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2019

Journal Article

Parkinson's disease age at onset genome-wide association study: defining heritability, genetic loci, and α-synuclein mechanisms

Blauwendraat, Cornelis, Heilbron, Karl, Vallerga, Costanza L., Bandres-Ciga, Sara, von Coelln, Rainer, Pihlstrøm, Lasse, Simón-Sánchez, Javier, Schulte, Claudia, Sharma, Manu, Krohn, Lynne, Siitonen, Ari, Iwaki, Hirotaka, Leonard, Hampton, Noyce, Alastair J., Tan, Manuela, Gibbs, J. Raphael, Hernandez, Dena G., Scholz, Sonja W., Jankovic, Joseph, Shulman, Lisa M., Lesage, Suzanne, Corvol, Jean-Christophe, Brice, Alexis, van Hilten, Jacobus J., Marinus, Johan, Eerola-Rautio, Johanna, Tienari, Pentti, Majamaa, Kari, Toft, Mathias ... Singleton, Andrew B. (2019). Parkinson's disease age at onset genome-wide association study: defining heritability, genetic loci, and α-synuclein mechanisms. Movement Disorders, 34 (6) mds.27659, 866-875. doi: 10.1002/mds.27659

Parkinson's disease age at onset genome-wide association study: defining heritability, genetic loci, and α-synuclein mechanisms

2019

Journal Article

Publisher Correction: Gene expression imputation across multiple brain regions provides insights into schizophrenia risk (Nature Genetics, (2019), 51, 4, (659-674), 10.1038/s41588-019-0364-4)

Huckins, Laura M., Dobbyn, Amanda, Ruderfer, Douglas M., Hoffman, Gabriel, Wang, Weiqing, Pardiñas, Antonio F., Rajagopal, Veera M., Als, Thomas D., T. Nguyen, Hoang, Girdhar, Kiran, Boocock, James, Roussos, Panos, Fromer, Menachem, Kramer, Robin, Domenici, Enrico, Gamazon, Eric R., Purcell, Shaun, Johnson, Jessica S., Shah, Hardik R., Klein, Lambertus L., Dang, Kristen K., Logsdon, Benjamin A., Mahajan, Milind C., Mangravite, Lara M., Toyoshiba, Hiroyoshi, Gur, Raquel E., Hahn, Chang-Gyu, Schadt, Eric, Lewis, David A. ... Stahl, Eli A. (2019). Publisher Correction: Gene expression imputation across multiple brain regions provides insights into schizophrenia risk (Nature Genetics, (2019), 51, 4, (659-674), 10.1038/s41588-019-0364-4). Nature Genetics, 51 (6), 1068-1068. doi: 10.1038/s41588-019-0435-6

Publisher Correction: Gene expression imputation across multiple brain regions provides insights into schizophrenia risk (Nature Genetics, (2019), 51, 4, (659-674), 10.1038/s41588-019-0364-4)

2019

Journal Article

The Role of the Substrate on the Mineralization Potential of Microbial Mats in A Modern Freshwater River (Paris Basin, France)

Roche, Adeline, Vennin, Emmanuelle, Bundeleva, Irina, Bouton, Anthony, Payandi-Rolland, Dahedrey, Amiotte-Suchet, Philippe, Gaucher, Eric C., Courvoisier, Helene and Visscher, Pieter T. (2019). The Role of the Substrate on the Mineralization Potential of Microbial Mats in A Modern Freshwater River (Paris Basin, France). Minerals, 9 (6) 359, 359. doi: 10.3390/min9060359

The Role of the Substrate on the Mineralization Potential of Microbial Mats in A Modern Freshwater River (Paris Basin, France)

2019

Journal Article

Global importance of oxic molybdenum sinks prior to 2.6 Ga revealed by the Mo isotope composition of Precambrian carbonates

Thoby, Marie, Konhauser, Kurt O., Fralick, Philip W., Altermann, Wladyslaw, Visscher, Pieter T. and Lalonde, Stefan (2019). Global importance of oxic molybdenum sinks prior to 2.6 Ga revealed by the Mo isotope composition of Precambrian carbonates. Geology, 47 (6), 559-562. doi: 10.1130/G45706.1

Global importance of oxic molybdenum sinks prior to 2.6 Ga revealed by the Mo isotope composition of Precambrian carbonates

