecondary structure through changes in protein folding, stability, and flexibility
Pires, Douglas E. V., Rodrigues, Carlos H. M., Albanaz, Amanda T. S., Karmakar, Malancha, Myung, Yoochan, Xavier, Joicymara, Michanetzi, Eleni-Maria, Portelli, Stephanie and Ascher, David B. (2019). Exploring protein supersecondary structure through changes in protein folding, stability, and flexibility. Protein Supersecondary Structures: Methods and Protocols. (pp. 173-185) edited by Alexander E. Kister. New York, NY, United States: Springer. doi: 10.1007/978-1-4939-9161-7_9
2018
Journal Article
Understanding molecular consequences of putative drug resistant mutations in Mycobacterium tuberculosis
Portelli, Stephanie, Phelan, Jody E., Ascher, David B., Clark, Taane G. and Furnham, Nicholas (2018). Understanding molecular consequences of putative drug resistant mutations in Mycobacterium tuberculosis. Scientific Reports, 8 (1) 15356. doi: 10.1038/s41598-018-33370-6
2018
Journal Article
Genome-wide analysis of multi- and extensively drug-resistant Mycobacterium tuberculosis
Coll, Francesc, Phelan, Jody, Hill-Cawthorne, Grant A., Nair, Mridul B., Mallard, Kim, Ali, Shahjahan, Abdallah, Abdallah M., Alghamdi, Saad, Alsomali, Mona, Ahmed, Abdallah O., Portelli, Stephanie, Oppong, Yaa, Alves, Adriana, Bessa, Theolis Barbosa, Campino, Susana, Caws, Maxine, Chatterjee, Anirvan, Crampin, Amelia C., Dheda, Keertan, Furnham, Nicholas, Glynn, Judith R., Grandjean, Louis, Minh Ha, Dang, Hasan, Rumina, Hasan, Zahra, Hibberd, Martin L., Joloba, Moses, Jones-López, Edward C., Matsumoto, Tomoshige ... Clark, Taane G. (2018). Genome-wide analysis of multi- and extensively drug-resistant Mycobacterium tuberculosis. Nature Genetics, 50 (2), 307-316. doi: 10.1038/s41588-017-0029-0
Supervision
Availability
- Dr Stephanie Portelli is:
- Available for supervision
Before you email them, read our advice on how to contact a supervisor.
Supervision history
Current supervision
-
Doctor Philosophy
Computer-aided drug design: predicting and mitigating drug toxicity
Associate Advisor
Other advisors: Professor David Ascher
-
Doctor Philosophy
Towards the accurate functional characterisation of protein coding mutations
Associate Advisor
Other advisors: Dr Thanh-Binh Nguyen, Professor David Ascher
-
Doctor Philosophy
Personalising treatments for genetic diseases
Associate Advisor
Other advisors: Professor David Ascher
-
Doctor Philosophy
Protein structure guided precision medicine
Associate Advisor
Other advisors: Professor Phil Hugenholtz, Professor David Ascher
-
Doctor Philosophy
Harnessing AlphaFold and explainable AI to better characterise human missense variants and diseases
Associate Advisor
Other advisors: Dr Thanh-Binh Nguyen, Professor David Ascher
-
Doctor Philosophy
Using Deep Learning in Cell & Gene Therapy
Associate Advisor
Other advisors: Professor David Ascher
Media
Enquiries
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