
Overview
Background
John Upham is a clinical scientist and physician with longstanding research interests in the immunological basis of asthma and chronic lung disease, the role of dendritic cells in allergy and virus infections of the lung, and the development of novel approaches to severe asthma treatment.
John is highly influential in his field, with > 195 publications, > 5,400 citations and an H index of 46. Since 2009, he has 112 publications (1st/senior author on 45%) with a Field-Weighted Citation Impact of 2.03. Moreover, 21.5% of publications are in the top 10% of most-cited publications worldwide (field-weighted). His publications have been cited in >20 different subject areas, demonstrating translation to fields other than Medicine. His research has international reach with citations in 80 countries (Scopus Dec 2018).
In the last 10 years, he has secured over $24 million in research funding. John has been awarded 8 NHMRC Project grants (4 as CIA in the last 5 years), 2 NHMRC CRE (“Closing the gap in Indigenous Lung Health” and “Severe Asthma”), and 1 NHMRC Development Grant. He currently holds NHMRC grants of $7.5 million, including $2.96 million as CIA. John was regularly an invited (9x), plenary (3x) and Chair (9x) at national and international conferences in the last 5 years. In recognition of his international standing and influence in the field, he was elected Fellow of the American Academy of Allergy, Asthma & Immunology (2004) and the Thoracic Society of Australia and New Zealand (2015).
Availability
- Honorary Professor John Upham is:
- Available for supervision
- Media expert
Fields of research
Qualifications
- Doctor of Philosophy, University of Western Australia
Research interests
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Immune function and susceptibility to virus infections in asthma and COPD
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Plasmacytoid dendritic cells
Type I interferon production Immune regulation
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Severe asthma: towards evidence-based assessment and management
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Innate immunity and bacterial infections of the lungs
Bronchiectasis and chronic suppurative lung disease in children Lung health in Indigenous children
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Allergy and immune tolerance
Research impacts
John is currently the President (2021-22) of the Thoracic Society of Australia and Zealand and is a key member of the NHMRC funded Centre of Research Excellence (CRE) in Asthma Treatable Traits. He has played a leadership role in organising and co-chairing three recent national symposia on severe asthma to facilitate research collaboration, build research and clinical capacity, and improve models of care for severe asthma. He has been a member of multiple advisory boards to pharmaceutical companies, both international and national (AstraZeneca, GSK, Novartis, Nycomed, Boehringer-Ingelheim, Mundipharma, Menarini), and has provided advice to the Pharmaceutical Benefits Advisory Committee. His research has provided new treatment options for severe asthma, and guided the appropriate length of antibiotic treatment for Indigenous children with pneumonia, protracted bacterial bronchitis and bronchiectasis. John's research will inform best use of influenza vaccination in COPD, and guide the use of conjugate vaccines to improve immunity to Haemophilus in Indigenous children. He contributed to Clinical Practice Guidelines for the use of omalizumab and mepolizumab in Australia and he was part of the working group that prepared a web-based Severe Asthma Toolkit for the Severe Asthma CRE.
Works
Search Professor John Upham’s works on UQ eSpace
2016
Conference Publication
Aeroallergen-induced IL-33 predisposes to respiratory virus-induced asthma by dampening anti-viral immunity
Lynch, J. P., Werder, R. B., Simpson, J., Upham, J. W. and Phipps, S. (2016). Aeroallergen-induced IL-33 predisposes to respiratory virus-induced asthma by dampening anti-viral immunity. Meeting of the European-Academy-of-Allergy-and-Clinical-Immunology, Vienna Austria, Jun 11-15, 2016. HOBOKEN: WILEY-BLACKWELL.
2016
Conference Publication
Regional variation in allergic sensitivity to subtropical and temperate grass pollen allergens; outcomes of the multicentre cross-sectional Grass Pollen Allergy Survey (GPAS)
Davies, J., Timbrell, V, Reibelt, L., Simmonds, C., Solley, G., Smith, W., Mclean-Tooke, A., van Nunen, S., Smith, P., Upham, J. and Langguth, D. (2016). Regional variation in allergic sensitivity to subtropical and temperate grass pollen allergens; outcomes of the multicentre cross-sectional Grass Pollen Allergy Survey (GPAS). International Congress of Immunology (ICI), Melbourne Australia, Aug 21-26, 2016. HOBOKEN: WILEY-BLACKWELL.
