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2019

Journal Article

Malnutrition and quality of life among adult inflammatory bowel disease patients

Pulley, Jessica, Todd, Alwyn, Flatley, Christopher and Begun, Jakob (2019). Malnutrition and quality of life among adult inflammatory bowel disease patients. JGH Open, 4 (3), 454-460. doi: 10.1002/jgh3.12278

Malnutrition and quality of life among adult inflammatory bowel disease patients

2019

Journal Article

Faecal calprotectin testing for identifying patients with organic gastrointestinal disease: systematic review and meta‐analysis

An, Yoon‐Kyo, Prince, David, Gardiner, Fergus, Neeman, Teresa, Linedale, Ecushla C., Andrews, Jane M., Connor, Susan and Begun, Jakob (2019). Faecal calprotectin testing for identifying patients with organic gastrointestinal disease: systematic review and meta‐analysis. Medical Journal of Australia, 211 (10) mja2.50384, 461-467. doi: 10.5694/mja2.50384

Faecal calprotectin testing for identifying patients with organic gastrointestinal disease: systematic review and meta‐analysis

2019

Journal Article

Gastrointestinal ultrasound in inflammatory bowel disease care: patient perceptions and impact on disease‐related knowledge

Rajagopalan, Arvind, Sathananthan, Dharshan, An, Yoon‐Kyo, Van De Ven, Lucinda, Martin, Serena, Fon, James, Costello, Samuel P, Begun, Jakob and Bryant, Robert V (2019). Gastrointestinal ultrasound in inflammatory bowel disease care: patient perceptions and impact on disease‐related knowledge. JGH Open, 4 (2) jgh3.12268, 267-272. doi: 10.1002/jgh3.12268

Gastrointestinal ultrasound in inflammatory bowel disease care: patient perceptions and impact on disease‐related knowledge

2019

Journal Article

Distinct tissue-specific roles for the disease-associated autophagy genes ATG16L2 and ATG16L1

Khor, Bernard, Conway, Kara L., Omar, Abdifatah S., Biton, Moshe, Haber, Adam L., Rogel, Noga, Baxt, Leigh A., Begun, Jakob, Kuballa, Petric, Gagnon, John D., Lassen, Kara G., Regev, Aviv and Xavier, Ramnik J. (2019). Distinct tissue-specific roles for the disease-associated autophagy genes ATG16L2 and ATG16L1. The Journal of Immunology, 203 (7), ji1800419-1829. doi: 10.4049/jimmunol.1800419

Distinct tissue-specific roles for the disease-associated autophagy genes ATG16L2 and ATG16L1

2019

Journal Article

MUC13 promotes the development of colitis-associated colorectal tumors via β-catenin activity

Sheng, Yong Hua, Wong, Kuan Yau, Seim, Inge, Wang, Ran, He, Yaowu, Wu, Andy, Patrick, Maya, Lourie, Rohan, Schreiber, Veronika, Giri, Rabina, Ng, Choa Ping, Popat, Amirali, Hooper, John, Kijanka, Gregor, Florin, Timothy H., Begun, Jakob, Radford, Kristen J., Hasnain, Sumaira and McGuckin, Michael A. (2019). MUC13 promotes the development of colitis-associated colorectal tumors via β-catenin activity. Oncogene, 38 (48), 7294-7310. doi: 10.1038/s41388-019-0951-y

MUC13 promotes the development of colitis-associated colorectal tumors via β-catenin activity

2019

Journal Article

Mindfulness based cognitive therapy experiences in youth with inflammatory bowel disease and depression: protocol for a mixed methods qualitative study

Ewais, Tatjana, Begun, Jake, Kenny, Maura, Headey, Alan and Kisely, Steve (2019). Mindfulness based cognitive therapy experiences in youth with inflammatory bowel disease and depression: protocol for a mixed methods qualitative study. JMIR Research Protocols, 8 (7) e14432, e14432. doi: 10.2196/14432

Mindfulness based cognitive therapy experiences in youth with inflammatory bowel disease and depression: protocol for a mixed methods qualitative study

2019

Conference Publication

Immune responses to the microbiome tune MHC class II antigen presentation by the intestinal epithelium to control gut pathology

