Overview
Availability
- Dr Agnelo Furtado is:
- Available for supervision
Qualifications
- Doctor of Philosophy, The University of Queensland
Works
Search Professor Agnelo Furtado’s works on UQ eSpace
2022
Journal Article
Transcriptome and metabolome integration in sugarcane through culm development
Perlo, Virginie, Furtado, Agnelo, Botha, Frederik C., Margarido, Gabriel R. A., Hodgson‐Kratky, Katrina, Choudhary, Hemant, Gladden, John, Simmons, Blake and Henry, Robert J. (2022). Transcriptome and metabolome integration in sugarcane through culm development. Food and Energy Security, 11 (4) e421, 1-16. doi: 10.1002/fes3.421
2022
Journal Article
A haplotype resolved chromosomal level avocado genome allows analysis of novel avocado genes
Nath, Onkar, Fletcher, Stephen J., Hayward, Alice, Shaw, Lindsay M., Kharabian Masouleh, Ardashir, Furtado, Agnelo, Henry, Robert J. and Mitter, Neena (2022). A haplotype resolved chromosomal level avocado genome allows analysis of novel avocado genes. Horticulture Research, 9 uhac157, 1-10. doi: 10.1093/hr/uhac157
2022
Journal Article
The long read transcriptome of rice (oryza sativa ssp. japonica var. Nipponbare) reveals novel transcripts
Hasan, Sharmin, Huang, Lichun, Liu, Qiaoquan, Perlo, Virginie, O'Keeffe, Angela, Margarido, Gabriel Rodrigues Alves, Furtado, Agnelo and Henry, Robert J (2022). The long read transcriptome of rice (oryza sativa ssp. japonica var. Nipponbare) reveals novel transcripts. Rice, 15 (1) 29, 29. doi: 10.1186/s12284-022-00577-1
2022
Journal Article
Allele expression biases in mixed-ploid sugarcane accessions
Correr, Fernando Henrique, Furtado, Agnelo, Franco Garcia, Antonio Augusto, Henry, Robert James and Rodrigues Alves Margarido, Gabriel (2022). Allele expression biases in mixed-ploid sugarcane accessions. Scientific Reports, 12 (1) 8778, 1-10. doi: 10.1038/s41598-022-12725-0
2022
Journal Article
Potential of genome editing to capture diversity from Australian wild rice relatives
Abdullah, Muhammad, Okemo, Pauline, Furtado, Agnelo and Henry, Robert (2022). Potential of genome editing to capture diversity from Australian wild rice relatives. Frontiers in Genome Editing, 4 875243. doi: 10.3389/fgeed.2022.875243
2022
Journal Article
Reticulate evolution in AA-genome wild rice in Australia
Hasan, Sharmin, Furtado, Agnelo and Henry, Robert (2022). Reticulate evolution in AA-genome wild rice in Australia. Frontiers in Plant Science, 13 767635, 767635. doi: 10.3389/fpls.2022.767635
2022
Journal Article
Transcriptome changes in the developing sugarcane culm associated with high yield and early-season high sugar content
Perlo, Virginie, Margarido, Gabriel R. A., Botha, Frederik C., Furtado, Agnelo, Hodgson-Kratky, Katrina, Correr, Fernando H. and Henry, Robert J. (2022). Transcriptome changes in the developing sugarcane culm associated with high yield and early-season high sugar content. Theoretical and Applied Genetics, 135 (5), 1619-1636. doi: 10.1007/s00122-022-04058-3
2022
Journal Article
Transcript profiles of wild and domesticated sorghum under water-stressed conditions and the differential impact on dhurrin metabolism
Ananda, Galaihalage K. S., Norton, Sally L., Blomstedt, Cecilia, Furtado, Agnelo, Møller, Birger Lindberg, Gleadow, Roslyn and Henry, Robert J. (2022). Transcript profiles of wild and domesticated sorghum under water-stressed conditions and the differential impact on dhurrin metabolism. Planta, 255 (2) 51, 51. doi: 10.1007/s00425-022-03831-4
2022
Journal Article
A comprehensive high-quality DNA and RNA extraction protocol for a range of cultivars and tissue types of the woody crop avocado
Nath, Onkar, Fletcher, Stephen J., Hayward, Alice, Shaw, Lindsay M., Agarwal, Rimjhim, Furtado, Agnelo, Henry, Robert J. and Mitter, Neena (2022). A comprehensive high-quality DNA and RNA extraction protocol for a range of cultivars and tissue types of the woody crop avocado. Plants, 11 (3) 242, 242. doi: 10.3390/plants11030242
2022
Journal Article
Cyanogenesis in the Sorghum Genus: From Genotype to Phenotype
Cowan, Max, Møller, Birger Lindberg, Norton, Sally, Knudsen, Camilla, Crocoll, Christoph, Furtado, Agnelo, Henry, Robert, Blomstedt, Cecilia and Gleadow, Roslyn M. (2022). Cyanogenesis in the Sorghum Genus: From Genotype to Phenotype. Genes, 13 (1) 140, 1-17. doi: 10.3390/genes13010140