2016
Conference Publication
Plasmacytoid dendritic cell numbers predict individual interferon-alpha production more accurately than TLR7 expression
Murray, L., Ferreira, M. and Upham, J. (2016). Plasmacytoid dendritic cell numbers predict individual interferon-alpha production more accurately than TLR7 expression. International Congress of Immunology (ICI), Melbourne Australia, Aug 21-26, 2016. HOBOKEN: WILEY-BLACKWELL.
2016
Journal Article
Influenza epidemiology, vaccine coverage and vaccine effectiveness in children admitted to sentinel Australian hospitals in 2014: the influenza complications alert network (FluCAN)
Blyth, C. C., Macartney, K. K., Hewagama, S., Senenayake, S., Friedman, N. D., Simpson, G., Upham, J., Kotsimbos, T., Kelly, P. and Cheng, A. C. (2016). Influenza epidemiology, vaccine coverage and vaccine effectiveness in children admitted to sentinel Australian hospitals in 2014: the influenza complications alert network (FluCAN). Eurosurveillance, 21 (30), 25-33. doi: 10.2807/1560-7917.ES.2016.21.30.30301
2016
Journal Article
Identification of STOML2 as a putative novel asthma risk gene associated with IL6R
Revez, J. A., Matheson, M. C., Hui, J., Baltic, S., James, A., Upham, J. W., Dharmage, S., Thompson, P. J., Martin, N. G., Hopper, J. L. and Ferreira, M. A. R. (2016). Identification of STOML2 as a putative novel asthma risk gene associated with IL6R. Allergy, 71 (7), 1020-1030. doi: 10.1111/all.12869
2016
Journal Article
Sex hormones and systemic inflammation are modulators of the obese-asthma phenotype
Scott, H. A., Gibson, P. G., Garg, M. L., Upham, J. W. and Wood, L. G. (2016). Sex hormones and systemic inflammation are modulators of the obese-asthma phenotype. Allergy, 71 (7), 1037-1047. doi: 10.1111/all.12891
2016
Journal Article
Effectiveness and response predictors of omalizumab in a severe allergic asthma population with a high prevalence of comorbidities: the Australian Xolair Registry
Gibson, P. G., Reddel, H., McDonald, V. M., Marks, G., Jenkins, C., Gillman, A., Upham, J., Sutherland, M., Rimmer, J., Thien, F., Katsoulotos, G. P., Cook, M., Yang, I., Katelaris, C., Bowler, S., Langton, D., Robinson, P., Wright, C., Yozghatlian, V., Burgess, S., Sivakumaran, P., Jaffe, A., Bowden, J., Wark, P. A., Yan, K. Y., Kritikos, V., Peters, M., Hew, M., Aminazad, A. ... Guo, M. (2016). Effectiveness and response predictors of omalizumab in a severe allergic asthma population with a high prevalence of comorbidities: the Australian Xolair Registry. Internal Medicine Journal, 46 (9), 1054-1062. doi: 10.1111/imj.13166
2016
Journal Article
Periostin levels and eosinophilic inflammation in poorly-controlled asthma
Simpson, Jodie L., Yang, Ian A., Upham, John W., Reynolds, Paul N., Hodge, Sandra, James, Alan L., Jenkins, Christine, Peters, Matthew J., Jia, Guiquan, Holweg, Cecile T. J. and Gibson, Peter G. (2016). Periostin levels and eosinophilic inflammation in poorly-controlled asthma. BMC Pulmonary Medicine, 16 (1) 67, 67.1-67.7. doi: 10.1186/s12890-016-0230-4
2016
Conference Publication
ABSENCE OF INTERFERON-beta PROMOTOR STIMULATOR-1 (IPS1) INDUCES BRONCHIOLITIS AND AN ASTHMA-LIKE PATHOLOGY IN RESPONSE TO PNEUMOVIRAL INFECTION
Simpson, J., Loh, Z., Zhang, V, Spann, K., Upham, J. and Phipps, S. (2016). ABSENCE OF INTERFERON-beta PROMOTOR STIMULATOR-1 (IPS1) INDUCES BRONCHIOLITIS AND AN ASTHMA-LIKE PATHOLOGY IN RESPONSE TO PNEUMOVIRAL INFECTION. International Congress of Immunology (ICI), Melbourne Australia, Aug 21-26, 2016. HOBOKEN: WILEY-BLACKWELL.
