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2023

Conference Publication

Structural basis of an anti-cancer biological warhead bound to its target CDCP1 for the diagnosis and treatment of epithelial cancers

Kwah, Kayden, Gu, Weixi, Arachchige, Kasun S. A., He, Yaowu, Landsberg, Michael, Kobe, Bostjan and Hooper, John (2023). Structural basis of an anti-cancer biological warhead bound to its target CDCP1 for the diagnosis and treatment of epithelial cancers. XXVI IUCr Congress, Melbourne, VIC Australia, 22-29 August 2023. Hoboken, NJ United States: Wiley-Blackwell. doi: 10.1107/s2053273323084449

Structural basis of an anti-cancer biological warhead bound to its target CDCP1 for the diagnosis and treatment of epithelial cancers

2023

Conference Publication

Structural and functional characterisation of plant TIR domains and their role in plant innate immunity

Lim, Bryan Y. J., Sorbello, Mitchell, Ngu, Dalton H. Y., Burdett, Hayden, Maruta, Natsumi and Kobe, Boštjan (2023). Structural and functional characterisation of plant TIR domains and their role in plant innate immunity. XXVI IUCr Congress, Melbourne, VIC Australia, 22-29 August 2023. Hoboken, NJ United States: Wiley-Blackwell. doi: 10.1107/s2053273323087752

Structural and functional characterisation of plant TIR domains and their role in plant innate immunity

2023

Conference Publication

Development of 3D-ED/MicroED facility at the University of Queensland

Arachchige, K. S. A., Koifman, N., Gu, W., Kobe, B., Clegg, J. K., Xu, H. and Wepf, R. (2023). Development of 3D-ED/MicroED facility at the University of Queensland. XXVI IUCr Congress, Melbourne, VIC Australia, 22-29 August 2023. Hoboken, NJ United States: Wiley-Blackwell. doi: 10.1107/s2053273323086461

Development of 3D-ED/MicroED facility at the University of Queensland

2023

Conference Publication

Structural and functional analysis of the TIR-domain in Toll-like receptors 7, 8 and 9 signaling and the interactions with adaptor proteins

Qian, Xiaoqi, Nanson, Jeffrey and Kobe, Boštjan (2023). Structural and functional analysis of the TIR-domain in Toll-like receptors 7, 8 and 9 signaling and the interactions with adaptor proteins. XXVI IUCr Congress, Melbourne, VIC Australia, 22-29 August 2023. Hoboken, NJ United States: Wiley-Blackwell. doi: 10.1107/s205327332308662x

Structural and functional analysis of the TIR-domain in Toll-like receptors 7, 8 and 9 signaling and the interactions with adaptor proteins

2023

Conference Publication

Activated bacterial TIR proteins: NADase activity and filamentous assemblies

Li, Sulin, Manik, Mohammad Kawsar, Ve, Thomas, Nanson, Jeffrey D. and Kobe, Bostjan (2023). Activated bacterial TIR proteins: NADase activity and filamentous assemblies. XXVI IUCr Congress, Melbourne, VIC Australia, 22-29 August 2023. Hoboken, NJ United States: Wiley-Blackwell. doi: 10.1107/s2053273323086904

Activated bacterial TIR proteins: NADase activity and filamentous assemblies

2023

Conference Publication

Structural basis for activation and inhibition of the pro-neurodegenerative NADase SARM1

Shi, Y., Nanson, J., Gu, W., Masic, V., Mosaiab, T., Landsberg, M., Kobe, B. and Ve, T. (2023). Structural basis for activation and inhibition of the pro-neurodegenerative NADase SARM1. XXVI IUCr Congress, Melbourne, VIC Australia, 22-29 August 2023. Hoboken, NJ United States: Wiley-Blackwell. doi: 10.1107/s2053273323087776

Structural basis for activation and inhibition of the pro-neurodegenerative NADase SARM1

