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I undertake multi-disciplinary collaborative research developing mathematical, computational and visualisation approaches and techniques that facilitate the research and education in animal and plant systems.

My major research theme is development of mathematical, computer graphics and simulation approaches and techniques that facilitate the study of genetics, physiology, morphogenesis and ecology at the scale of cells, individual plants and insects and their components. These developments in computational biology are being used to increase our understanding of the dynamics of morphogenesis, and as a tool in applied research and education.

Centre for Solar Biotechnology: Prof Ben Hankamer is the founding director of the Solar Biofuels Consortium (2007) and Centre for Solar Biotechnology (2016) which is focused on developing next generation microalgae systems. These systems are designed to tap into the huge energy resource of the sun (>2300x global energy demand) and capture CO2 to produce a wide-range of products. These include solar fuels (e.g. H2 from water, oil, methane and ethanol), foods (e.g. health foods) and high value products (e.g. vaccines produced in algae). Microalgae systems also support important eco-services such as water purification and CO2 sequestration. The Centre is being launched in 2016/2017 and includes approximately 30 teams with skills ranging from genome sequencing through to demonstration systems optimsation and accompanying techno-economis and life cycle analysis. The Centre teams have worked extensively with industry.

Structural Biology: The photosynthetic machinery is the biological interface of microalgae that taps into the huge energy resource of the sun, powers the biosphere and produces the atmospheric oxygen that supports life on Earth. My team uses high resolution single particle analysis and electron tomography to solve the intricate 3D architecture of the photosynthetic machinery to enable structure guided design of high efficiency microalgae cell lines and advanced artificial solar fuel systems.

Dr April Hastwell is a plant molecular biologist with the School of Agriculture and Food Science at The University of Queensland, Australia. The focus of her research group is on roles of short signalling peptides in root development including in molecular networks controlling the beneficial legume-rhizobia symbiosis and nodule development.

Professor Longbin Huang is a Full Professor and leader of an interdisciplinary research group in Ecological Engineering in Mining. His research focuses on mine waste rehabilitation, ecological engineering, and geomicrobial soil formation, integrating ecological, microbiological, and environmental processes to address sustainability challenges in the mining sector, with influence spanning industry, academia, and policy. Professor Huang leads cutting-edge research in: Geo-microbial ecology, Mineral bioweathering, Microbially and rhizosphere driven soil formation from Tailings Minerals.

Professor Huang's work has advanced nature-based solutions for transforming mine tailings, waste rock, and bauxite residues into sustainable ecosystems. Supported by approximately AUD $23 million in competitive and industry-funded research over the past 15 years, his team has developed and demonstrated innovative rehabilitation technologies with field-scale applications. These include a pioneering technology for the treatment and dealkalization of bauxite residues, which has been commercialized through the University of Queensland startup Bioculum Pty Ltd, and novel approaches for preventing acid mine drainage generation in mine waste materials.

Professor Huang has published over 190 scholarly outputs, including journal articles, conference papers, patents, and book chapters. His research has attracted broad international recognition and has contributed significantly to the advancement of mine waste management, ecological restoration, and sustainable mining practices worldwide.

He is highly experienced in industry-partnered research and translation of knowledge into field-based technologies for tackling large environmental challenges in the mining industry, for example, technologies for tackling global tailings problem. Since 2010, he has led many large and industry-partnered research projects attracting about $23M funding. The research aims to deliver transformative knowledge and practices (i.e., technologies/methdologies) in the rehabilitation of mine wastes (e.g., tailings, mineral residues, spoils, waste rocks) and mined landscapes for non-polluting and ecologically and financially sustainable outcomes. Prof Huang has successfully demonstrated innovative methodology and technology to achieve nature-based outcomes in treating and rehabilitating tailings and waste rocks. Prof Huang’s research program was featured in Rio Tinto’s media releases as one of the four most successful global R&D partnerships in 2024. Prof Huang led the development of the first field-feasible technology to treat and dealkalize alkaline bauxite residues for sustainable rehabilitation. His industry-partnered research was recognised in 2019 UQ’s Partners in Research Excellence Award (Resilient Environments) (Rio Tinto and QAL). Prof Huang is also developing new knowledge and technologies for achieving non-polluting and ecologically sustainable rehabilitation of, for example, coal mine spoils and tailings, Fe-ore tailings, bauxite tailings (from mining bauxite), and Cu/Pb-Zn tailings.

