Overview
Availability
- Dr Agnelo Furtado is:
- Available for supervision
Qualifications
- Doctor of Philosophy, The University of Queensland
Works
Search Professor Agnelo Furtado’s works on UQ eSpace
2024
Journal Article
Centromeres are hotspots for chromosomal inversions and breeding traits in mango
Wilkinson, Melanie J., McLay, Kathleen, Kainer, David, Elphinstone, Cassandra, Dillon, Natalie L., Webb, Matthew, Wijesundara, Upendra K., Ali, Asjad, Bally, Ian S. E., Munyengwa, Norman, Furtado, Agnelo, Henry, Robert J., Hardner, Craig M. and Ortiz‐Barrientos, Daniel (2024). Centromeres are hotspots for chromosomal inversions and breeding traits in mango. New Phytologist, 245 (2), 899-913. doi: 10.1111/nph.20252
2024
Journal Article
Analysis of phylogenetic relationships in Macadamia shows evidence of extensive reticulate evolution
Manatunga, Sachini Lakmini, Furtado, Agnelo, Topp, Bruce, Alam, Mobashwer, Mason, Patrick J., Kharabian-Masouleh, Ardashir and Henry, Robert J. (2024). Analysis of phylogenetic relationships in Macadamia shows evidence of extensive reticulate evolution. Frontiers in Plant Science, 15 1394244. doi: 10.3389/fpls.2024.1394244
2024
Journal Article
The genomes of Australian wild limes
Nakandala, Upuli, Furtado, Agnelo, Kharabian Masouleh, Ardashir, Smith, Malcolm W., Mason, Patrick, Williams, Darren C. and Henry, Robert J. (2024). The genomes of Australian wild limes. Plant Molecular Biology, 114 (5) 102, 102. doi: 10.1007/s11103-024-01502-4
2024
Journal Article
Harnessing the Power of an Extensive EMS‐Induced Sorghum Population for Rapid Crop Improvement
Mason, Patrick John, Blaakmeer, Anko, Furtado, Agnelo, Stuart, Peter Norman, Nomula, Rajesh, Bjarnholt, Nanna, Sørensen, Mette, Koleva, Donka Teneva, Pedas, Pai Rosager, Knudsen, Søren, Møller, Birger Lindberg, Skadhauge, Birgitte and Henry, Robert James (2024). Harnessing the Power of an Extensive EMS‐Induced Sorghum Population for Rapid Crop Improvement. Physiologia Plantarum, 176 (4) e14449, 1-9. doi: 10.1111/ppl.14449
2024
Journal Article
A chromosome‐level genome of mango exclusively from long‐read sequence data
Wijesundara, Upendra Kumari, Masouleh, Ardashir Kharabian, Furtado, Agnelo, Dillon, Natalie L. and Henry, Robert J. (2024). A chromosome‐level genome of mango exclusively from long‐read sequence data. The Plant Genome, 17 (2) e20441, 1-13. doi: 10.1002/tpg2.20441
2024
Journal Article
The genome of Citrus australasica reveals disease resistance and other species specific genes
Nakandala, Upuli, Furtado, Agnelo, Masouleh, Ardashir Kharabian, Smith, Malcolm W., Williams, Darren C. and Henry, Robert J. (2024). The genome of Citrus australasica reveals disease resistance and other species specific genes. BMC Plant Biology, 24 (1) 260, 260. doi: 10.1186/s12870-024-04988-8
2024
Journal Article
A multi-cell model for the C4 photosynthetic pathway in developing wheat grains based upon tissue-specific transcriptome data
Rangan, Parimalan, Furtado, Agnelo, Chinnusamy, Viswanathan and Henry, Robert (2024). A multi-cell model for the C4 photosynthetic pathway in developing wheat grains based upon tissue-specific transcriptome data. BioSystems, 238 105195, 105195. doi: 10.1016/j.biosystems.2024.105195
2024
Journal Article
The complex polyploid genome architecture of sugarcane
Healey, A. L., Garsmeur, O., Lovell, J. T., Shengquiang, S., Sreedasyam, A., Jenkins, J., Plott, C. B., Piperidis, N., Pompidor, N., Llaca, V., Metcalfe, C. J., Doležel, J., Cápal, P., Carlson, J. W., Hoarau, J. Y., Hervouet, C., Zini, C., Dievart, A., Lipzen, A., Williams, M., Boston, L. B., Webber, J., Keymanesh, K., Tejomurthula, S., Rajasekar, S., Suchecki, R., Furtado, A., May, G., Parakkal, P. ... D’Hont, A. (2024). The complex polyploid genome architecture of sugarcane. Nature, 628 (8009), 1-7. doi: 10.1038/s41586-024-07231-4
2024
Journal Article
Differentially expressed genes in Jojoba (Simmondsia chinensis) when subjected to water-stress
Al-Dossary, Othman, Furtado, Agnelo, Kharabian Masouleh, Ardashir, Alsubaie, Bader, Al-Mssallem, Ibrahim and Henry, Robert J. (2024). Differentially expressed genes in Jojoba (Simmondsia chinensis) when subjected to water-stress. Current Plant Biology, 37 100311, 100311. doi: 10.1016/j.cpb.2023.100311
2024
Journal Article
An improved haplotype resolved genome reveals more rice genes
Abdullah, Muhammad, Furtado, Agnelo, Masouleh, Ardashir Kharabian, Okemo, Pauline and Henry, Robert (2024). An improved haplotype resolved genome reveals more rice genes. Tropical Plants, 3 (1) e009. doi: 10.48130/tp-0024-0007
2024
Journal Article
Phylogenetic relationships in the genus <i>Mangifera</i> based on whole chloroplast genome and nuclear genome sequences
