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2017

Conference Publication

GWAS of educational attainment: phase 3-main results

Okbay, Aysu, Wedow, Robbee, Kong, Edward, Turley, Patrick, Lee, James, Zacher, Meghan, Thom, Kevin, Anh Tuan Nguyen, , Maghzian, Omeed, Linner, Richard Karlsson, Robinson, Matthew, Visscher, Peter, Benjamin, Daniel and Cesarini, David (2017). GWAS of educational attainment: phase 3-main results. 47th Annual Meeting of the Behavior-Genetics-Association (BGA), Oslo Norway, Jun 28-Jul 01, 2017. NEW YORK: SPRINGER.

GWAS of educational attainment: phase 3-main results

2017

Journal Article

Cross-ethnic meta-analysis identifies association of the GPX3-TNIP1 locus with amyotrophic lateral sclerosis

Benyamin, Beben, He, Ji, Zhao, Qiongyi, Gratten, Jacob, Garton, Fleur, Leo, Paul J., Liu, Zhijun, Mangelsdorf, Marie, Al-Chalabi, Ammar, Anderson, Lisa, Butler, Timothy J., Chen, Lu, Chen, Xiang-Ding, Cremin, Katie, Deng, Hong-Weng, Devine, Matthew, Edson, Janette, Fifita, Jennifer A., Furlong, Sarah, Han, Ying-Ying, Harris, Jessica, Henders, Anjali K., Jeffree, Rosalind L., Jin, Zi-Bing, Li, Zhongshan, Li, Ting, Li, Mengmeng, Lin, Yong, Liu, Xiaolu ... Fan, Dongsheng (2017). Cross-ethnic meta-analysis identifies association of the GPX3-TNIP1 locus with amyotrophic lateral sclerosis. Nature Communications, 8 (1) 611, 611. doi: 10.1038/s41467-017-00471-1

Cross-ethnic meta-analysis identifies association of the GPX3-TNIP1 locus with amyotrophic lateral sclerosis

2017

Journal Article

Genetic correlations reveal the shared genetic architecture of transcription in human peripheral blood

Lukowski, Samuel W., Lloyd-Jones, Luke R., Holloway, Alexander, Kirsten, Holger, Hemani, Gibran, Yang, Jian, Small, Kerrin, Zhao, Jing, Metspalu, Andres, Dermitzakis, Emmanouil T., Gibson, Greg, Spector, Timothy D., Thiery, Joachim, Scholz, Markus, Montgomery, Grant W., Esko, Tonu, Visscher, Peter M. and Powell, Joseph E. (2017). Genetic correlations reveal the shared genetic architecture of transcription in human peripheral blood. Nature Communications, 8 (483) 483, 483. doi: 10.1038/s41467-017-00473-z

Genetic correlations reveal the shared genetic architecture of transcription in human peripheral blood

2017

Journal Article

Concepts, estimation and interpretation of SNP-based heritability

Yang, Jian, Zeng, Jian, Goddard, Michael E., Wray, Naomi R. and Visscher, Peter M. (2017). Concepts, estimation and interpretation of SNP-based heritability. Nature Genetics, 49 (9), 1304-1310. doi: 10.1038/ng.3941

Concepts, estimation and interpretation of SNP-based heritability

2017

Journal Article

Performance of risk prediction for inflammatory bowel disease based on genotyping platform and genomic risk score method

Chen, Guo-Bo, Lee, Sang Hong, Montgomery, Grant W., Wray, Naomi R., Visscher, Peter M., Gearry, Richard B., Lawrance, Ian C., Andrews, Jane M., Bampton, Peter, Mahy, Gillian, Bell, Sally, Walsh, Alissa, Connor, Susan, Sparrow, Miles, Bowdler, Lisa M., Simms, Lisa A., Krishnaprasad, Krupa, Radford-Smith, Graham L. and Moser, Gerhard (2017). Performance of risk prediction for inflammatory bowel disease based on genotyping platform and genomic risk score method. BMC Medical Genetics, 18 (1) 94, 94. doi: 10.1186/s12881-017-0451-2

Performance of risk prediction for inflammatory bowel disease based on genotyping platform and genomic risk score method

2017

Journal Article

Embracing polygenicity: a review of methods and tools for psychiatric genetics research

Maier, R. M., Visscher, P. M., Robinson, M. R. and Wray, N. R. (2017). Embracing polygenicity: a review of methods and tools for psychiatric genetics research. Psychological Medicine, 48 (7), 1055-1067. doi: 10.1017/s0033291717002318

Embracing polygenicity: a review of methods and tools for psychiatric genetics research

2017

Journal Article

Detection and quantification of inbreeding depression for complex traits from SNP data