2022
Journal Article
Comparison of the root, leaf and internode transcriptomes in sugarcane (Saccharum spp. hybrids)
Mason, Patrick J., Hoang, Nam V., Botha, Frederik C., Furtado, Agnelo, Marquardt, Annelie and Henry, Robert J. (2022). Comparison of the root, leaf and internode transcriptomes in sugarcane (Saccharum spp. hybrids). Current Research in Biotechnology, 4, 167-178. doi: 10.1016/j.crbiot.2022.02.005
2022
Book Chapter
The use of genome sequencing to improve crops for tropical agriculture
Okemo, Pauline, Wijesundra, Upendra, Nakandala, Upuli, Ananda, Galaihalage K.S., Vanambathina, Prameela, Hasan, Sharmin, Abdulla, Muhammad, Sharma, Priyanka, Manatunga, Sachini, Pazhany, Adhini, Kharabian Masouleh, Ardy, Nath, Onkar, Mitter, Neena, Furtado, Agnelo and Henry, Robert J. (2022). The use of genome sequencing to improve crops for tropical agriculture. Next-generation sequencing and agriculture. (pp. 59-91) edited by Philipp E. Bayer and David Edwards. Wallingford, Oxfordshire, United Kingdom: CAB International. doi: 10.1079/9781789247848.0004
2021
Journal Article
Limited allele-specific gene expression in highly polyploid sugarcane
Rodrigues Alves Margarido, Gabriel, Correr, Fernando Henrique, Furtado, Agnelo, Botha, Frederik C. and Henry, Robert J. (2021). Limited allele-specific gene expression in highly polyploid sugarcane. Genome Research, 32 (2), 297-308. doi: 10.1101/gr.275904.121
2021
Journal Article
The genome of the endangered Macadamia jansenii displays little diversity but represents an important genetic resource for plant breeding
Sharma, Priyanka, Murigneux, Valentine, Haimovitz, Jasmine, Nock, Catherine J., Tian, Wei, Kharabian Masouleh, Ardashir, Topp, Bruce, Alam, Mobashwer, Furtado, Agnelo and Henry, Robert J. (2021). The genome of the endangered Macadamia jansenii displays little diversity but represents an important genetic resource for plant breeding. Plant Direct, 5 (12) e364, e364. doi: 10.1002/pld3.364
2021
Journal Article
Single kernel sorting of high and normal oleic acid peanuts using near infrared spectroscopy
O’Connor, Daniel J., Meder, Roger, Furtado, Angelo, Henry, Robert J., Wright, Graeme C. and Rachaputi, Rao C.N. (2021). Single kernel sorting of high and normal oleic acid peanuts using near infrared spectroscopy. Journal of Near Infrared Spectroscopy, 29 (6), 366-370. doi: 10.1177/09670335211053502
2021
Journal Article
Denovo chromosome level assembly of a plant genome from long read sequence data
Sharma, Priyanka, Kharabian Masouleh, Ardashir, Topp, Bruce, Furtado, Agnelo and Henry, Robert J. (2021). Denovo chromosome level assembly of a plant genome from long read sequence data. The Plant Journal, 109 (3), 727-736. doi: 10.1111/tpj.15583
2021
Journal Article
Secondary genepool of Australian Cajanus species contains sources of resistance to Helicoverpa armigera (Hübner)
Vanambathina, Prameela, Henry, Robert J., Rachaputi, Rao C. N. and Furtado, Agnelo (2021). Secondary genepool of Australian Cajanus species contains sources of resistance to Helicoverpa armigera (Hübner). Annals of Applied Biology, 180 (2), 259-272. doi: 10.1111/aab.12730
2021
Journal Article
The jojoba genome reveals wide divergence of the sex chromosomes in a dioecious plant
Al‐Dossary, Othman, Alsubaie, Bader, Kharabian‐Masouleh, Ardashir, Al‐Mssallem, Ibrahim, Furtado, Agnelo and Henry, Robert J (2021). The jojoba genome reveals wide divergence of the sex chromosomes in a dioecious plant. The Plant Journal, 108 (5), 1283-1294. doi: 10.1111/tpj.15509
2021
Journal Article
Identification of genes associated with chapatti quality using transcriptome analysis
Survase, Abhijeet, Furtado, Agnelo, Thengane, Ratnakar and Henry, Robert (2021). Identification of genes associated with chapatti quality using transcriptome analysis. Journal of Cereal Science, 101 103276, 1-11. doi: 10.1016/j.jcs.2021.103276
2021
Journal Article
Phylogenetic relationships in the Sorghum genus based on sequencing of the chloroplast and nuclear genes
Ananda, Galaihalage, Norton, Sally, Blomstedt, Cecilia, Furtado, Agnelo, Møller, Birger, Gleadow, Roslyn and Henry, Robert (2021). Phylogenetic relationships in the Sorghum genus based on sequencing of the chloroplast and nuclear genes. The Plant Genome, 14 (3) e20123, e20123. doi: 10.1002/tpg2.20123
Funding