2019

Journal Article

OSCA: a tool for omic-data-based complex trait analysis

Zhang, Futao, Chen, Wenhan, Zhu, Zhihong, Zhang, Qian, Nabais, Marta F., Qi, Ting, Deary, Ian J., Wray, Naomi R., Visscher, Peter M., McRae, Allan F. and Yang, Jian (2019). OSCA: a tool for omic-data-based complex trait analysis. Genome Biology, 20 (1) 107, 107. doi: 10.1186/s13059-019-1718-z

OSCA: a tool for omic-data-based complex trait analysis

2019

Other Outputs

No evidence for social genetic effects or genetic similarity among friends beyond that due to population stratification: a reappraisal of Domingue et al (2018)

Yengo, Loic, Sidari, Morgan, Verweij, Karin J. H., Visscher, Peter M., Keller, Matthew C. and Zietsch, Brendan P. (2019). No evidence for social genetic effects or genetic similarity among friends beyond that due to population stratification: a reappraisal of Domingue et al (2018). doi: 10.1101/643304

No evidence for social genetic effects or genetic similarity among friends beyond that due to population stratification: a reappraisal of Domingue et al (2018)

2019

Journal Article

Exploring the role of genetic confounding in the association between maternal and offspring body mass index: evidence from three birth cohorts

Bond, Tom A., Karhunen, Ville, Wielscher, Matthias, Auvinen, Juha, Männikkö, Minna, Keinänen-Kiukaanniemi, Sirkka, Gunter, Marc J., Felix, Janine F., Prokopenko, Inga, Yang, Jian, Visscher, Peter M., Evans, David M, Sebert, Sylvain, Lewin, Alex, O’Reilly, Paul F., Lawlor, Debbie A. and Jarvelin, Marjo-Riitta (2019). Exploring the role of genetic confounding in the association between maternal and offspring body mass index: evidence from three birth cohorts. International Journal of Epidemiology, 49 (1), 233-243. doi: 10.1093/ije/dyz095

Exploring the role of genetic confounding in the association between maternal and offspring body mass index: evidence from three birth cohorts

2019

Journal Article

Tissue-specific sex-differences in human gene expression

Kassam, Irfahan, Wu, Yang, Yang, Jian, Visscher, Peter M. and McRae, Allan F. (2019). Tissue-specific sex-differences in human gene expression. Human Molecular Genetics, 28 (17), 2976-2986. doi: 10.1093/hmg/ddz090

Tissue-specific sex-differences in human gene expression

2019

Journal Article

Examining the impact of imputation errors on fine-mapping using DNA methylation QTL as a model trait

Chundru, V. Kartik, Marioni, Riccardo E., Prendergast, James G. D., Vallerga, Costanza L., Lin, Tian, Berveridge, Allan J., SGPD Consortium, Gratten, Jacob, Hume, David A., Deary, Ian J., Wray, Naomi R., Visscher, Peter M. and McRae, Allan F. (2019). Examining the impact of imputation errors on fine-mapping using DNA methylation QTL as a model trait. Genetics, 212 (3), 577-586. doi: 10.1534/genetics.118.301861

Examining the impact of imputation errors on fine-mapping using DNA methylation QTL as a model trait

2019

Journal Article

Bi-allelic Loss-of-Function CACNA1B Mutations in Progressive Epilepsy-Dyskinesia

Gorman, Kathleen M., Meyer, Esther, Grozeva, Detelina, Spinelli, Egidio, McTague, Amy, Sanchis-Juan, Alba, Carss, Keren J., Bryant, Emily, Reich, Adi, Schneider, Amy L., Pressler, Ronit M., Simpson, Michael A., Debelle, Geoff D., Wassmer, Evangeline, Morton, Jenny, Sieciechowicz, Diana, Jan-Kamsteeg, Eric, Paciorkowski, Alex R., King, Mary D., Cross, J. Helen, Poduri, Annapurna, Mefford, Heather C., Scheffer, Ingrid E., Haack, Tobias B., McCullagh, Gary, McRae, Jeremy F., Clayton, Stephen, Fitzgerald, Tomas W., Kaplanis, Joanna ... UK10K Consortium (2019). Bi-allelic Loss-of-Function CACNA1B Mutations in Progressive Epilepsy-Dyskinesia. American Journal of Human Genetics, 104 (5), 948-956. doi: 10.1016/j.ajhg.2019.03.005

Bi-allelic Loss-of-Function CACNA1B Mutations in Progressive Epilepsy-Dyskinesia

2019

Journal Article

Genome-wide association study of medication-use and associated disease in the UK Biobank

