Overview
Availability
- Dr Thomas Durek is:
- Available for supervision
Fields of research
Qualifications
- Doctor of Philosophy, TU Dortmund University
Works
Search Professor Thomas Durek’s works on UQ eSpace
2025
Journal Article
Asparaginyl Ligases with Engineered Substrate Specificity for Controlled, Sequential Transpeptidation Reactions
Zhou, Yan, de Veer, Simon J., Tyler, Tristan J., Chen, Yufei, Durek, Thomas, Craik, David J. and Rehm, Fabian B. H. (2025). Asparaginyl Ligases with Engineered Substrate Specificity for Controlled, Sequential Transpeptidation Reactions. Journal of the American Chemical Society, 147 (25), 21824-21831. doi: 10.1021/jacs.5c04693
2025
Journal Article
High-throughput enrichment of functional disulfide-rich peptides by droplet microfluidics
Xie, Jing, Yap, Kuok, de Veer, Simon J., Edwardraja, Selvakumar, Durek, Thomas, Trau, Matt, Craik, David J. and Wang, Conan K. (2025). High-throughput enrichment of functional disulfide-rich peptides by droplet microfluidics. Lab on a Chip, 25 (14), 3525-3536. doi: 10.1039/d5lc00261c
2025
Journal Article
Cyclization of the Analgesic α‐Conotoxin Vc1.1 With a Non‐Natural Linker: Effects on Structure, Stability, and Bioactivity
Zhang, Yuhui, Tae, Han Shen, Adams, David J., Durek, Thomas and Craik, David J. (2025). Cyclization of the Analgesic α‐Conotoxin Vc1.1 With a Non‐Natural Linker: Effects on Structure, Stability, and Bioactivity. Journal of Peptide Science, 31 (6) e70017, e70017. doi: 10.1002/psc.70017
2025
Book Chapter
AEP-mediated backbone cyclization of cyclotides—A chemoenzymatic method for cyclotide production
Zhou, Yan, de Veer, Simon J., Durek, Thomas and Craik, David J. (2025). AEP-mediated backbone cyclization of cyclotides—A chemoenzymatic method for cyclotide production. Methods in Enzymology. Academic Press Inc.. doi: 10.1016/bs.mie.2025.09.001
2024
Journal Article
Revealing molecular determinants governing mambalgin-3 pharmacology at acid-sensing ion channel 1 variants
Cristofori-Armstrong, Ben, Budusan, Elena, Smith, Jennifer J., Reynaud, Steve, Voll, Kerstin, Chassagnon, Irène R., Durek, Thomas and Rash, Lachlan D. (2024). Revealing molecular determinants governing mambalgin-3 pharmacology at acid-sensing ion channel 1 variants. Cellular and Molecular Life Sciences, 81 (1) 266, 266. doi: 10.1007/s00018-024-05276-2
2024
Journal Article
Author Correction: Repurposing a plant peptide cyclase for targeted lysine acylation
Rehm, Fabian B. H., Tyler, Tristan J., Zhou, Yan, Huang, Yen-Hua, Wang, Conan K., Lawrence, Nicole, Craik, David J. and Durek, Thomas (2024). Author Correction: Repurposing a plant peptide cyclase for targeted lysine acylation. Nature Chemistry, 16 (9), 1565-1565. doi: 10.1038/s41557-024-01625-7
2024
Journal Article
Repurposing a plant peptide cyclase for targeted lysine acylation
Rehm, Fabian B. H., Tyler, Tristan J., Zhou, Yan, Huang, Yen-Hua, Wang, Conan K., Lawrence, Nicole, Craik, David J. and Durek, Thomas (2024). Repurposing a plant peptide cyclase for targeted lysine acylation. Nature Chemistry, 2024 (9), 1-1. doi: 10.1038/s41557-024-01520-1
2024
Journal Article
Isolation and characterization of insecticidal cyclotides from Viola communis
Khatibi, Negin, Huang, Yen-Hua, Wang, Conan K., Durek, Thomas, Gilding, Edward K. and Craik, David J. (2024). Isolation and characterization of insecticidal cyclotides from Viola communis. Journal of Natural Products, 88 (1), 24-35. doi: 10.1021/acs.jnatprod.4c00168
2024
Journal Article
Chemical synthesis of grafted cyclotides using a “plug and play” approach
Koehbach, Johannes, Muratspahić, Edin, Ahmed, Zakaria M., White, Andrew M., Tomašević, Nataša, Durek, Thomas, Clark, Richard J., Gruber, Christian W. and Craik, David J. (2024). Chemical synthesis of grafted cyclotides using a “plug and play” approach. RSC Chemical Biology, 5 (6), 567-571. doi: 10.1039/d4cb00008k
2024
Journal Article
Nucleation of a key beta-turn promotes cyclotide oxidative folding