Current funding
Past funding
Supervision
Availability
- Dr Agnelo Furtado is:
- Available for supervision
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Supervision history
Current supervision
-
Doctor Philosophy
Genomic analysis of mechanisms of adaptive evolution
Associate Advisor
Other advisors: Dr Pauline Okemo, Professor Robert Henry
-
Doctor Philosophy
Genome diversity in the Macadamia genus
Associate Advisor
Other advisors: Professor Bruce Topp, Professor Robert Henry
-
Doctor Philosophy
Analysis of the contribution of non-leaf photosynthesis to growth in cereal crops
Associate Advisor
Other advisors: Dr Pauline Okemo, Professor Robert Henry
-
-
-
Doctor Philosophy
Genomic analysis of potential food crops in the channel country
Associate Advisor
Other advisors: Dr Pauline Okemo, Professor Robert Henry
-
Doctor Philosophy
Rice gene editing
Associate Advisor
Other advisors: Dr Pauline Okemo, Professor Robert Henry
-
Doctor Philosophy
The identification of novel genes form Oryza austarliensis for rice improvement
Associate Advisor
Other advisors: Dr Pauline Okemo, Professor Robert Henry
-
Doctor Philosophy
Editing nutritional traits in rice.
Associate Advisor
Other advisors: Dr Pauline Okemo, Professor Robert Henry
Completed supervision
-
2024
Doctor Philosophy
The genomes of the four Macadamia species
Associate Advisor
Other advisors: Professor Bruce Topp, Professor Robert Henry
-
2023
Doctor Philosophy
Genetic basis of sexual dimorphism in Jojoba
Associate Advisor
Other advisors: Professor Robert Henry
-
2023
Doctor Philosophy
Analysis of genome and transcriptome variation in AA genome Australian wild rice
Associate Advisor
Other advisors: Professor Robert Henry
-
2023
Doctor Philosophy
Characterization of water-stress tolerance in jojoba (Simmondsia chinensis) using genomics technology
Associate Advisor
Other advisors: Professor Robert Henry
-
2022
Doctor Philosophy
Sorghum genomics: Diversity and evolution of the genus Sorghum and the role of cyanogenesis
Associate Advisor
Other advisors: Professor Robert Henry
-
2021
Doctor Philosophy
Assessment and identification of molecular markers underpinning for H. armigera Hübner resistance in Australian wild Cajanus species
Associate Advisor
Other advisors: Professor Robert Henry, Professor Yasmina Sultanbawa
-
2021
Doctor Philosophy
Metabolic and Transcriptomic Changes in the Developing Sugarcane Culm Associated with High Yield and Early-Season High Sugar Content.
Associate Advisor
Other advisors: Professor Robert Henry
-
2020
Doctor Philosophy
Analysis of biomass traits in sugarcane (Saccharum spp. hybrids)
Associate Advisor
Other advisors: Professor Robert Henry
-
2020
Doctor Philosophy
Investigating the transcriptional control of UDP-Glucose metabolism in Sugarcane
Associate Advisor
Other advisors: Professor Robert Henry
-
2019
Doctor Philosophy
Analysis of gene expression in the developing seed with the quality of wheat
Associate Advisor
Other advisors: Professor Robert Henry
-
2019
Doctor Philosophy
Canopy Position Influences on Gene Expression and Coffee Quality
Associate Advisor
Other advisors: Professor Heather Smyth, Professor Robert Henry
-
2018
Doctor Philosophy
Genetic diversity of Australian wild rice
Associate Advisor
Other advisors: Professor Robert Henry
-
2018
Doctor Philosophy
Genomic studies of biochemical compounds determining arabica coffee (Coffea arabica L.) quality
Associate Advisor
Other advisors: Professor Heather Smyth, Professor Robert Henry
-
2017
Doctor Philosophy
Analysis of genes controlling biomass traits in the genome of sugarcane (Saccharum spp. hybrids)
Associate Advisor
Other advisors: Professor Robert Henry
-
2017
Doctor Philosophy
Genomic characterization of African cultivated and wild Oryza species
Associate Advisor
Other advisors: Professor Robert Henry
-
2017
Doctor Philosophy
Genomics of consumer traits in chapatti quality
Associate Advisor
Other advisors: Professor Robert Henry
-
2017
Doctor Philosophy
Grain quality of Australian wild rice (compared to domesticated rice)
Associate Advisor
Other advisors: Professor Heather Smyth, Professor Robert Henry
-
2016
Doctor Philosophy
Genomic characterization of Australian wild rice species
Associate Advisor
Other advisors: Professor Robert Henry
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