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2023

Journal Article

Dimensionality reduction under scrutiny

Yang, Yang, Tuong, Zewen K. and Yu, Di (2023). Dimensionality reduction under scrutiny. Nature Computational Science, 3 (1), 8-9. doi: 10.1038/s43588-022-00383-1

Dimensionality reduction under scrutiny

2022

Journal Article

Dendritic cell-derived IL-27 p28 regulates T cell program in pathogenicity and alleviates acute graft-versus-host disease

Gong, Huanle, Ma, Shoubao, Chen, Jia, Yang, Bingyu, Liu, Shuangzhu, Liu, Xin, Han, Jingjing, Wu, Xiaojin, Lei, Lei, Yin, Zhinan, Sun, Hongjian, Yu, Di, Liu, Haiyan, Xu, Yang and Wu, Depei (2022). Dendritic cell-derived IL-27 p28 regulates T cell program in pathogenicity and alleviates acute graft-versus-host disease. Signal Transduction and Targeted Therapy, 7 (1) 319, 1-12. doi: 10.1038/s41392-022-01147-z

Dendritic cell-derived IL-27 p28 regulates T cell program in pathogenicity and alleviates acute graft-versus-host disease

2022

Journal Article

LncRNA IL21‐AS1 interacts with hnRNPU protein to promote IL21 overexpression and aberrant differentiation of Tfh cells in systemic lupus erythematosus

Liu, Limin, Hu, Longyuan, Long, Haojun, Zheng, Meiling, Hu, Zhi, He, Ye, Gao, Xiaofei, Du, Pei, Zhao, Hongjun, Yu, Di, Lu, Qianjin and Zhao, Ming (2022). LncRNA IL21‐AS1 interacts with hnRNPU protein to promote IL21 overexpression and aberrant differentiation of Tfh cells in systemic lupus erythematosus. Clinical and Translational Medicine, 12 (12) e1117, 1-21. doi: 10.1002/ctm2.1117

LncRNA IL21‐AS1 interacts with hnRNPU protein to promote IL21 overexpression and aberrant differentiation of Tfh cells in systemic lupus erythematosus

2022

Journal Article

Efficacy and Safety of Low-Dose Interleukin 2 for Primary Sjögren Syndrome: A Randomized Clinical Trial

He, Jing, Chen, Jiali, Miao, Miao, Zhang, Ruijun, Cheng, Gong, Wang, Yifan, Feng, Ruiling, Huang, Bo, Luan, Huijie, Jia, Yuan, Jin, Yuebo, Zhang, Xiaoying, Shao, Miao, Wang, Yu, Zhang, Xia, Li, Jing, Zhao, Xiaozhen, Wang, Han, Liu, Tian, Xiao, Xian, Zhang, Xuewu, Su, Yin, Mu, Rong, Ye, Hua, Li, Ru, Liu, Xu, Liu, Yanying, Li, Chun, Liu, Huixin ... Li, Zhanguo (2022). Efficacy and Safety of Low-Dose Interleukin 2 for Primary Sjögren Syndrome: A Randomized Clinical Trial. JAMA Network Open, 5 (11) e2241451, 1-16. doi: 10.1001/jamanetworkopen.2022.41451

Efficacy and Safety of Low-Dose Interleukin 2 for Primary Sjögren Syndrome: A Randomized Clinical Trial

2022

Journal Article

Inhibition of UBA6 by inosine augments tumour immunogenicity and responses

Zhang, Lei, Jiang, Li, Yu, Liang, Li, Qin, Tian, Xiangjun, He, Jingquan, Zeng, Ling, Yang, Yuqin, Wang, Chaoran, Wei, Yuhan, Jiang, Xiaoyue, Li, Jing, Ge, Xiaolu, Gu, Qisheng, Li, Jikun, Wu, Di, Sadler, Anthony J., Yu, Di, Xu, Dakang, Gao, Yue, Yuan, Xiangliang and He, Baokun (2022). Inhibition of UBA6 by inosine augments tumour immunogenicity and responses. Nature Communications, 13 (1) 5413, 1-16. doi: 10.1038/s41467-022-33116-z

Inhibition of UBA6 by inosine augments tumour immunogenicity and responses

2022

Journal Article

Allergen Immunotherapy Reverses Immune Response to SARS-CoV-2 Vaccine in Patients with Allergic Rhinitis: A Prospective Observational Trial

Yao, Yin, Huang, Ao, Deng, Yi-Ke, Liu, Yan, Zhu, Hong-Yu, Wang, Nan, Wang, Zhe-Zheng, Zhu, Rong-Fei, Yu, Di and Liu, Zheng (2022). Allergen Immunotherapy Reverses Immune Response to SARS-CoV-2 Vaccine in Patients with Allergic Rhinitis: A Prospective Observational Trial. American Journal of Respiratory and Critical Care Medicine, 206 (6), 780-783. doi: 10.1164/rccm.202203-0608le