Wu, Yeda, Byrne, Enda M., Zheng, Zhili, Kemper, Kathryn E., Yengo, Loic, Mallett, Andrew J., Yang, Jian, Visscher, Peter M. and Wray, Naomi R. (2019). Genome-wide association study of medication-use and associated disease in the UK Biobank. Nature Communications, 10 (1) 1891, 1891. doi: 10.1038/s41467-019-09572-5

Genome-wide association study of medication-use and associated disease in the UK Biobank

2019

Journal Article

Moving beyond neurons: the role of cell type-specific gene regulation in Parkinson's disease heritability

Reynolds, Regina H., Botia, Juan, Nalls, Mike A., Hardy, John, Taliun, Sarah A. Gagliano, Ryten, Mina, Noyce, Alastair J., Nicolas, Aude, Cookson, Mark R., Bandres-Ciga, Sara, Gibbs, J. Raphael, Hernandez, Dena G., Singleton, Andrew B., Reed, Xylena, Leonard, Hampton, Blauwendraat, Cornelis, Faghri, Faraz, Bras, Jose, Guerreiro, Rita, Tucci, Arianna, Kia, Demis A., Houlden, Henry, Plun-Favreau, Helene, Mok, Kin Y., Wood, Nicholas W., Lovering, Ruth, R'Bibo, Lea, Rizig, Mie, Chelban, Viorica ... Pearson, John (2019). Moving beyond neurons: the role of cell type-specific gene regulation in Parkinson's disease heritability. Npj Parkinsons Disease, 5 (1) 6, 6. doi: 10.1038/s41531-019-0076-6

Moving beyond neurons: the role of cell type-specific gene regulation in Parkinson's disease heritability

2019

Journal Article

Steroid receptor coactivator-1 modulates the function of Pomc neurons and energy homeostasis

Yang, Yongjie, van der Klaauw, Agatha A., Zhu, Liangru, Cacciottolo, Tessa M., He, Yanlin, Stadler, Lukas K. J., Wang, Chunmei, Xu, Pingwen, Saito, Kenji, Hinton, Antentor, Yan, Xiaofeng, Keogh, Julia M., Henning, Elana, Banton, Matthew C., Hendricks, Audrey E., Bochukova, Elena G., Mistry, Vanisha, Lawler, Katherine L., Liao, Lan, Xu, Jianming, O'Rahilly, Stephen, Tong, Qingchun, Barroso, Ines, O'Malley, Bert W., Farooqi, I. Sadaf, Xu, Yong, Balasubramanian, Senduran, Clapham, Peter, Coates, Guy ... Zhang, Weihua (2019). Steroid receptor coactivator-1 modulates the function of Pomc neurons and energy homeostasis. Nature Communications, 10 (1) 1718. doi: 10.1038/s41467-019-08737-6

Steroid receptor coactivator-1 modulates the function of Pomc neurons and energy homeostasis

2019

Other Outputs

An epigenome-wide association study of sex-specific chronological ageing

McCartney, Daniel L., Hillary, Robert F., Zhang, Qian, Stevenson, Anna J., Walker, Rosie M., Bermingham, Mairead L., Morris, Stewart W., Campbell, Archie, Murray, Alison D., Whalley, Heather C., Porteous, David J., Evans, Kathryn L., Chandra, Tamir, Deary, Ian J., McIntosh, Andrew M., Visscher, Peter M., McRae, Allan F. and Marioni, Riccardo E. (2019). An epigenome-wide association study of sex-specific chronological ageing. doi: 10.1101/606020

An epigenome-wide association study of sex-specific chronological ageing

2019

Journal Article

From R.A. Fisher’s 1918 paper to GWAS a century later

Visscher, Peter M. and Goddard, Michael E. (2019). From R.A. Fisher’s 1918 paper to GWAS a century later. Genetics, 211 (4), 1125-1130. doi: 10.1534/genetics.118.301594

From R.A. Fisher’s 1918 paper to GWAS a century later

2019

Journal Article

Isolation of novel quorum-sensing active bacteria from microbial mats in Shark Bay Australia

Charlesworth, James C., Watters, Cara, Wong, Hon Lun, Visscher, Pieter T. and Burns, Brendan P. (2019). Isolation of novel quorum-sensing active bacteria from microbial mats in Shark Bay Australia. Fems Microbiology Ecology, 95 (4) fiz035. doi: 10.1093/femsec/fiz035