Tian, Sixin, de Veer, Simon J., Durek, Thomas, Wang, Conan K. and Craik, David J. (2024). Nucleation of a key beta-turn promotes cyclotide oxidative folding. Journal of Biological Chemistry, 300 (4) 107125, 107125. doi: 10.1016/j.jbc.2024.107125
2024
Journal Article
Tertiary amide bond formation by an engineered asparaginyl ligase
de Veer, Simon J., Zhou, Yan, Durek, Thomas, Craik, David J. and Rehm, Fabian B. H. (2024). Tertiary amide bond formation by an engineered asparaginyl ligase. Chemical Science, 15 (14) 06352, 5248-5255. doi: 10.1039/d3sc06352f
2024
Journal Article
Sortase‐Catalyzed Protein Domain Inversion
Zhou, Yan, Durek, Thomas, Craik, David J. and Rehm, Fabian B. H. (2024). Sortase‐Catalyzed Protein Domain Inversion. Angewandte Chemie, 136 (14) e202316777. doi: 10.1002/ange.202316777
2024
Journal Article
Sortase‐Catalyzed Protein Domain Inversion
Zhou, Yan, Durek, Thomas, Craik, David J. and Rehm, Fabian B. H. (2024). Sortase‐Catalyzed Protein Domain Inversion. Angewandte Chemie International Edition, 63 (14) e202316777, 1-7. doi: 10.1002/anie.202316777
2023
Journal Article
Development of melanocortin 4 receptor agonists by exploiting animal-derived macrocyclic, disulfide-rich peptide scaffolds
Muratspahić, Edin, Aslanoglou, Despoina, White, Andrew M., Draxler, Claudia, Kozisek, Xaver, Farooq, Zara, Craik, David J., McCormick, Peter J., Durek, Thomas and Gruber, Christian W. (2023). Development of melanocortin 4 receptor agonists by exploiting animal-derived macrocyclic, disulfide-rich peptide scaffolds. ACS Pharmacology and Translational Science, 6 (10), 1373-1381. doi: 10.1021/acsptsci.3c00090
2023
Journal Article
A chemoenzymatic approach to produce a cyclic analogue of the analgesic drug MVIIA (Ziconotide)
Zhou, Yan, Harvey, Peta J., Koehbach, Johannes, Chan, Lai Yue, Jones, Alun, Andersson, Åsa, Vetter, Irina, Durek, Thomas and Craik, David J. (2023). A chemoenzymatic approach to produce a cyclic analogue of the analgesic drug MVIIA (Ziconotide). Angewandte Chemie, 135 (29) e202302812, 1-5. doi: 10.1002/ange.202302812
2023
Journal Article
A chemo-enzymatic approach to produce a cyclic analogue of the analgesic drug MVIIA (Ziconotide)
Zhou, Yan, Harvey, Peta J., Koehbach, Johannes, Chan, Lai Yue, Jones, Alun, Andersson, Åsa, Vetter, Irina, Durek, Thomas and Craik, David J. (2023). A chemo-enzymatic approach to produce a cyclic analogue of the analgesic drug MVIIA (Ziconotide). Angewandte Chemie, 62 (29) e202302812, e202302812. doi: 10.1002/anie.202302812
2023
Journal Article
Pain-causing stinging nettle toxins target TMEM233 to modulate NaV1.7 function
Jami, Sina, Deuis, Jennifer R., Klasfauseweh, Tabea, Cheng, Xiaoyang, Kurdyukov, Sergey, Chung, Felicity, Okorokov, Andrei L., Li, Shengnan, Zhang, Jiangtao, Cristofori-Armstrong, Ben, Israel, Mathilde R., Ju, Robert J., Robinson, Samuel D., Zhao, Peng, Ragnarsson, Lotten, Andersson, Åsa, Tran, Poanna, Schendel, Vanessa, McMahon, Kirsten L., Tran, Hue N. T., Chin, Yanni K.-Y., Zhu, Yifei, Liu, Junyu, Crawford, Theo, Purushothamvasan, Saipriyaa, Habib, Abdella M., Andersson, David A., Rash, Lachlan D., Wood, John N. ... Vetter, Irina (2023). Pain-causing stinging nettle toxins target TMEM233 to modulate NaV1.7 function. Nature Communications, 14 (1) 2442. doi: 10.1038/s41467-023-37963-2
2023
Journal Article
Native and engineered cyclic disulfide-rich peptides as drug leads
Tyler, Tristan J., Durek, Thomas and Craik, David J. (2023). Native and engineered cyclic disulfide-rich peptides as drug leads. Molecules, 28 (7) 3189, 1-22. doi: 10.3390/molecules28073189
2022
Journal Article
Engineering the cyclization loop of MCoTI-II generates targeted cyclotides that potently inhibit factor XIIa
Tian, Sixin, Durek, Thomas, Wang, Conan K., Zdenek, Christina N., Fry, Bryan G., Craik, David J. and de Veer, Simon J. (2022). Engineering the cyclization loop of MCoTI-II generates targeted cyclotides that potently inhibit factor XIIa. Journal of Medicinal Chemistry, 65 (23), 15698-15709. doi: 10.1021/acs.jmedchem.2c01080