Koyama, Motoko, Mukhopadhyay, Pamela, Schuster, Iona S., Henden, Andrea S., Hülsdünker, Jan, Varelias, Antiopi, Vetizou, Marie, Kuns, Rachel D., Robb, Renee J., Zhang, Ping, Blazar, Bruce R., Thomas, Ranjeny, Begun, Jakob, Waddell, Nicola, Trinchieri, Giorgio, Zeiser, Robert, Clouston, Andrew D., Degli-Esposti, Mariapia A. and Hill, Geoffrey R. (2019). Immune responses to the microbiome tune MHC class II antigen presentation by the intestinal epithelium to control gut pathology. Immunology 2019™ Meeting, San Diego, CA United States, 9-13 May 2019. Rockville, MD United States: American Association of Immunologists. doi: 10.4049/jimmunol.202.supp.69.38

Immune responses to the microbiome tune MHC class II antigen presentation by the intestinal epithelium to control gut pathology

2019

Journal Article

Clinical decision support improves quality of care in patients with ulcerative colitis

Jackson, Belinda, Begun, Jake, Gray, Kathleen, Churilov, Leonid, Liew, Danny, Knowles, Simon and De Cruz, Peter (2019). Clinical decision support improves quality of care in patients with ulcerative colitis. Alimentary Pharmacology and Therapeutics, 49 (8), 1040-1051. doi: 10.1111/apt.15209

Clinical decision support improves quality of care in patients with ulcerative colitis

2019

Journal Article

Protocol for a pilot randomised controlled trial of mindfulness-based cognitive therapy in youth with inflammatory bowel disease and depression

Ewais, Tatjana, Begun, Jake, Kenny, Maura, Chuang, Kai-Hsiang, Barclay, Johanna, Hay, Karen and Kisely, Steve (2019). Protocol for a pilot randomised controlled trial of mindfulness-based cognitive therapy in youth with inflammatory bowel disease and depression. BMJ Open, 9 (4) e025568, e025568. doi: 10.1136/bmjopen-2018-025568

Protocol for a pilot randomised controlled trial of mindfulness-based cognitive therapy in youth with inflammatory bowel disease and depression

2019

Journal Article

Interleukin-22: friend or foe?

Hasnain, Sumaira Z. and Begun, Jakob (2019). Interleukin-22: friend or foe?. Immunology and Cell Biology, 97 (4), 355-357. doi: 10.1111/imcb.12249

Interleukin-22: friend or foe?

2019

Conference Publication

Endoscopic balloon dilatation is safe and has a high success rate in patients with stricturing Crohn's disease

Lim, E., Thai, M., Hendy, P., Alchlaihawi, M., Leong, R., Connor, S., Ng, W., Gu, B., van Langenberg, D., Thin, L., Schulberg, J., Kamm, M., Gilmore, R., Taylor, K., Sallis, O., Andrews, J., Daker, C., Barclay, M., Wark, G., Ghaly, S., Begun, M., Krishnaprasad, K. and Begun, J. (2019). Endoscopic balloon dilatation is safe and has a high success rate in patients with stricturing Crohn's disease. 14th Congress of ECCO, Copenhagen, Denmark, 6-9 March 2019. Oxford, United Kingdom: Oxford University Press. doi: 10.1093/ecco-jcc/jjy222.647

Endoscopic balloon dilatation is safe and has a high success rate in patients with stricturing Crohn's disease

2019

Journal Article

A systematic review and meta-analysis of mindfulness based interventions and yoga in inflammatory bowel disease

Ewais, Tatjana, Begun, Jake, Kenny, Maura, Rickett, Kirsty, Hay, Karen, Ajilchi, Bita and Kisely, Steve (2019). A systematic review and meta-analysis of mindfulness based interventions and yoga in inflammatory bowel disease. Journal of Psychosomatic Research, 116, 44-53. doi: 10.1016/j.jpsychores.2018.11.010

A systematic review and meta-analysis of mindfulness based interventions and yoga in inflammatory bowel disease

2019

Conference Publication

Effectiveness of fecal calprotectin testing to identify patients with organic gastrointestinal diseases: a systematic review and diagnostic meta-analysis

An, Y., Prince, D., Gardiner, F., Linedale, E., Andrews, J., Connor, S. and Begun, J. (2019). Effectiveness of fecal calprotectin testing to identify patients with organic gastrointestinal diseases: a systematic review and diagnostic meta-analysis. Gastroenterological Society of Australia (GESA) Australian Gastroenterology Week (AGW) “The Universe Within”, Adelaide, South Australia, 8-10 September 2019. Richmond, VIC, Australia: Wiley-Blackwell Publishing Asia. doi: 10.1111/jgh.14803