Isolation of novel quorum-sensing active bacteria from microbial mats in Shark Bay Australia

2019

Journal Article

Population-based identity-by-descent mapping combined with exome sequencing to detect rare risk variants for schizophrenia

Harold, Denise, Connolly, Siobhan, Riley, Brien P., Kendler, Kenneth S., McCarthy, Shane E., McCombie, William R., Richards, Alex, Owen, Michael J., O'Donovan, Michael C., Walters, James, Donnelly, Peter, Bates, Lesley, Barroso, Ines, Blackwell, Jenefer M., Bramon, Elvira, Brown, Matthew A., Casas, Juan P., Corvin, Aiden, Deloukas, Panos, Duncanson, Audrey, Jankowski, Janusz, Markus, Hugh S., Mathew, Christopher G., Palmer, Colin N. A., Plomin, Robert, Rautanen, Anna, Sawcer, Stephen J., Trembath, Richard C., Viswanathan, Ananth C. ... Morris, Derek W. (2019). Population-based identity-by-descent mapping combined with exome sequencing to detect rare risk variants for schizophrenia. American Journal of Medical Genetics, Part B: Neuropsychiatric Genetics, 180 (3), 223-231. doi: 10.1002/ajmg.b.32716

Population-based identity-by-descent mapping combined with exome sequencing to detect rare risk variants for schizophrenia

2019

Journal Article

Gene expression imputation across multiple brain regions provides insights into schizophrenia risk

Huckins, Laura M., Dobbyn, Amanda, Ruderfer, Douglas M., Hoffman, Gabriel, Wang, Weiqing, Pardiñas, Antonio F., Rajagopal, Veera M., Als, Thomas D., T. Nguyen, Hoang, Girdhar, Kiran, Boocock, James, Roussos, Panos, Fromer, Menachem, Kramer, Robin, Domenici, Enrico, Gamazon, Eric R., Purcell, Shaun, Johnson, Jessica S., Shah, Hardik R., Klein, Lambertus L., Dang, Kristen K., Logsdon, Benjamin A., Mahajan, Milind C., Mangravite, Lara M., Toyoshiba, Hiroyoshi, Gur, Raquel E., Hahn, Chang-Gyu, Schadt, Eric, Lewis, David A. ... Stahl, Eli A. (2019). Gene expression imputation across multiple brain regions provides insights into schizophrenia risk. Nature Genetics, 51 (4), 659-674. doi: 10.1038/s41588-019-0364-4

Gene expression imputation across multiple brain regions provides insights into schizophrenia risk

2019

Journal Article

Complex trait prediction from genome data: contrasting EBV in livestock to PRS in humans: genomic prediction

Wray, Naomi R., Kemper, Kathryn E., Hayes, Benjamin J., Goddard, Michael E. and Visscher, Peter M. (2019). Complex trait prediction from genome data: contrasting EBV in livestock to PRS in humans: genomic prediction. Genetics, 211 (4), 1131-1141. doi: 10.1534/genetics.119.301859

Complex trait prediction from genome data: contrasting EBV in livestock to PRS in humans: genomic prediction

2019

Journal Article

Assessment of bidirectional relationships between physical activity and depression among adults A 2-Sample mendelian randomization study

Choi, Karmel W., Chen, Chia-Yen, Stein, Murray B., Klimentidis, Yann C., Wang, Min-Jung, Koenen, Karestan C., Smoller, Jordan W., Wray, Naomi R., Ripke, Stephan, Mattheisen, Manuel, Trzaskowski, Maciej, Byrne, Enda M., Abdellaoui, Abdel, Adams, Mark J., Agerbo, Esben, Air, TracyM., Andlauer, Till F. M., Bacanu, Silviu-Alin, Baekvad-Hansen, Marie, Beekman, Aartjan T. F., Bigdeli, Tim B., Binder, Elisabeth B., Blackwood, Douglas H. R., Bryois, Julien, Buttenschon, Henriette N., Bybjerg-Grauholm, Jonas, Cai, Na, Castelao, Enrique, Hvarregaard, Jane ... Sullivan, Patrick F. (2019). Assessment of bidirectional relationships between physical activity and depression among adults A 2-Sample mendelian randomization study. JAMA Psychiatry, 76 (4), 399-408. doi: 10.1001/jamapsychiatry.2018.4175

Assessment of bidirectional relationships between physical activity and depression among adults A 2-Sample mendelian randomization study