Membership of Board, Committee and Society

Professional associations and societies

2010 – Present Australian Soil Science Society.

2023 – Present AuSIMM

2015 – 2025 Present American Society of Mining and Reclamation (ASMR)

Editorial boards/services

2025 - present: Member of Editorial Board, Energy & Environment Nexus

2022 – present: Associate editor (Soil), Reclamation Sciences

Awards & Patent

2019 UQ’s Partners in Research Excellence Award (Resilient Environments) (Rio Tinto and QAL)

2017 SMI-Industry Engagement Award, University of Queensland

2015 SMI-Inaugural Bright Research Ideas Forum Award, University of Queensland

2014 SMI-RHD Supervision Award, University of Queensland

2015 Foliar fertilizer US 20150266786. In. (Google Patents). Huang L, Nguyen AV, Rudolph V, Xu G (equal contribution)

Dr Mark Jackson is a senior researcher at the Queensland Alliance for Agriculture and Food Innovation (QAAFI), where his research focuses on developing innovative approaches to sustainable crop protection. His early postdoctoral studies at the Institute for Molecular Biosciences (IMB-UQ) were split between the development of plant produced peptides as ecofriendly insecticides, and utilising plants as biofactories for recombinant products of value. At QAFFI Dr Jackson works closely with the sugar, citrus and vegetable industries on projects that aim to develop biological solutions to pest and diseases. A rewarding aspect of his career has been in training of research higher degree students.

Dr Kobe's research interests are in protein structure and function, focussing particularly on proteins involved in the processes of infection and immunity.

The primary techniques used in the laboratory are X-ray crystallography and cryo-electron microscopy, combined with a plethora of other molecular biology, biophysical and computational techniques.

Current projects include:

• Structural basis of signalling by cooperative assembly formation (SCAF) in innate immunity and cell-death pathways, in particular Toll-like receptors and interleukin-1 receptors
• Structural basis of plant disease resistance - particularly plant NLRs and the corresponding pathogen effector proteins
• Molecular and structural basis of function of proteins from pathogens (fungal, bacterial and viral pathogens)

Yasmine Lam is a researcher within the Queensland Alliance for Agriculture and Food Innovation at the University of Queensland. Her main areas of interest are using biotehnological tools like gene editing to dissect key traits of interest in cereals to further understand the molecular mechanisms that underpin phenotypes. Currently she is focusses on integrative approaches for leveraging breeding data for biotechnological research and disseminating the influences of genes on various aspects of root system architecture in winter cereals. Overall, she endeavours to form more integrative approaches for crop improvement by looking at ways to harness biotechnlogical tools in a manner that can be utilised not only in crop research, but in crop breeding.

Dr. Guoquan Liu has more than ten years experience in sorghum tissue culture and genetic transformation. He developed a highly efficient sorghum particle transformation system in 2012. Since then, hundreds of transgenic plants have been regenerated from tens of constructs that are invoved in plant disease resistant genes (e.g. Lr34), report gene (gfp), specific-promoters (e.g. alpha- beta- kafirin, A2, LSG), G proteins etc.. He has trained many students how to transform sorghum including honor students, master students, and PhD students.

He has focused on improving sorghum grain yield and grain quality through biotechnologies including genetic transformation, genome-editing, synthetic biology, and plant apomixis.

Professor Lovelock's research focusses on the influence of environmental change, including climate change, on the ecology of coastal and marine plant communities and in providing knowledge to underpin conservation and restoration of these ecosystems now and in the future.

Dr. Melanie Oey is currently Research Officer at the Institute for Molecular Bioscience in the Group of Prof. Ben Hankamer. She was born in Berlin, Germany, and went to the University of Potsdam to study Biochemistry. During her studies she worked at the Max-Planck Institute of Molecular Plant Physiology in Golm, Germany, where she also received her Ph.D. in 2009 for her work on the production of lysin antibiotics in tobacco plants. In the same year she came to Australia to work at the University of Queensland, and has since then developed new technologies which are base for the newly launched "Breakthrough Science Program in Algal Biomedicine" at the Institute for Molecular Bioscience.

