Overview
Background
Biography
Senior Lecturer Dr Ramon Ganigué leads a research program on microbial biotechnologies for sustainable manufacturing, addressing critical challenges such as climate change and circular resource management. He obtained his PhD in Environmental Engineering from the University of Girona, Spain.
Prior to joining The University of Queensland (UQ), Ramon held academic and research positions across Europe and Australia, including Assistant Professor (2017–2022) and Associate Professor (2022–2026) in the Department of Biotechnology at Ghent University, Belgium, alongside postdoctoral appointments at Ghent University, the University of Girona, and UQ.
He has published over 100 peer‑reviewed articles and established extensive international collaborations spanning Europe, Australia, China, and North America. Ramon has led multiple large-scale, multi-partner research projects and, over the past five years, has secured approximately AUD 10 million in competitive European funding to support his team’s activities. In 2024, he was appointed Associate Editor of Frontiers in Bioprocess Engineering.
Research
Vision: To harness the diversity and functionality of microbial systems to enable sustainable, circular manufacturing processes that decouple production from fossil resources and support the transition to a net-zero bioeconomy.
Mission: To engineer robust, scalable microbial bioprocesses that convert complex, non-refined feedstocks into high-value products. We integrate microbial physiology, community engineering, and process design to unlock the potential of non-model microorganisms and microbiomes, while developing intensified and industrially relevant bioprocess platforms.
Dr Ramon Ganigué’s research lies at the intersection of microbial biotechnology, chemical engineering, and sustainability, with a focus on engineering microbial bioprocesses for sustainable production systems. His team applies an integrated toolbox spanning microbial physiology, community engineering, metabolic and process modelling, and bioprocess intensification to develop next-generation biotechnologies.
Central to this approach is a deep understanding of microbial physiology and metabolism. The research places particular emphasis on non-model microorganisms, including anaerobes, extremophiles, and complex microbiomes, which offer unique and underexploited capabilities for sustainable bioproduction. These systems are leveraged to convert non-refined and complex feedstocks into value-added products, such as biochemicals, biofuels, bioplastics, and alternative proteins.
A key focus of the program is addressing the operational and engineering challenges that limit industrial deployment. This includes the development of continuous, intensified, and non-axenic bioprocesses, as well as innovative reactor configurations designed to enhance robustness, efficiency, and scalability. Through this integrated approach, the research aims to bridge the gap between fundamental microbiology and industrial application, enabling practical and scalable solutions for sustainable manufacturing.
Teaching & learning contributions
Ramon is an experienced educator contributing across undergraduate and postgraduate programs. He currently lectures in key courses including Principles of Biomedical and Bioprocess Engineering (BIOE1001), Environmental Systems (ENVE2501), and the capstone Process Engineering Design Project (CHEE4001). He is also co-editor of the 2024 IWA Scientific Book Resource Recovery from Water: Principles and Application, and has contributed to MOOCs on resource recovery from wastewater and carbon capture and utilisation technologies.
Availability
- Dr Ramon Ganigue is:
- Available for supervision
Fields of research
Qualifications
- Doctor of Philosophy, Universitat de Girona
Works
Search Professor Ramon Ganigue’s works on UQ eSpace
2026
Journal Article
Assessment of recycling heat-treatment sidestreams from nucleic acid reduction as a nitrogen source in microbial protein production
Delmoitie, Brecht, Regueira, Alberte, De Wever, Heleen, Ganigue, Ramon and Sakarika, Myrsini (2026). Assessment of recycling heat-treatment sidestreams from nucleic acid reduction as a nitrogen source in microbial protein production. Bioresource Technology Reports, 34 102696, 1-10. doi: 10.1016/j.biteb.2026.102696
2026
Journal Article
Carbohydrate concentration and type drive product selectivity to a mixture of volatile fatty acids or lactic acid in thermophilic mixed-culture fermentation