2016
Conference Publication
SEVERE ASTHMA IS ASSOCIATED WITH WORK PRODUCTIVITY LOSS, ACTIVITY IMPAIRMENT AND REDUCED QUALITY OF LIFE
Harvey, E., Gibson, P., Bardin, P., Peters, M., Reynolds, P., Upham, J., Reddel, H., Kritikos, , Katelaris, C., Cochrane, B., Thien, F., Azad, A., Hew, M., Yang, , Brockway, B., Garrett, J., Yap, E., Jones, S., Southcott, A., Jayaram, L., Gillman A, E. G., Uddin, N., Rimmer, J., Katsoulotos, G., Smith, , Jenkins, C., Wark, P. and Mcdonald, (2016). SEVERE ASTHMA IS ASSOCIATED WITH WORK PRODUCTIVITY LOSS, ACTIVITY IMPAIRMENT AND REDUCED QUALITY OF LIFE. HOBOKEN: WILEY-BLACKWELL.
2016
Conference Publication
CLINICAL EFFECTIVENESS OF OMALIZUMAB IN SEVERE ALLERGIC ASTHMA ABOVE THE STANDARD DOSING RANGE: THE AUSTRALIAN XOLAIR REGISTRY
Hew, M., Gillman, A., Sutherland, M., Wark, P., Bowden, J., Macdonald, , Guo, M., Reddel, H., Jenkins, C., Marks, G., Upham, J., Thien, F., Rimmer, J., Katsoulotos, G., Cook, M., Yang, , Katelaris, C., Bowler, S., Langton, D., Gibson, P., Robinson, P., Wright, C., Bint, M., Yozghatlian, V., Burgess, S., Sivakumaran, P., Jaffe, A., Yan, K. Y., Kritikos, V. ... Aminazad, A. (2016). CLINICAL EFFECTIVENESS OF OMALIZUMAB IN SEVERE ALLERGIC ASTHMA ABOVE THE STANDARD DOSING RANGE: THE AUSTRALIAN XOLAIR REGISTRY. HOBOKEN: WILEY-BLACKWELL.
2016
Conference Publication
Anti-Il-33 Partly Ameliorates a Rhinovirus-Induced Exacerbation of Asthma in Predisposed Mice
Werder, R., Zhang, V, Lynch, J., Spann, K., Upham, J. and Phipps, S. (2016). Anti-Il-33 Partly Ameliorates a Rhinovirus-Induced Exacerbation of Asthma in Predisposed Mice. HOBOKEN: WILEY-BLACKWELL.
2016
Conference Publication
EFFECTIVENESS AND RESPONSE PREDICTORS OF OMALIZUMAB IN A SEVERE ALLERGIC ASTHMA POPULATION WITH A HIGH PREVALENCE OF COMORBIDITIES: THE AUSTRALIAN XOLAIR REGISTRY
Gibson, P., Reddel, H., Jenkins, C., Marks, G., Upham, J., Gillman, A., Thien, F., Sutherland, M., Rimmer, J., Katsoulotos, G., Cook, M., Yang, , Katelaris, C., Bowler, S., Langton, D., Robinson, P., Wright, C., Yozghatlian, , Burgess, S., Mcdonald, , Sivakumaran, P., Jaffe, A., Bowden, J., Guo, M., Wark, P., Yan, K. Y., Kritikos, V., Peters, M., Baraket, M. ... Bint, M. (2016). EFFECTIVENESS AND RESPONSE PREDICTORS OF OMALIZUMAB IN A SEVERE ALLERGIC ASTHMA POPULATION WITH A HIGH PREVALENCE OF COMORBIDITIES: THE AUSTRALIAN XOLAIR REGISTRY. HOBOKEN: WILEY-BLACKWELL.
2016
Conference Publication
THE LUNG MICROBIOTA IN STABLE ADULT ASTHMA DIFFERS ACCORDING TO INFLAMMATORY PHENOTYPE
Leong, L., Rogers, G., Gibson, P., Yang, , Reynolds, P., Hodge, S., James, A., Upham, J., Jenkins, C., Peters, M., Marks, G., Baraket, M. and Simpson, J. (2016). THE LUNG MICROBIOTA IN STABLE ADULT ASTHMA DIFFERS ACCORDING TO INFLAMMATORY PHENOTYPE. HOBOKEN: WILEY-BLACKWELL.
