Professor

Geoff Faulkner

Email: 
Phone: 
+61 7 334 66300

Availability

Professor Geoff Faulkner is:
Available for supervision

Qualifications

  • Bachelor (Honours) of Science (Advanced), The University of Queensland
  • Doctor of Philosophy, The University of Queensland

Search Professor Geoff Faulkner’s works on UQ eSpace

107 works between 2003 and 2025
All (107) Journal Article (92) Book Chapter (6) Conference Publication (7) Other Outputs (2)

101 - 107 of 107 works

2006

Journal Article

Alternate transcription of the Toll-like receptor signaling cascade

Wells, C. A., Chalk, A. M., Forrest, A., Taylor, D., Waddell, N., Schroder, K., Himes, S. R., Faulkner, G., Lo, S., Kasukawa, T., Kawaji, H., Kai, C., Kawai, J., Katayama, S., Carninci, P., Hayashizaki, Y., Hume, D. A. and Grimmond, S. M. (2006). Alternate transcription of the Toll-like receptor signaling cascade. Genome Biology, 7 (2) R10, R10.1-R10.17. doi: 10.1186/gb-2006-7-2-r10

Alternate transcription of the Toll-like receptor signaling cascade

2006

Journal Article

Genome-wide review of transcriptional complexity in mouse protein kinases and phosphatases

Forrest, Alistair R. R., Taylor, Darrin F., Crowe, Mark L., Chalk, Alistair M., Waddell, Nic J., Kolle, Gabriel, Faulkner, Geoffrey J., Kodzius, Rimantas, Katayama, Shintaro, Wells, Christine, Kai, Chikatoshi, Kawai, Jun, Carninci, Piero, Hayashizaki, Yoshihide and Grimmond, Sean M. (2006). Genome-wide review of transcriptional complexity in mouse protein kinases and phosphatases. Genome Biology, 7 (1) R5, R5.1-R5.15. doi: 10.1186/gb-2006-7-1-r5

Genome-wide review of transcriptional complexity in mouse protein kinases and phosphatases

2005

Journal Article

The transcriptional landscape of the mammalian genome

The FANTOM Consortium, Gough, J., Frith, M. C., Ravasi, T., Wells, C., Forrest, A. R. R., Davis, M. J., Aturaliya, R. N., Bailey, T. L., Crowe, M. L., Faulkner, G., Pang, K. C., Teasdale, R. D., Grimmond, S. M., Mattick, J. S., Hume, D. A. and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Core Team) (2005). The transcriptional landscape of the mammalian genome. Science, 309 (5740), 1559-1563. doi: 10.1126/science.1112014

The transcriptional landscape of the mammalian genome

2004

Journal Article

Bellerophon: a program to detect chimeric sequences in multiple sequence alignments

Huber, T, Faulkner, G and Hugenholtz, P (2004). Bellerophon: a program to detect chimeric sequences in multiple sequence alignments. Bioinformatics, 20 (14), 2317-2319. doi: 10.1093/bioinformatics/bth226

Bellerophon: a program to detect chimeric sequences in multiple sequence alignments

2004

Conference Publication

Novel genes regulated by microphthalmia transcription factor in macrophages and osteoclasts

Meadows, N. A., Faulkner, G., Wells, C., Ravasi, T., Hume, D., Sankar, U., Hu, R., Ostrowski, M. and Cassady, A. (2004). Novel genes regulated by microphthalmia transcription factor in macrophages and osteoclasts. 26th Annual Meeting of the American-Society-for-Bone-and-Mineral-Research, Seattle, WA, United States, 1-5 October 2004. Malden, MA, United States: Wiley-Blackwell. doi: 10.1002/jbmr.5650191306

Novel genes regulated by microphthalmia transcription factor in macrophages and osteoclasts

2003

Journal Article

Genetic control of the innate immune response

Wells, C. A., Ravasi, T., Faulkner, G. J., Carninci, P., Okazaki, Y., Hayashizaki, Y., Sweet, M.J., Wainwright, B. J. and Hume, D. A. (2003). Genetic control of the innate immune response. BMC Immunology, 4 (Article 5) 5, 1-18. doi: 10.1186/1471-2172-4-5

Genetic control of the innate immune response

2003

Journal Article

Continued discovery of transcriptional units expressed in cells of the mouse mononuclear phagocyte lineage

Wells, C. A., Ravasi, T., Sultana, R., Yagi, K., Carninci, P., Bono, H., Faulkner, G. J., Okazaki, Y., Quackenbush, J., Hume, D. A., RIKEN GER Group,, GSL Members, and Lyons, P. A. (2003). Continued discovery of transcriptional units expressed in cells of the mouse mononuclear phagocyte lineage. Genome Research, 13 (6B), 1360-1365. doi: 10.1101/gr.1056103