Vulart, Laia, Izcara, Néstor, Estévez, Ángel, Peiro, Enrique, Gòdia, Francesc and Ganigué, Ramon (2026). Carbohydrate concentration and type drive product selectivity to a mixture of volatile fatty acids or lactic acid in thermophilic mixed-culture fermentation. Applied Microbiology and Biotechnology. doi: 10.1007/s00253-026-13806-0
2026
Journal Article
Growth and protein content of Cupriavidus necator on organic acids derived from fermented grey starch
Struk, Martin, Sakarika, Myrsini, Estévez, Ángel, Rabaey, Korneel and Ganigué, Ramon (2026). Growth and protein content of Cupriavidus necator on organic acids derived from fermented grey starch. Applied Microbiology and Biotechnology, 110 (1) 98, 1-14. doi: 10.1007/s00253-026-13780-7
2026
Journal Article
Enhancing carbon capture and utilization: mixotrophic growth of Clostridium luticellarii using methanol and hydrogen for efficient CO2 reduction
Marien, Quinten, Regueira, Alberte, Petrognani, Camille, Scarborough, Matthew and Ganigue, Ramon (2026). Enhancing carbon capture and utilization: mixotrophic growth of Clostridium luticellarii using methanol and hydrogen for efficient CO2 reduction. Bioresource Technology, 444 133886, 1-11. doi: 10.1016/j.biortech.2025.133886
2026
Journal Article
Assessing the economic viability, environmental sustainability, and scalability of microbial protein from cheese whey permeate in Europe
Delmoitie, Brecht, Regueira, Alberte, De Wever, Heleen, Ganigue, Ramon and Sakarika, Myrsini (2026). Assessing the economic viability, environmental sustainability, and scalability of microbial protein from cheese whey permeate in Europe. Chemical Engineering Journal, 529 172774, 1-14. doi: 10.1016/j.cej.2026.172774
2026
Journal Article
Dose-response effects of microaeration on thermophilic lignocellulose-based anaerobic digestion: performance, stability and microbial community dynamics
Kozera, Marcin P., Akyol, Cagri, Bouchon, Florent, Ganigue, Ramon, Willems, Bernard, Meers, Erik, Bester, Kai and Moller, Henrik B. (2026). Dose-response effects of microaeration on thermophilic lignocellulose-based anaerobic digestion: performance, stability and microbial community dynamics. Bioresource Technology Reports, 33 102593, 1-12. doi: 10.1016/j.biteb.2026.102593
2026
Journal Article
Ecophysiological characterization of thermophilic anammox process: impact of environmental conditions and wastewater constituents on the activity of a novel granular thermophilic anammox culture
Ravikumar, Badri Narayan, Carvajal-Arroyo, José M., Jia, Mingsheng and Ganigué, Ramon (2026). Ecophysiological characterization of thermophilic anammox process: impact of environmental conditions and wastewater constituents on the activity of a novel granular thermophilic anammox culture. Water Research, 292 125402, 125402. doi: 10.1016/j.watres.2026.125402
2025
Journal Article
Combined effect of feeding regime and pH on carboxylic acids production in thermophilic mixed-culture fermentation
Vulart, L., Estevez, A., Peiro, E., Godia, F. and Ganigue, R. (2025). Combined effect of feeding regime and pH on carboxylic acids production in thermophilic mixed-culture fermentation. Journal of Environmental Chemical Engineering, 13 (5) 117818, 1-12. doi: 10.1016/j.jece.2025.117818
2025
Journal Article
To ferment or not to ferment? Evaluating the impact of pre-fermentation of cheese whey permeate on microbial protein production with designed synthetic communities
Delmoitie, Brecht, Regueira, Alberte, De Wever, Heleen, Ganigue, Ramon and Sakarika, Myrsini (2025). To ferment or not to ferment? Evaluating the impact of pre-fermentation of cheese whey permeate on microbial protein production with designed synthetic communities. Journal of Environmental Chemical Engineering, 13 (5) 117831, 1-12. doi: 10.1016/j.jece.2025.117831
2025
Journal Article
Impact of temperature on butyric and caproic acid production in lactic acid chain elongation
Sabbe, Kevin, Boon, Nico and Ganigue, Ramon (2025). Impact of temperature on butyric and caproic acid production in lactic acid chain elongation. Journal of Environmental Chemical Engineering, 13 (5) 119152, 1-13. doi: 10.1016/j.jece.2025.119152
2025
Journal Article
Granulation of a planktonic thermophilic anammox culture enables high rate nitrogen removal from warm nitrogen rich wastewater: A proof of concept