Allergen Immunotherapy Reverses Immune Response to SARS-CoV-2 Vaccine in Patients with Allergic Rhinitis: A Prospective Observational Trial

2022

Journal Article

Targeting TFH cells in human diseases and vaccination: rationale and practice

Yu, Di, Walker, Lucy S. K., Liu, Zheng, Linterman, Michelle A. and Li, Zhanguo (2022). Targeting TFH cells in human diseases and vaccination: rationale and practice. Nature Immunology, 23 (8), 1157-1168. doi: 10.1038/s41590-022-01253-8

Targeting TFH cells in human diseases and vaccination: rationale and practice

2022

Journal Article

Integrative analysis of small RNA and mRNA expression profiles identifies signatures associated with chronic epididymitis

Gong, Jialei, Wang, Peng, Liu, Jin-Chuan, Li, Jianlin, Zeng, Qun-Xiong, Yang, Chen, Li, Yanfeng, Yu, Di, Cao, Dandan and Duan, Yong-Gang (2022). Integrative analysis of small RNA and mRNA expression profiles identifies signatures associated with chronic epididymitis. Frontiers in Immunology, 13 883803, 1-12. doi: 10.3389/fimmu.2022.883803

Integrative analysis of small RNA and mRNA expression profiles identifies signatures associated with chronic epididymitis

2022

Journal Article

Iron-dependent epigenetic modulation promotes pathogenic T cell differentiation in lupus

Gao, Xiaofei, Song, Yang, Wu, Jiali, Lu, Shuang, Min, Xiaoli, Liu, Limin, Hu, Longyuan, Zheng, Meiling, Du, Pei, Yu, Yaqin, Long, Hai, Wu, Haijing, Jia, Sujie, Yu, Di, Lu, Qianjin and Zhao, Ming (2022). Iron-dependent epigenetic modulation promotes pathogenic T cell differentiation in lupus. Journal of Clinical Investigation, 132 (9) e152345. doi: 10.1172/JCI152345

Iron-dependent epigenetic modulation promotes pathogenic T cell differentiation in lupus

2022

Journal Article

Context-dependent regulation of follicular helper T cell survival

Chen, Zhian, Wang, Naiqi, Yao, Yin and Yu, Di (2022). Context-dependent regulation of follicular helper T cell survival. Trends in Immunology, 43 (4), 309-321. doi: 10.1016/j.it.2022.02.002

Context-dependent regulation of follicular helper T cell survival

2022

Journal Article

Extrafollicular PD-1highCXCR5–CD4+ T cells participate in local immunoglobulin production in nasal polyps

Wang, Zhi-Chao, Yao, Yin, Chen, Cai-Ling, Guo, Cui-Lian, Ding, Hong-Xia, Song, Jia, Wang, Zhe-Zheng, Wang, Nan, Li, Xue-Li, Liao, Bo, Yang, Yang, Yu, Di and Liu, Zheng (2022). Extrafollicular PD-1highCXCR5–CD4+ T cells participate in local immunoglobulin production in nasal polyps. Journal of Allergy and Clinical Immunology, 149 (2), 610-623. doi: 10.1016/j.jaci.2021.06.023

Extrafollicular PD-1highCXCR5–CD4+ T cells participate in local immunoglobulin production in nasal polyps

2022

Journal Article

TFH2 cells associate with enhanced humoral immunity to SARS-CoV-2 inactivated vaccine in patients with allergic rhinitis

Yao, Yin, Wang, Zhe-Zheng, Huang, Ao, Liu, Yan, Wang, Nan, Wang, Zhi-Chao, Yang, Lin, Li, Hui-Jun, Xie, Jun-Gang, Zhu, Rong-Fei, Cheng, Li-Ming, Yu, Di and Liu, Zheng (2022). TFH2 cells associate with enhanced humoral immunity to SARS-CoV-2 inactivated vaccine in patients with allergic rhinitis. Clinical and Translational Medicine, 12 (1) e717, e717. doi: 10.1002/ctm2.717

TFH2 cells associate with enhanced humoral immunity to SARS-CoV-2 inactivated vaccine in patients with allergic rhinitis

2022

Journal Article

Evolution of γ chain cytokines: mechanisms, methods and applications

Antczak, Magdalena, Cañete, Pablo F., Chen, Zhian, Belle, Clémence and Yu, Di (2022). Evolution of γ chain cytokines: mechanisms, methods and applications. Computational and Structural Biotechnology Journal, 20, 4746-4755. doi: 10.1016/j.csbj.2022.08.050