2023

Journal Article

Toll/interleukin-1 receptor domains in bacterial and plant immunity

Li, Sulin, Manik, Mohammad K., Shi, Yun, Kobe, Bostjan and Ve, Thomas (2023). Toll/interleukin-1 receptor domains in bacterial and plant immunity. Current Opinion in Microbiology, 74 102316, 1-10. doi: 10.1016/j.mib.2023.102316

Toll/interleukin-1 receptor domains in bacterial and plant immunity

2023

Journal Article

A rust‐fungus Nudix hydrolase effector decaps mRNA in vitro and interferes with plant immune pathways

McCombe, Carl L., Catanzariti, Ann‐Maree, Greenwood, Julian R., Desai, Anna M., Outram, Megan A., Yu, Daniel S., Ericsson, Daniel J., Brenner, Steven E., Dodds, Peter N., Kobe, Bostjan, Jones, David A. and Williams, Simon J. (2023). A rust‐fungus Nudix hydrolase effector decaps mRNA in vitro and interferes with plant immune pathways. New Phytologist, 239 (1), 222-239. doi: 10.1111/nph.18727

A rust‐fungus Nudix hydrolase effector decaps mRNA in vitro and interferes with plant immune pathways

2023

Journal Article

TIR domain-associated nucleotides with functions in plant immunity and beyond

Maruta, Natsumi, Sorbello, Mitchell, Lim, Bryan Y. J., McGuinness, Helen Y., Shi, Yun, Ve, Thomas and Kobe, Bostjan (2023). TIR domain-associated nucleotides with functions in plant immunity and beyond. Current Opinion in Plant Biology, 73 102364, 1-11. doi: 10.1016/j.pbi.2023.102364

TIR domain-associated nucleotides with functions in plant immunity and beyond

2023

Journal Article

Discovery of C-5 pyrazole-substituted pyrrolopyridine derivatives as potent and selective inhibitors for janus kinase 1

Lang, Jia-Jia, Lv, You, Kobe, Bostjan, Chen, Hongfei, Tan, Yan, Chen, Limei, Wang, Xuechuan, Mi, Pengbing, Zheng, Xing and Lin, Ying-Wu (2023). Discovery of C-5 pyrazole-substituted pyrrolopyridine derivatives as potent and selective inhibitors for janus kinase 1. Journal of Medicinal Chemistry, 66 (10), 6725-6742. doi: 10.1021/acs.jmedchem.3c00050

Discovery of C-5 pyrazole-substituted pyrrolopyridine derivatives as potent and selective inhibitors for janus kinase 1

2023

Journal Article

Exon shuffling potentiates a diverse repertoire of brown algal NB‐ARC‐TPR candidate immune receptor proteins via alternative splicing

Teng, Linhong, Liang, Miao, Wang, Chenghui, Li, Yan, Urbach, Jonathan M., Kobe, Bostjan, Xing, Qikun, Han, Wentao and Ye, Naihao (2023). Exon shuffling potentiates a diverse repertoire of brown algal NB‐ARC‐TPR candidate immune receptor proteins via alternative splicing. The Plant Journal, 114 (2), 246-261. doi: 10.1111/tpj.16131

Exon shuffling potentiates a diverse repertoire of brown algal NB‐ARC‐TPR candidate immune receptor proteins via alternative splicing

2023

Journal Article

Capsaicin receptor TRPV1 maintains quiescence of hepatic stellate cells in the liver via recruitment of SARM1

Tao, Le, Yang, Guangyue, Sun, Tiantian, Tao, Jie, Zhu, Chan, Yu, Huimin, Cheng, Yalan, Yang, Zongguo, Xu, Mingyi, Jiang, Yuefeng, Zhang, Wei, Wang, Zhiyi, Ma, Wenting, Wu, Liu, Xue, Dongying, Wang, Dongxue, Yang, Wentao, Zhao, Yongjuan, Horsefield, Shane, Kobe, Bostjan, Zhang, Zhe, Tang, Zongxiang, Li, Qigen, Zhai, Qiwei, Dooley, Steven, Seki, Ekihiro, Liu, Ping, Xu, Jianrong, Chen, Hongzhuan and Liu, Cheng (2023). Capsaicin receptor TRPV1 maintains quiescence of hepatic stellate cells in the liver via recruitment of SARM1. Journal of Hepatology, 78 (4), 805-819. doi: 10.1016/j.jhep.2022.12.031