Yengo, Loic, Zhu, Zhihong, Wray, Naomi R., Weir, Bruce S., Yang, Jian, Robinson, Matthew R. and Visscher, Peter M. (2017). Detection and quantification of inbreeding depression for complex traits from SNP data. PNAS: Proceedings of the National Academy of Sciences of the United States of America, 114 (32), 8602-8607. doi: 10.1073/pnas.1621096114

Detection and quantification of inbreeding depression for complex traits from SNP data

2017

Journal Article

<i>CKM</i> Glu83Gly Is Associated With Blunted Creatine Kinase Variation, but Not With Myalgia

Siddiqui, Moneeza Kalhan, Veluchamy, Abirami, Maroteau, Cyrielle, Tavendale, Roger, Carr, Fiona, Pearson, Ewan, Colhoun, Helen, Morris, Andrew D., George, Jacob, Doney, Alexander, Pirmohamed, Munir, Alfirevic, Ana, Wadelius, Mia, van der Zee, Anke H. Maitland, Ridker, Paul M., Chasman, Daniel I. and Palmer, Colin N. A. (2017). CKM Glu83Gly Is Associated With Blunted Creatine Kinase Variation, but Not With Myalgia. Circulation-Cardiovascular Genetics, 10 (4) e001737. doi: 10.1161/CIRCGENETICS.117.001737

<i>CKM</i> Glu83Gly Is Associated With Blunted Creatine Kinase Variation, but Not With Myalgia

2017

Journal Article

Constraints on eQTL fine mapping in the presence of multisite local regulation of gene expression

Zeng, Biao, Lloyd-Jones, Luke R., Holloway, Alexander, Marigorta, Urko M., Metspalu, Andres, Montgomery, Grant W., Esko, Tonu, Brigham, Kenneth L., Quyyumi, Arshed A., Idaghdour, Youssef, Yang, Jian, Visscher, Peter M., Powell, Joseph E. and Gibson, Greg (2017). Constraints on eQTL fine mapping in the presence of multisite local regulation of gene expression. G3: Genes Genomes Genetics, 7 (8), 2533-2544. doi: 10.1534/g3.117.043752

Constraints on eQTL fine mapping in the presence of multisite local regulation of gene expression

2017

Other Outputs

Causal associations between risk factors and common diseases inferred from GWAS summary data

Zhu, Zhihong, Zheng, Zhili, Zhang, Futao, Wu, Yang, Trzaskowski, Maciej, Maier, Robert, Robinson, Matthew R., McGrath, John J., Visscher, Peter M., Wray, Naomi R. and Yang, Jian (2017). Causal associations between risk factors and common diseases inferred from GWAS summary data. doi: 10.1101/168674

Causal associations between risk factors and common diseases inferred from GWAS summary data

2017

Journal Article

Genotype-covariate interaction effects and the heritability of adult body mass index

Robinson, Matthew R., English, Geoffrey, Moser, Gerhard, Lloyd-Jones, Luke R., Triplett, Marcus A., Zhu, Zhihong, Nolte, Ilja M., Van Vliet-Ostaptchouk, Jana V., Snieder, Harold, Esko, Tonu, Milani, Lili, Magi, Reedik, Metspalu, Andres, Magnusson, Patrik K. E., Pedersen, Nancy L., Ingelsson, Erik, Johannesson, Magnus, Yang, Jian, Cesarini, David and Visscher, Peter M. (2017). Genotype-covariate interaction effects and the heritability of adult body mass index. Nature Genetics, 49 (8), 1174-1181. doi: 10.1038/ng.3912

Genotype-covariate interaction effects and the heritability of adult body mass index

2017

Journal Article

10 years of GWAS discovery: biology, function, and translation

Visscher, Peter M., Wray, Naomi R., Zhang, Qian, Sklar, Pamela, McCarthy, Mark I., Brown, Matthew A. and Yang, Jian (2017). 10 years of GWAS discovery: biology, function, and translation. American Journal of Human Genetics, 101 (1), 5-22. doi: 10.1016/j.ajhg.2017.06.005

10 years of GWAS discovery: biology, function, and translation

2017

Journal Article

Whole exome sequencing and DNA methylation analysis in a clinical amyotrophic lateral sclerosis cohort

Garton, Fleur C., Benyamin, Beben, Zhao, Qiongyi, Liu, Zhijun, Gratten, Jacob, Henders, Anjali K., Zhang, Zong-Hong, Edson, Janette, Furlong, Sarah, Morgan, Sarah, Heggie, Susan, Thorpe, Kathryn, Pfluger, Casey, Mather, Karen A., Sachdev, Perminder S., McRae, Allan F., Robinson, Matthew R., Shah, Sonia, Visscher, Peter M., Mangelsdorf, Marie, Henderson, Robert D., Wray, Naomi R. and McCombe, Pamela A. (2017). Whole exome sequencing and DNA methylation analysis in a clinical amyotrophic lateral sclerosis cohort. Molecular Genetics and Genomic Medicine, 5 (4), 418-428. doi: 10.1002/mgg3.302