Wijesundara, Upendra Kumari, Furtado, Agnelo, Dillon, Natalie L., Masouleh, Ardashir Kharabian and Henry, Robert J (2024). Phylogenetic relationships in the genus <i>Mangifera</i> based on whole chloroplast genome and nuclear genome sequences. Tropical Plants e034, 1-16. doi: 10.48130/tp-0024-0031
2024
Journal Article
Genome sequences to support conservation and breeding of <i>Macadamia</i>
Sharma, Priyanka, Masouleh, Ardashir Kharabian, Constantin, Lena, Topp, Bruce, Furtado, Agnelo and Henry, Robert J. (2024). Genome sequences to support conservation and breeding of <i>Macadamia</i>. Tropical Plants e035, 1-11. doi: 10.48130/tp-0024-0029
2023
Journal Article
Long read sequencing to reveal the full complexity of a plant transcriptome by targeting both standard and long workflows
Al-Dossary, Othman, Furtado, Agnelo, KharabianMasouleh, Ardashir, Alsubaie, Bader, Al-Mssallem, Ibrahim and Henry, Robert J. (2023). Long read sequencing to reveal the full complexity of a plant transcriptome by targeting both standard and long workflows. Plant Methods, 19 (1) 112. doi: 10.1186/s13007-023-01091-1
2023
Journal Article
Loss of plastid ndh genes in an autotropic desert plant
Kharabian-Masouleh, Ardashir, Furtado, Agnelo, Alsubaie, Bader, Al-Dossary, Othman, Wu, Alex, Al-Mssalem, Ibrahim and Henry, Robert (2023). Loss of plastid ndh genes in an autotropic desert plant. Computational and Structural Biotechnology Journal, 21, 5016-5027. doi: 10.1016/j.csbj.2023.10.023
2023
Journal Article
Highly sex specific gene expression in Jojoba
Alsubaie, Bader, Kharabian-Masouleh, Ardashir, Furtado, Agnelo, Al-Dossary, Othman, Al-Mssallem, Ibrahim and Henry, Robert J. (2023). Highly sex specific gene expression in Jojoba. BMC Plant Biology, 23 (1) 440, 440. doi: 10.1186/s12870-023-04444-z
2023
Conference Publication
Understanding the population structure and pathogenicity of Bipolaris oryzae on commercial and wild Australian rices
Morrison, Sabrina M.L., McTaggart, Alistair R., Tran, Nga T., Geering, Andrew D. W., Furtado, Agnelo and Henry, Robert J. (2023). Understanding the population structure and pathogenicity of Bipolaris oryzae on commercial and wild Australian rices. 12th International Congress of Plant Pathology, Lyon, France, 20-25 August 2023.
2023
Journal Article
Long read transcriptome sequencing of a sugarcane hybrid and its progenitors, Saccharum officinarum and S. spontaneum
Thirugnanasambandam, Prathima Perumal, Singode, Avinash, Thalambedu, Lakshmi Pathy, Athiappan, Selvi, Krishnasamy, Mohanraj, Purakkal, Sobhakumari Valiya, Govind, Hemaprabha, Furtado, Agnelo and Henry, Robert (2023). Long read transcriptome sequencing of a sugarcane hybrid and its progenitors, Saccharum officinarum and S. spontaneum. Frontiers in Plant Science, 14 1199748, 1-15. doi: 10.3389/fpls.2023.1199748
2023
Journal Article
Haplotype resolved chromosome level genome assembly of Citrus australis reveals disease resistance and other citrus specific genes
Nakandala, Upuli, Masouleh, Ardashir Kharabian, Smith, Malcolm W., Furtado, Agnelo, Mason, Patrick, Constantin, Lena and Henry, Robert J. (2023). Haplotype resolved chromosome level genome assembly of Citrus australis reveals disease resistance and other citrus specific genes. Horticulture Research, 10 (05) uhad058, 1-14. doi: 10.1093/hr/uhad058
2023
Journal Article
Analysis of domestication loci in wild rice populations
Hasan, Sharmin, Furtado, Agnelo and Henry, Robert (2023). Analysis of domestication loci in wild rice populations. Plants, 12 (3) 489, 1-14. doi: 10.3390/plants12030489
2023
Journal Article
Organ-specific expression of genes associated with the UDP-glucose metabolism in sugarcane (Saccharum spp. hybrids)
Mason, Patrick J., Hoang, Nam V., Botha, Frederik C., Furtado, Agnelo, Marquardt, Annelie and Henry, Robert J. (2023). Organ-specific expression of genes associated with the UDP-glucose metabolism in sugarcane (Saccharum spp. hybrids). BMC Genomics, 24 (1) 18, 1-18. doi: 10.1186/s12864-023-09124-8
Funding
Current funding
Past funding
Supervision
Availability
- Dr Agnelo Furtado is:
- Available for supervision
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Supervision history
Current supervision
-
Doctor Philosophy
The identification of novel genes form Oryza austarliensis for rice improvement
Associate Advisor
Other advisors: Dr Pauline Okemo, Professor Robert Henry
-
Doctor Philosophy
Citrus genomics: chromosome-level genome assemblies, annotations, and phylogenetic relationships of Australian native species and four commercial citrus varieties
Associate Advisor
Other advisors: Professor Robert Henry
-
Doctor Philosophy
Editing nutritional traits in rice.