Capsaicin receptor TRPV1 maintains quiescence of hepatic stellate cells in the liver via recruitment of SARM1

2023

Journal Article

Plant and prokaryotic TIR domains generate distinct cyclic ADPR NADase products

Bayless, Adam M., Chen, Sisi, Ogden, Sam C., Xu, Xiaoyan, Sidda, John D., Manik, Mohammad K., Li, Sulin, Kobe, Bostjan, Ve, Thomas, Song, Lijiang, Grant, Murray, Wan, Li and Nishimura, Marc T. (2023). Plant and prokaryotic TIR domains generate distinct cyclic ADPR NADase products. Science Advances, 9 (11) eade8487, 1-15. doi: 10.1126/sciadv.ade8487

Plant and prokaryotic TIR domains generate distinct cyclic ADPR NADase products

2022

Journal Article

Flow cytometric reporter assays provide robust functional analysis of signaling complexes

Muusse, Timothy W., Lee, Morris Y.L., Kim, Hyoyoung, Parat, Marie-Odile, Nanson, Jeffrey D., Kobe, Bostjan, Vajjhala, Parimala R. and Stacey, Katryn J. (2022). Flow cytometric reporter assays provide robust functional analysis of signaling complexes. Journal of Biological Chemistry, 298 (12) 102666, 102666. doi: 10.1016/j.jbc.2022.102666

Flow cytometric reporter assays provide robust functional analysis of signaling complexes

2022

Journal Article

Engineering indel and substitution variants of diverse and ancient enzymes using Graphical Representation of Ancestral Sequence Predictions (GRASP)

Foley, Gabriel, Mora, Ariane, Ross, Connie M., Bottoms, Scott, Sützl, Leander, Lamprecht, Marnie L., Zaugg, Julian, Essebier, Alexandra, Balderson, Brad, Newell, Rhys, Thomson, Raine E. S., Kobe, Bostjan, Barnard, Ross T., Guddat, Luke, Schenk, Gerhard, Carsten, Jörg, Gumulya, Yosephine, Rost, Burkhard, Haltrich, Dietmar, Sieber, Volker, Gillam, Elizabeth M. J. and Bodén, Mikael (2022). Engineering indel and substitution variants of diverse and ancient enzymes using Graphical Representation of Ancestral Sequence Predictions (GRASP). PL o S Computational Biology, 18 (10) e1010633, e1010633. doi: 10.1371/journal.pcbi.1010633

Engineering indel and substitution variants of diverse and ancient enzymes using Graphical Representation of Ancestral Sequence Predictions (GRASP)

2022

Journal Article

AICAR transformylase/IMP cyclohydrolase (ATIC) is essential for de novo purine biosynthesis and infection by Cryptococcus neoformans

Wizrah, Maha S. I., Chua, Sheena M. H., Luo, Zhenyao, Manik, Mohammad K., Pan, Mengqi, Whyte, Jessica M. L., Robertson, Avril A. B., Kappler, Ulrike, Kobe, Bostjan and Fraser, James A. (2022). AICAR transformylase/IMP cyclohydrolase (ATIC) is essential for de novo purine biosynthesis and infection by Cryptococcus neoformans. Journal of Biological Chemistry, 298 (10) 102453, 102453. doi: 10.1016/j.jbc.2022.102453

AICAR transformylase/IMP cyclohydrolase (ATIC) is essential for de novo purine biosynthesis and infection by Cryptococcus neoformans