2022
Journal Article
Late-stage functionalization with cysteine staples generates potent and selective melanocortin receptor-1 agonists
White, Andrew M., Dellsén, Anita, Larsson, Niklas, Kaas, Quentin, Jansen, Frank, Plowright, Alleyn T., Knerr, Laurent, Durek, Thomas and Craik, David J. (2022). Late-stage functionalization with cysteine staples generates potent and selective melanocortin receptor-1 agonists. Journal of Medicinal Chemistry, 65 (19), 12956-12969. doi: 10.1021/acs.jmedchem.2c00793
Funding
Past funding
Supervision
Availability
- Dr Thomas Durek is:
- Available for supervision
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Supervision history
Current supervision
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Doctor Philosophy Selective modification and chemical synthesis of peptides & proteins for drug discovery applicationsPrincipal Advisor Other advisors: Dr Conan Wang, Professor David Craik 
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Doctor Philosophy Development of novel peptide based drug leads for chronic myeloid leukaemiaAssociate Advisor Other advisors: Dr Simon de Veer, Professor David Craik 
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Doctor Philosophy Development of commercially viable cyclic peptide production for the protection of the Great Barrier ReefAssociate Advisor Other advisors: Dr Conan Wang, Professor David Craik, Professor Linda Lua 
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Doctor Philosophy New Toxin Tools for Dissecting PainAssociate Advisor Other advisors: Professor Irina Vetter, Dr Sam Robinson 
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Doctor Philosophy Cracking theta defensin biosynthesisAssociate Advisor Other advisors: Professor David Craik 
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Doctor Philosophy Using plants as factories for producing next generation peptide-based pharmaceuticalsAssociate Advisor Other advisors: Professor David Craik 
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Doctor Philosophy Gut inflammation: model systems and the development of anti-inflammatory peptide drugs.Associate Advisor Other advisors: Professor Jennifer Stow 
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Doctor Philosophy Accessing structurally elusive states of sodium channels as novel analgesic targetsAssociate Advisor Other advisors: Professor Irina Vetter, Professor Mehdi Mobli 
Completed supervision
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2024 Doctor Philosophy Discovery, production, and development of disulfide-rich peptides for drug design and developmentPrincipal Advisor Other advisors: Dr Conan Wang, Professor David Craik 
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2025 Doctor Philosophy Application of transpeptidases for peptide and protein engineeringAssociate Advisor Other advisors: Professor David Craik 
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2024 Doctor Philosophy Molecular tools for peptide and protein engineeringAssociate Advisor Other advisors: Professor David Craik 
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2021 Doctor Philosophy Enzymes that make-or-break peptide bonds in cyclotide biosynthesisAssociate Advisor Other advisors: Professor David Craik 
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2020 Doctor Philosophy The Effect of Naturally Derived Peptides on Animal BehaviourAssociate Advisor Other advisors: Professor David Craik 
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2020 Doctor Philosophy Engineering of Cyclic Disulfide-Rich Peptides for Applications in Drug DesignAssociate Advisor Other advisors: Professor David Craik 
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2019 Doctor Philosophy Elucidating the role of NaV1.6 in peripheral sensory neuronsAssociate Advisor Other advisors: Professor Irina Vetter 
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