Continued discovery of transcriptional units expressed in cells of the mouse mononuclear phagocyte lineage

Current funding

  • 2025 - 2028
    The mobile DNA origins of gene regulation
    ARC Discovery Projects
    Open grant
  • 2025 - 2029
    Mobile DNA decides neuronal fate in the normal and degenerative human brain
    NHMRC Investigator Grants
    Open grant
  • 2023 - 2027
    Using complex models of human trophoblast to study placental biology and disease (NHMRC Synergy grant led by University of Adelaide)
    University of Adelaide
    Open grant

Past funding

  • 2021 - 2024
    Long-read genetic and epigenetic profiling in lung cancer for precision medicine
    Priority-driven Collaborative Cancer Research Scheme
    Open grant
  • 2020 - 2024
    Somatic genome mosaicism in human brain function and neurodegeneration
    NHMRC Investigator Grants
    Open grant
  • 2020 - 2023
    Visualising genetic mosaicism during development
    ARC Discovery Projects
    Open grant
  • 2018 - 2020
    Hyperactive mobile DNA in schizophrenia
    NHMRC Project Grant
    Open grant
  • 2017 - 2019
    Does mobile DNA activity contribute to reproductive failure?
    NHMRC Project Grant
    Open grant
  • 2017 - 2019
    Epigenetic signatures of abnormal adult neurogenesis in Rett syndrome
    NHMRC Project Grant
    Open grant
  • 2017 - 2021
    The functional impact of neuronal L1 retrotransposition in learning and neurodegeneration
    CSL Limited
    Open grant
  • 2017 - 2018
    Unlocking the cellular determinants of retrotransposition
    ARC Discovery Projects
    Open grant
  • 2016 - 2018
    Does mobile DNA impact memory formation?
    NHMRC Project Grant
    Open grant
  • 2016 - 2020
    Neuronal genome mosaicism: a molecular component of cognition?
    NHMRC Research Fellowship
    Open grant
  • 2014 - 2017
    Somatic Mutations in Brain in Alzheimer's Disease (NIH Grant administered by the University of Chicago)
    University of Chicago, The
    Open grant
  • 2014 - 2016
    A three-tiered strategy to prevent destabilisation of the induced pluripotent stem cell genome by L1 retrotransposition
    NHMRC Project Grant
    Open grant
  • 2014 - 2016
    Harnessing endogenous L1-mediated mutagenesis to elucidate new candidate genes for liver cancer
    NHMRC Project Grant
    Open grant
  • 2013 - 2015
    Genetic consequences of mobile DNA activation in abnormal neurodevelopment
    NHMRC Project Grant
    Open grant
  • 2013 - 2015
    Mobile DNA as a contributor to human brain cancer
    NHMRC Project Grant
    Open grant
  • 2013 - 2015
    NHMRC Career Development Fellowship (R.D Wright Biomedical CDF Level1): L1 retrotransposition in human development and disease
    NHMRC Career Development Fellowship
    Open grant
  • 2013 - 2016
    Uncovering the impact of tandem repeat variation on both common and syndromic forms of paediatric obesity
    NHMRC Project Grant
    Open grant

Availability

Professor Geoff Faulkner is:
Available for supervision

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Supervision history

Current supervision

  • Doctor Philosophy

    The transposable element regulatory landscape of implantation and trophoblast differentiation

    Principal Advisor

  • Doctor Philosophy

    L1 retrotransposon regulation in the mammalian neuronal lineage

    Principal Advisor

    Other advisors: Dr Sandra Richardson, Dr Gabriela-Oana Bodea

  • Doctor Philosophy

    Visualising genetic mosaicism during development

    Principal Advisor

    Other advisors: Dr Sandra Richardson, Dr Gabriela-Oana Bodea

  • Doctor Philosophy

    Understanding LINE-1 retrotransposon activity in healthy and diseased dopaminergic neurons

    Principal Advisor

    Other advisors: Dr Gabriela-Oana Bodea

  • Doctor Philosophy

    Rewiring transcription in solid tumours by targeting transposable elements

    Principal Advisor

  • Doctor Philosophy

    Understanding LINE-1 retrotransposon activity in healthy and diseased dopaminergic neurons

    Principal Advisor

    Other advisors: Dr Gabriela-Oana Bodea

  • Doctor Philosophy

    Jumping Genes in Mammalian Development

    Associate Advisor

    Other advisors: Dr Sandra Richardson

  • Doctor Philosophy

    Investigations into genetic aberrations underlying recurrent ovarian cancer

    Associate Advisor

  • Doctor Philosophy

    Developing genomic profiling techniques using synthetic DNA methylases

    Associate Advisor

    Other advisors: Associate Professor Seth Cheetham

Completed supervision

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