2022

Journal Article

Cyclic ADP ribose isomers: Production, chemical structures, and immune signaling

Manik, Mohammad K., Shi, Yun, Li, Sulin, Zaydman, Mark A., Damaraju, Neha, Eastman, Samuel, Smith, Thomas G., Gu, Weixi, Masic, Veronika, Mosaiab, Tamim, Weagley, James S., Hancock, Steven J., Vasquez, Eduardo, Hartley-Tassell, Lauren, Kargios, Nestoras, Maruta, Natsumi, Lim, Bryan Y. J., Burdett, Hayden, Landsberg, Michael J., Schembri, Mark A., Prokes, Ivan, Song, Lijiang, Grant, Murray, DiAntonio, Aaron, Nanson, Jeffrey D., Guo, Ming, Milbrandt, Jeffrey, Ve, Thomas and Kobe, Bostjan (2022). Cyclic ADP ribose isomers: Production, chemical structures, and immune signaling. Science, 377 (6614) eadc8969, 1-11. doi: 10.1126/science.adc8969

Cyclic ADP ribose isomers: Production, chemical structures, and immune signaling

2022

Conference Publication

Structural basis of TIR-domain assembly formation in TRAM- and TRIF- dependent TLR signalling

Pan, M., Hedger, A., Nanson, J., Pospich, S., Ve, T. V. E. A., Raunser, S., Landsberg, M. and Kobe, B. (2022). Structural basis of TIR-domain assembly formation in TRAM- and TRIF- dependent TLR signalling. 2022 American Crystallographic Association Meeting, Portland, OR USA, 29 July-3 August 2022. Hoboken, NJ USA: Wiley-Blackwell Publishing. doi: 10.1107/s2053273322093196

Structural basis of TIR-domain assembly formation in TRAM- and TRIF- dependent TLR signalling

2022

Journal Article

Megahertz pulse trains enable multi-hit serial femtosecond crystallography experiments at X-ray free electron lasers

Holmes, Susannah, Kirkwood, Henry J., Bean, Richard, Giewekemeyer, Klaus, Martin, Andrew V., Hadian-Jazi, Marjan, Wiedorn, Max O., Oberthür, Dominik, Marman, Hugh, Adriano, Luigi, Al-Qudami, Nasser, Bajt, Saša, Barák, Imrich, Bari, Sadia, Bielecki, Johan, Brockhauser, Sandor, Coleman, Mathew A., Cruz-Mazo, Francisco, Danilevski, Cyril, Dörner, Katerina, Gañán-Calvo, Alfonso M., Graceffa, Rita, Fanghor, Hans, Heymann, Michael, Frank, Matthias, Kaukher, Alexander, Kim, Yoonhee, Kobe, Bostjan, Knoška, Juraj ... Darmanin, Connie (2022). Megahertz pulse trains enable multi-hit serial femtosecond crystallography experiments at X-ray free electron lasers. Nature Communications, 13 (1) 4708, 1-13. doi: 10.1038/s41467-022-32434-6

Megahertz pulse trains enable multi-hit serial femtosecond crystallography experiments at X-ray free electron lasers

2022

Journal Article

Enhancing the Thermal and Kinetic Stability of Ketol-Acid Reductoisomerase, a Central Catalyst of a Cell-Free Enzyme Cascade for the Manufacture of Platform Chemicals

Lv, You, Zheng, Shan, Goldenzweig, Adi, Liu, Fengjiang, Gao, Yan, Yang, Xiuna, Kandale, Ajit, McGeary, Ross P., Williams, Simon, Kobe, Bostjan, Schembri, Mark A., Landsberg, Michael J., Wu, Bin, Brück, Thomas B., Sieber, Volker, Boden, Mikael, Rao, Zihe, Fleishman, Sarel J., Schenk, Gerhard and Guddat, Luke W. (2022). Enhancing the Thermal and Kinetic Stability of Ketol-Acid Reductoisomerase, a Central Catalyst of a Cell-Free Enzyme Cascade for the Manufacture of Platform Chemicals. Applied Biosciences, 1 (2), 163-178. doi: 10.3390/applbiosci1020011

Enhancing the Thermal and Kinetic Stability of Ketol-Acid Reductoisomerase, a Central Catalyst of a Cell-Free Enzyme Cascade for the Manufacture of Platform Chemicals