Effectiveness of fecal calprotectin testing to identify patients with organic gastrointestinal diseases: a systematic review and diagnostic meta-analysis

2019

Conference Publication

On the role of inflammation in acute paracetamol injury

Alabbas, Saleh, Movva, Ramya, Begun, Jakob, Florin, Timothy and Oancea, Iulia (2019). On the role of inflammation in acute paracetamol injury. International Liver Congress, Vienna Austria, 10-14 April 2019. Amsterdam, Netherlands: Elsevier. doi: 10.1016/S0618-8278(19)30823-0

On the role of inflammation in acute paracetamol injury

2019

Conference Publication

Switching Australian patients with moderate to severe inflammatory bowel disease from originator infliximab to biosimilar Inflectra: Interim results from a multicenter parallel cohort study

Haifer, C., Srinivasan, A., Menon, S., An, Y., Picardo, S., Van Langenberg, D., Begun, J., Ghaly, S. and Thin, L. (2019). Switching Australian patients with moderate to severe inflammatory bowel disease from originator infliximab to biosimilar Inflectra: Interim results from a multicenter parallel cohort study. Gastroenterological Society of Australia (GESA) Australian Gastroenterology Week (AGW) “The Universe Within”, Adelaide, SA, Australia, 8–10 September 2019. Richmond, VIC, Australia: Wiley-Blackwell Publishing Asia. doi: 10.1111/jgh.14801

Switching Australian patients with moderate to severe inflammatory bowel disease from originator infliximab to biosimilar Inflectra: Interim results from a multicenter parallel cohort study

2019

Conference Publication

Investigating the role of bioactives produced by gut bacteria to modulate immune response in inflammatory bowel disease

Giri, R., Cuiv, P. O. and Begun, J. (2019). Investigating the role of bioactives produced by gut bacteria to modulate immune response in inflammatory bowel disease. Gastroenterological Society of Australia (GESA) Australian Gastroenterology Week (AGW) “The Universe Within”, Adelaide, Australia, 8-10 September 2019. Hoboken, NJ, United States: Wiley-Blackwell. doi: 10.1111/jgh.14800

Investigating the role of bioactives produced by gut bacteria to modulate immune response in inflammatory bowel disease

2018

Journal Article

Letter: vedolizumab drug concentrations in neonates following intrauterine exposure

Flanagan, Emma, Gibson, Peter R., Begun, Jakob, Ghaly, Simon, Garg, Mayur, Andrews, Jane M., Rosella, Ourania, Rosella, Gennaro and Bell, Sally J. (2018). Letter: vedolizumab drug concentrations in neonates following intrauterine exposure. Alimentary Pharmacology and Therapeutics, 48 (11-12), 1328-1330. doi: 10.1111/apt.15027

Letter: vedolizumab drug concentrations in neonates following intrauterine exposure

2018

Conference Publication

Predictors in inflammatory bowel disease: Looking into the magic ball: session one summary

Begun, Jakob (2018). Predictors in inflammatory bowel disease: Looking into the magic ball: session one summary. The Takeda Symposium, Melbourne, VIC Australia, 17 – 18 March 2018. Richmond, VIC Australia: Wiley-Blackwell. doi: 10.1111/jgh.14415

Predictors in inflammatory bowel disease: Looking into the magic ball: session one summary

2018

Conference Publication

Enteric microbiota shape the inflammatory response in mice with a Muc2 misfolding mutation

Wang, R., Giri, R., Moniruzzaman, M., Tong, H., Wong, K. Y., Begun, J., McGuckin, M. A. and Hasnain, S. Z. (2018). Enteric microbiota shape the inflammatory response in mice with a Muc2 misfolding mutation. Gastroenterological Society of Australia (GESA) Australian Gastroenterology Week (AGW) “Gut Matters”, Brisbane, QLD, Australia, 8-10 September 2018. Richmond, VIC, Australia: John Wiley & Sons.

Enteric microbiota shape the inflammatory response in mice with a Muc2 misfolding mutation

2018

Journal Article

Personalizing inflammatory bowel disease treatment symposium: Foreward

Begun, Jakob (2018). Personalizing inflammatory bowel disease treatment symposium: Foreward. Journal of Gastroenterology and Hepatology, 33 (S3), 3-3. doi: 10.1111/jgh.14414

Personalizing inflammatory bowel disease treatment symposium: Foreward