Her research interestes are:

- High value product production (e.g. vaccines, antibiotics, pain killer) in Algae via chloroplast and nuclear transformation

- Improvement of bio-hydrogen production from microalgae

- Development of new molecular tools for microalgae

Her work has been funded by the Australian Research Council (ARC), the National Health and Medical Research Council (NHMRC) and the German Academic Exchange Service (DAAD).

Research interest: Monitoring ecosystem health of coral reefs and seagrass habitats, integrating field and remote sensing image datasets, and the developing applied cost-effective mapping and monitoring approaches. Developed approaches have been adopted as standard practice globally, making a difference in conservation of these valuable habitats. The long term monitoring studies at Heron and Moreton Bay formed the basis for the development of mapping and monitoring over time and space at local to global scale. See here major research impact

Major projects:

• Long term monitoring of benthic composition at Heron Reef (2002-ongoing).
• Long term monitoring of seagrass composition and abundance in Moreton bay Marine Park (2000-ongoing).
• Smart Sat CRC Hyperspectral Remote Sensing of Seagrass and Coral Reefs 2023-2027.
• Developement of Underwater Field Spectrometry and Benthic Photo Collection and Analysis
• 3D GBR Habitat Mapping Project 2015 - ongoing:
• Global habitat mapping project 2019-2023 Allen Coral Atlas .

Current position: Associate Professior in Marine Remote Sensing leading the Marine Ecosystem Monitoring Lab. . Academic Director Heron Island Research Station and affiliated researchers with Centre for Marine Science and Centre for Biodiversity and Conservation Science

Capacity Building and Citizen Science: Capacity: under/post graduate courses; Msc/PhD supervision, workshops/courses; Remote Sensing Educational Toolkit, and online courses (e.g. TNC).Strong supporter of citizen science based projects, as trainer, organiser and advisor for Reef Check Australia, CoralWatch, Great Reef Census and UniDive.

Dr Millicent Smith is a Senior Lecturer in Crop Physiology at The University of Queensland. Her research is focused on understanding the physiological mechanisms that underpin yield stability and quality in grain legumes. Millicent works closely with breeders, both in Australia and overseas, to develop improved knowledge on abiotic stress adaptation and tools to accelerate genetic gain. Dr Smith leads a national research project funded by the Grains Research and Development Corporation focused on deploying novel phenotyping and genomics approaches to fast-track the development of new chickpea varieties that display lower yield loss in response to high temperature. Millicent is passionate about training the next generation of plant scientists. She leads a growing research team of postdoctoral scientists, postgraduate and undergraduate research students and has been awarded for her innovative teaching approaches applied to large undergraduate and postgraduate courses.

I completed my Bachelor of Pharmacy at Kings College London, followed by pre-registration and subsequent employment as a pharmacist with Boots the Chemists in Central London. With a PhD in plant biochemistry with Royal Holloway College, University of London, and the Royal Botanic Gardens, Kew, I moved first to Cornell University, USA and then The University of Western Australia for postdoctoral research. I moved to the School of Pharmacy at The University of Queensland in 2007.

Following a number of years in plant research, my current research interests generally link back to plants in some way. Many of my projects develop in response to requests for help from healthcare professionals, and so I have a strong focus on answering clinical questions using pharmaceutical science methods. See my research interests for more information. I am not currently accepting new PhD students as primary supervisor, but am open to contributing as an associate advisor.

I currently teach into the Bachelor of Pharmacy (Honours) in the areas of pharmaceutics, compounding and complementary medicines, and previously have contributed to education in areas of pharmacy practice, clinical trial management, and pharmaceutical chemistry. I have supervised over 30 PhD students to completion, and over 60 undergraduate and masters independent research project students.

My research interests are at the intersection of plant developmental genetics, functional genomics, and molecular and systems biology, following my doctoral and postdoctoral training in the USA. The research effort in my group is focused on harnessing transformative genomics technology to understand the genetics of plant development, and to discover regulatory mechanisms coordinating plant growth and development. We utilize a variety of plant species in our research, from the model plant organism Arabidopsis to grain and horticultural crops like wheat, mango, avocado and macadamia. We employ a range of techniques based on high throughout DNA sequencing to explore gene expression, chromatin accessibility and chromatin modifications from single cell to whole plant levels, bioinformatics and computational biology tools to infer genetic components of gene regulatory networks, as well as gene editing technology to evaluate phenotypic consequences of perturbations in gene regulatory networks.