Overview
Background
Yosephine Gumulya has a degree in Food Technology (2004) from Bogor Agricultural University (Indonesia) and a Master of Biotechnology (2007) from Technical University Hamburg Harburg (Germany). She completed her PhD in 2010 at Max Planck Institute for Coal Research (Germany), where she learned how to mimic the natural evolution in laboratory and use this technique to generate novel enzymes for biotechnology applications. After spending 1.5 years working for food industry in Spain, in October 2012, she decided to pursue an academic career by doing postdoctoral research in the lab of Prof Elizabeth Gillam and A.Prof. Mikael Boden. Her research has focused on protein engineering and ancestral sequence reconstruction. This knowledge is essential for understanding the protein evolutionary histroy as well for creating robust yet promiscous enzymes for industrial applications.
Availability
- Dr Yosephine Gumulya is:
- Available for supervision
Qualifications
- Doctor of Philosophy of Natural Sciences, Ruhr University Bochum
Research interests
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Protein Engineering / Directed evolution
Mimicking the natural evolution in the laboratory can create biocatalysts with suitable properties for industrial applications (e.g. selectivity, activity, stability)
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Ancestral protein reconstruction
Hypothesising that the Earth was hot in ancient times, resurrecting ancestral proteins in the laboratory can generate robust proteins that useful for industrial applications.
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Simulated Microgravity/Space Technology
Using space-based platforms and extreme microbial biology to inform the design of synthetic biology solutions on Earth and beyond.
Research impacts
A major limitation of industrial process development is the lack of robust enzymes with novel functions or suitable properties for industrial application. With laboratory-based methods (protein engineering and ancestral sequence reconstruction), we have generated stable yet promiscuous enzymes that can be used to generate drug metabolites. As a result, it will significantly speed up the drug development pipeline and, more importantly, reduce the cost of overall drug discovery process.
Works
Search Professor Yosephine Gumulya’s works on UQ eSpace
2008
Journal Article
Improved PCR method for the creation of saturation mutagenesis libraries in directed evolution: application to difficult-to-amplify templates
Sanchis, Joaquin, Fernandez, Layla, Carballeira, J. Daniel, Drone, Jullien, Gumulya, Yosephine, Hoebenreich, Horst, Kahakeaw, Daniel, Kille, Sabrina, Lohmer, Renate, Peyralans, Jerome J. -P., Podtetenieff, John, Prasad, Shreenath, Soni, Pankaj, Taglieber, Andreas, Wu, Sheng, Zilly, Felipe E. and Reetz, Manfred T. (2008). Improved PCR method for the creation of saturation mutagenesis libraries in directed evolution: application to difficult-to-amplify templates. Applied Microbiology and Biotechnology, 81 (2), 387-397. doi: 10.1007/s00253-008-1678-9
Funding
Current funding
Supervision
Availability
- Dr Yosephine Gumulya is:
- Available for supervision
Looking for a supervisor? Read our advice on how to choose a supervisor.
Supervision history
Current supervision
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Doctor Philosophy
Engineering robust microbial hosts for precision fermentation
Principal Advisor
Other advisors: Professor Esteban Marcellin, Professor Mark Turner
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Doctor Philosophy
Engineering robust microbial hosts for precision fermentation
Principal Advisor
Other advisors: Professor Esteban Marcellin, Professor Mark Turner
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Doctor Philosophy
Profitable Upcycling of GM Biomass from Precision Fermentation
Associate Advisor
Other advisors: Professor Esteban Marcellin, Dr Neha Lal
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Doctor Philosophy
Enhancing fermentations by smart starter culture selection
Associate Advisor
Other advisors: Professor Mark Turner
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Master Philosophy
Development of a cooling and antimicrobial coating for common crops
Associate Advisor
Other advisors: Professor Mark Turner, Dr Alberto Baldelli
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Doctor Philosophy
Using synthetic biology to accelerate critical metals recovery from mine waste
Associate Advisor
Other advisors: Professor Esteban Marcellin, Dr Denys Villa Gomez
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Doctor Philosophy
Optimizing Mixed Gas Fermentation for Enhanced Biofuel Production
Associate Advisor
Other advisors: Dr James Heffernan, Dr Lars Puiman, Professor Esteban Marcellin
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Doctor Philosophy
Protein engineering squared: phylogenetics and machine learning for synthetic biology
Associate Advisor
Other advisors: Professor Mikael Boden
Completed supervision
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2025
Doctor Philosophy
Tailoring fermentation cultures for plant-based dairy alternatives
Associate Advisor
Other advisors: Associate Professor Sangeeta Prakash, Professor Mark Turner
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2019
Doctor Philosophy
Computational Modelling of Enzymes: Predicting and Understanding the Selectivity of an Epoxide Hydrolase
Associate Advisor
Other advisors: Professor Mikael Boden
Media
Enquiries
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