Whole exome sequencing and DNA methylation analysis in a clinical amyotrophic lateral sclerosis cohort

2017

Other Outputs

Widespread signatures of negative selection in the genetic architecture of human complex traits

Zeng, Jian, de Vlaming, Ronald, Wu, Yang, Robinson, Matthew R, Lloyd-Jones, Luke, Yengo, Loic, Yap, Chloe, Xue, Angli, Sidorenko, Julia, McRae, Allan F, Powell, Joseph E, Montgomery, Grant W, Metspalu, Andres, Esko, Tonu, Gibson, Greg, Wray, Naomi R, Visscher, Peter M and Yang, Jian (2017). Widespread signatures of negative selection in the genetic architecture of human complex traits. doi: 10.1101/145755

Widespread signatures of negative selection in the genetic architecture of human complex traits

2017

Journal Article

Inference on the genetic basis of eye and skin color in an admixed population via Bayesian linear mixed models

Lloyd-Jones, Luke R., Robinson, Matthew R., Moser, Gerhard, Zeng, Jian, Beleza, Sandra, Barsh, Gregory S., Tang, Hua and Visscher, Peter M. (2017). Inference on the genetic basis of eye and skin color in an admixed population via Bayesian linear mixed models. Genetics, 206 (2), 1113-1126. doi: 10.1534/genetics.116.193383

Inference on the genetic basis of eye and skin color in an admixed population via Bayesian linear mixed models

2017

Journal Article

Quantifying the mapping precision of genome-wide association studies using whole-genome sequencing data

Wu, Yang, Zheng, Zhili, Visscher, Peter M. and Yang, Jian (2017). Quantifying the mapping precision of genome-wide association studies using whole-genome sequencing data. Genome Biology, 18 (1) 86, 86. doi: 10.1186/s13059-017-1216-0

Quantifying the mapping precision of genome-wide association studies using whole-genome sequencing data

2017

Journal Article

A Study of the Microbial Spatial Heterogeneity of Bahamian Thrombolites Using Molecular, Biochemical, and Stable Isotope Analyses

Louyakis, Artemis S., Mobberley, Jennifer M., Vitek, Brooke E., Visscher, Pieter T., Hagan, Paul D., Reid, R. Pamela, Kozdon, Reinhard, Orland, Ian J., Valley, John W., Planavsky, Noah J., Casaburi, Giorgio and Foster, Jamie S. (2017). A Study of the Microbial Spatial Heterogeneity of Bahamian Thrombolites Using Molecular, Biochemical, and Stable Isotope Analyses. Astrobiology, 17 (5), 413-430. doi: 10.1089/ast.2016.1563

A Study of the Microbial Spatial Heterogeneity of Bahamian Thrombolites Using Molecular, Biochemical, and Stable Isotope Analyses

2017

Journal Article

Genetic signatures of high-altitude adaptation in Tibetans

Yang, Jian, Jin, Zi-Bing, Chen, Jie, Huang, Xiu-Feng, Li, Xiao-Man, Liang, Yuan-Bo, Mao, Jian-Yang, Chen, Xin, Zheng, Zhili, Bakshi, Andrew, Zheng, Dong-Dong, Zheng, Mei-Qin, Wray, Naomi R., Visscher, Peter M., Lu, Fan and Qu, Jia (2017). Genetic signatures of high-altitude adaptation in Tibetans. Proceedings of the National Academy of Sciences, 114 (16), 4189-4194. doi: 10.1073/pnas.1617042114

Genetic signatures of high-altitude adaptation in Tibetans

2017

Journal Article

Dynamics of archaea at fine spatial scales in Shark Bay mat microbiomes

Wong, Hon Lun, Visscher, Pieter T., White, Richard Allen, Smith, Daniela-Lee, Patterson, Molly M. and Burns, Brendan P. (2017). Dynamics of archaea at fine spatial scales in Shark Bay mat microbiomes. Scientific Reports, 7 46160. doi: 10.1038/srep46160

Dynamics of archaea at fine spatial scales in Shark Bay mat microbiomes

2017

Journal Article

Risk factors for neuropathic pain in diabetes mellitus

Hebert, Harry L., Veluchamy, Abirami, Torrance, Nicola and Smith, Blair H. (2017). Risk factors for neuropathic pain in diabetes mellitus. Pain, 158 (4), 560-568. doi: 10.1097/j.pain.0000000000000785

Risk factors for neuropathic pain in diabetes mellitus