Ravikumar, Badri Narayan, Jia, Mingsheng, Geleyn, Charlotte, De Beer, Thomas, Carvajal-Arroyo, Jose M. and Ganigue, Ramon (2025). Granulation of a planktonic thermophilic anammox culture enables high rate nitrogen removal from warm nitrogen rich wastewater: A proof of concept. Chemical Engineering Journal, 519 165529, 1-15. doi: 10.1016/j.cej.2025.165529
2025
Journal Article
Large-sized aerobic granular biofilm: stable biotechnology to improve nitrogen removal and reduce sludge yield
Ma, Haibo, Chen, Sihao, Lv, Linhuan, Ye, Zhou, Yang, Jiaqi, Wang, Binbin, Zou, Jinte, Li, Jun and Ganigue, Ramon (2025). Large-sized aerobic granular biofilm: stable biotechnology to improve nitrogen removal and reduce sludge yield. Bioresource Technology, 429 132543, 1-10. doi: 10.1016/j.biortech.2025.132543
2025
Journal Article
Characterization of solvents and extractants for selective recovery of n-caproic acid
Fernandez-Blancoa, Carla, Sabbeb, Kevin, Veigaa, Maria C., Kennesa, Christian and Ganigue, Ramon (2025). Characterization of solvents and extractants for selective recovery of n-caproic acid. Separation and Purification Technology, 361 131411, 1-9. doi: 10.1016/j.seppur.2025.131411
2025
Journal Article
Implementation of a Clostridium luticellarii genome-scale model for upgrading syngas fermentations
Scott, William T., Rockx, Siemen, Marien, Quinten, Regueira, Alberte, Candry, Pieter, Ganigue, Ramon, Koehorst, Jasper J. and Schaap, Peter J. (2025). Implementation of a Clostridium luticellarii genome-scale model for upgrading syngas fermentations. Computational and Structural Biotechnology Journal, 27, 649-660. doi: 10.1016/j.csbj.2025.01.013
2024
Journal Article
Editorial: Microbial biorefineries for a more sustainable, circular economy
Sakarika, Myrsini, Matassa, Silvio, Carvajal-Arroyo, Jose M. and Ganigue, Ramon (2024). Editorial: Microbial biorefineries for a more sustainable, circular economy. Frontiers in Bioengineering and Biotechnology, 12 1512756. doi: 10.3389/fbioe.2024.1512756
2024
Journal Article
Isobutyric and n-butyric acid production from H2 and CO2 by Clostridium luticellarii in a hollow fiber membrane biofilm reactor: Reactor operation and process modelling
Marien, Quinten, Flores-Alsina, Xavier, Aslam, Umair, Gernaey, Krist V., Regueira, Alberte and Ganigue, Ramon (2024). Isobutyric and n-butyric acid production from H2 and CO2 by Clostridium luticellarii in a hollow fiber membrane biofilm reactor: Reactor operation and process modelling. Chemical Engineering Journal, 495 153216, 1-13. doi: 10.1016/j.cej.2024.153216
2024
Journal Article
Comprehensive comparative study on n-caproate production by Clostridium kluyveri: batch vs. continuous operation modes
Fernandez-Blanco, Carla, Pereira, Alexandra, Veiga, Maria C., Kennes, Christian and Ganigue, Ramon (2024). Comprehensive comparative study on n-caproate production by Clostridium kluyveri: batch vs. continuous operation modes. Bioresource Technology, 408 131138, 1-9. doi: 10.1016/j.biortech.2024.131138
2024
Journal Article
Editorial: Microbial chain elongation-carbon recovering biorefineries for the circular economy
Strik, David P. B. T. B. and Ganigue, Ramon (2024). Editorial: Microbial chain elongation-carbon recovering biorefineries for the circular economy. Frontiers in Bioengineering and Biotechnology, 12 1448975. doi: 10.3389/fbioe.2024.1448975
2024
Journal Article
Conditions for successful nitrogen removal from source-separated urine by partial nitritation/anammox
Faust, Valentin, Markus, Philipp, Schielke-Jenni, Sarina, Timmer, Marijn J., De Paepe, Jolien, Ganigue, Ramon, Vlaeminck, Siegfried E. and Udert, Kai M. (2024). Conditions for successful nitrogen removal from source-separated urine by partial nitritation/anammox. PLoS Water, 3 (5) e0000235, 1-23. doi: 10.1371/journal.pwat.0000235
2024
Journal Article
Resource-efficient nitrogen removal from source-separated urine with partial nitritation/anammox in a membrane-aerated biofilm reactor
Timmer, Marijn J., De Paepe, Jolien, Van Winckel, Tim, Spiller, Marc, Spacova, Irina, De Paepe, Kim, Pintelon, Isabel, Lebeer, Sarah, De Vos, Winnok H., Lasseur, Christophe, Ganigue, Ramon, Udert, Kai M. and Vlaeminck, Siegfried E. (2024). Resource-efficient nitrogen removal from source-separated urine with partial nitritation/anammox in a membrane-aerated biofilm reactor. ACS ES&T Engineering, 4 (7), 1609-1621. doi: 10.1021/acsestengg.4c00058
Funding
Past funding
Supervision
Availability
- Dr Ramon Ganigue is:
- Available for supervision
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