Associate Advisor
Other advisors: Dr Pauline Okemo, Professor Robert Henry
-
Doctor Philosophy
Genomic analysis of mechanisms of adaptive evolution
Associate Advisor
Other advisors: Dr Pauline Okemo, Professor Robert Henry
-
Doctor Philosophy
Genome diversity in the Macadamia genus
Associate Advisor
Other advisors: Professor Bruce Topp, Professor Robert Henry
-
-
Doctor Philosophy
Analysis of the contribution of non-leaf photosynthesis to growth in cereal crops
Associate Advisor
Other advisors: Dr Pauline Okemo, Professor Robert Henry
-
-
Doctor Philosophy
Genomic analysis of potential food crops in the channel country
Associate Advisor
Other advisors: Dr Pauline Okemo, Professor Robert Henry
-
Doctor Philosophy
Rice gene editing
Associate Advisor
Other advisors: Dr Pauline Okemo, Professor Robert Henry
Completed supervision
-
2024
Doctor Philosophy
The genomes of the four Macadamia species
Associate Advisor
Other advisors: Professor Bruce Topp, Professor Robert Henry
-
2023
Doctor Philosophy
Genetic basis of sexual dimorphism in Jojoba
Associate Advisor
Other advisors: Professor Robert Henry
-
2023
Doctor Philosophy
Analysis of genome and transcriptome variation in AA genome Australian wild rice
Associate Advisor
Other advisors: Professor Robert Henry
-
2023
Doctor Philosophy
Characterization of water-stress tolerance in jojoba (Simmondsia chinensis) using genomics technology
Associate Advisor
Other advisors: Professor Robert Henry
-
2022
Doctor Philosophy
Sorghum genomics: Diversity and evolution of the genus Sorghum and the role of cyanogenesis
Associate Advisor
Other advisors: Professor Robert Henry
-
2021
Doctor Philosophy
Assessment and identification of molecular markers underpinning for H. armigera Hübner resistance in Australian wild Cajanus species
Associate Advisor
Other advisors: Professor Robert Henry, Professor Yasmina Sultanbawa
-
2021
Doctor Philosophy
Metabolic and Transcriptomic Changes in the Developing Sugarcane Culm Associated with High Yield and Early-Season High Sugar Content.
Associate Advisor
Other advisors: Professor Robert Henry
-
2020
Doctor Philosophy
Analysis of biomass traits in sugarcane (Saccharum spp. hybrids)
Associate Advisor
Other advisors: Professor Robert Henry
-
2020
Doctor Philosophy
Investigating the transcriptional control of UDP-Glucose metabolism in Sugarcane
Associate Advisor
Other advisors: Professor Robert Henry
-
2019
Doctor Philosophy
Analysis of gene expression in the developing seed with the quality of wheat
Associate Advisor
Other advisors: Professor Robert Henry
-
2019
Doctor Philosophy
Canopy Position Influences on Gene Expression and Coffee Quality
Associate Advisor
Other advisors: Professor Heather Smyth, Professor Robert Henry
-
2018
Doctor Philosophy
Genetic diversity of Australian wild rice
Associate Advisor
Other advisors: Professor Robert Henry
-
2018
Doctor Philosophy
Genomic studies of biochemical compounds determining arabica coffee (Coffea arabica L.) quality
Associate Advisor
Other advisors: Professor Heather Smyth, Professor Robert Henry
-
2017
Doctor Philosophy
Analysis of genes controlling biomass traits in the genome of sugarcane (Saccharum spp. hybrids)
Associate Advisor
Other advisors: Professor Robert Henry
-
2017
Doctor Philosophy
Genomic characterization of African cultivated and wild Oryza species
Associate Advisor
Other advisors: Professor Robert Henry
-
2017
Doctor Philosophy
Grain quality of Australian wild rice (compared to domesticated rice)
Associate Advisor
Other advisors: Professor Heather Smyth, Professor Robert Henry
-
2017
Doctor Philosophy
Genomics of consumer traits in chapatti quality
Associate Advisor
Other advisors: Professor Robert Henry
-
2016
Doctor Philosophy
Genomic characterization of Australian wild rice species
Associate Advisor
Other advisors: Professor Robert Henry
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