Evolution of γ chain cytokines: mechanisms, methods and applications

2022

Journal Article

Longevity of vaccine protection: immunological mechanism, assessment methods, and improving strategy

Chen, Zhian, Gao, Xin and Yu, Di (2022). Longevity of vaccine protection: immunological mechanism, assessment methods, and improving strategy. View, 3 (1) 20200103, 20200103. doi: 10.1002/viw.20200103

Longevity of vaccine protection: immunological mechanism, assessment methods, and improving strategy

2022

Book Chapter

Therapeutic modulation of T follicular helper cells by low-dose IL-2 treatment

Chen, Zhian, Liang, Kaili, Deng, Jun and Yu, Di (2022). Therapeutic modulation of T follicular helper cells by low-dose IL-2 treatment. T-follicular helper cells: methods and protocols. (pp. 255-265) New York, NY, United States: Humana Press. doi: 10.1007/978-1-0716-1736-6_21

Therapeutic modulation of T follicular helper cells by low-dose IL-2 treatment

2021

Journal Article

Flow cytometric analysis of T lymphocytes and cytokines in aqueous humor of patients with varicella zoster virus-mediated acute retinal necrosis

Kang, Hao, Wei, Yunbo, Liu, Ming, Yu, Di and Tao, Yong (2021). Flow cytometric analysis of T lymphocytes and cytokines in aqueous humor of patients with varicella zoster virus-mediated acute retinal necrosis. BMC Ophthalmology, 21 (1) 193. doi: 10.1186/s12886-021-01951-1

Flow cytometric analysis of T lymphocytes and cytokines in aqueous humor of patients with varicella zoster virus-mediated acute retinal necrosis

2021

Journal Article

Macrophage-tumor chimeric exosomes accumulate in lymph node and tumor to activate the immune response and the tumor microenvironment

Wang, Shuang, Li, Feng, Ye, Tong, Wang, Jianghua, Lyu, Chengliang, Qing, Shuang, Ding, Zhaowen, Gao, Xiaoyong, Jia, Rongrong, Yu, Di, Ren, Jun, Wei, Wei and Ma, Guanghui (2021). Macrophage-tumor chimeric exosomes accumulate in lymph node and tumor to activate the immune response and the tumor microenvironment. Science Translational Medicine, 13 (615) eabb6981, eabb6981. doi: 10.1126/scitranslmed.abb6981

Macrophage-tumor chimeric exosomes accumulate in lymph node and tumor to activate the immune response and the tumor microenvironment

2021

Journal Article

Long-term outcomes in children undergoing vascular ring division: a multi-institution experience

Yu, Di, Guo, Zhangke, You, Xin, Peng, Wei, Qi, Jirong, Sun, Jian, Wu, Kaihong, Li, Xiaofeng and Mo, Xuming (2021). Long-term outcomes in children undergoing vascular ring division: a multi-institution experience. European Journal of Cardio-Thoracic Surgery, 61 (3), 605-613. doi: 10.1093/ejcts/ezab432

Long-term outcomes in children undergoing vascular ring division: a multi-institution experience

2021

Journal Article

Understand SLE heterogeneity in the era of omics, big data, and artificial intelligence

Puri, Prianka, Jiang, Simon H., Yang, Yang, Mackay, Fabienne and Yu, Di (2021). Understand SLE heterogeneity in the era of omics, big data, and artificial intelligence. Rheumatology and Autoimmunity, 1 (1), 38-49. doi: 10.1002/rai2.12010

Understand SLE heterogeneity in the era of omics, big data, and artificial intelligence

2021

Journal Article

Low-dose IL-2 therapy invigorates CD8+ T cells for viral control in systemic lupus erythematosus with a potential risk of deteriorating immunopathology

Zhou, Pengcheng, Chen, Jiali, He, Jing, Zheng, Ting, Yunis, Joseph, Makota, Victor, Alexandre, Yannick O., Gong, Fang, Zhang, Xia, Xie, Wuxiang, Li, Yuhui, Shao, Miao, Zhu, Yanshan, Sinclair, Jane E., Miao, Miao, Chen, Yaping, Short, Kirsty R., Mueller, Scott N., Sun, Xiaolin, Yu, Di and Li, Zhanguo (2021). Low-dose IL-2 therapy invigorates CD8+ T cells for viral control in systemic lupus erythematosus with a potential risk of deteriorating immunopathology. PLoS Pathogens, 17 (10) e1009858, e1009858. doi: 10.1371/journal.ppat.1009858

Low-dose IL-2 therapy invigorates CD8+ T cells for viral control in systemic lupus erythematosus with a potential risk of deteriorating immunopathology