2016
Conference Publication
SEX HORMONES AND SYSTEMIC CYTOKINES ARE INDEPENDENT MODULATORS OF THE OBESE-ASTHMA PHENOTYPE
Scott, H., Gibson, P., Grag, M., Upham, J. and Wood, L. (2016). SEX HORMONES AND SYSTEMIC CYTOKINES ARE INDEPENDENT MODULATORS OF THE OBESE-ASTHMA PHENOTYPE. HOBOKEN: WILEY-BLACKWELL.
2016
Journal Article
Combination long acting bronchodilators for COPD
Upham, John W. and Gleeson, Sarah J. (2016). Combination long acting bronchodilators for COPD. Medicine Today, 17 (4), 73-74.
2016
Conference Publication
Sputum Inflammatory Phenotypes in Symptomatic Asthma Around Australia
Simpson, J., Powell, H., Yang, I, Upham, J., Reynolds, P., Hodge, S., James, A., Jenkins, C., Peters, M., Marks, G., Baraket, M. and Gibson, P. (2016). Sputum Inflammatory Phenotypes in Symptomatic Asthma Around Australia. HOBOKEN: WILEY-BLACKWELL.
2016
Conference Publication
CHARACTERISATION OF SEVERE ASTHMA PHENOTYPES VIA A SEVERE ASTHMA REGISTRY: THE SEVERE ASTHMA WEB-BASED DATABASE
Harvey, E., Gibson, P., Bardin, P., Peters, M., Reynolds, P., Upham, J., Reddel, H., Kritikos, , Katelaris, C., Cochrane, B., Thien, F., Azad, A., Hew, M., Yang, , Brockway, B., Garrett, J., Yap, E., Jones, S., Southcott, A., Jayaram, L., Gillman A, E. G., Uddin, N., Rimmer, J., Katsoulotos, G., Smith, , Jenkins, C., Wark, P. and Mcdonald, (2016). CHARACTERISATION OF SEVERE ASTHMA PHENOTYPES VIA A SEVERE ASTHMA REGISTRY: THE SEVERE ASTHMA WEB-BASED DATABASE. HOBOKEN: WILEY-BLACKWELL.
2016
Journal Article
Vitamin D in asthma: is the golden bullet losing its luster?
Upham, John W. and Sly, Peter D. (2016). Vitamin D in asthma: is the golden bullet losing its luster?. American Journal of Respiratory and Critical Care Medicine, 193 (6), 598-600. doi: 10.1164/rccm.201511-2213ED
2016
Journal Article
Protracted bacterial bronchitis: the last decade and the road ahead
Chang, Anne B., Upham, John W., Masters, I. Brent, Redding, Gregory R., Gibson, Peter G., Marchant, Julie M. and Grimwood, Keith (2016). Protracted bacterial bronchitis: the last decade and the road ahead. Pediatric Pulmonology, 51 (3), 225-242. doi: 10.1002/ppul.23351
Funding
Past funding
Supervision
Availability
- Honorary Professor John Upham is:
- Available for supervision
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Available projects
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Immune dysregulation in asthma and host defence against respiratory viruses
Our program of translational research is focussed on the study of immune function and dysfunction in asthma, and host defence against respiratory viruses, especially human rhinoviruses. We are interested in the mechanisms leading to excessive airway inflammation in asthma, and why people with asthma are unusually susceptible to asthma attacks during respiratory viral infections. Our aim is to discover new therapeutic targets in severe asthma.
Research Projects
- The function of key immune cells such as antigen presenting cells and NK cells
- The role of polarizing cytokines such as IL-33, IL-25 and TSLP in altering host defence against viruses.
- How macrolide antibiotics alter immune function
Supervision history
Current supervision
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Doctor Philosophy
Transmission dynamics of multi-drug resistant tuberculosis amongst immune suppressed patients exposed to an infectious case
Associate Advisor
Other advisors: Professor Antje Blumenthal, Professor Rachel Thomson
Completed supervision
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2023
Doctor Philosophy
Advancing management of pulmonary thromboembolic disease: from acute pulmonary embolism to pulmonary hypertension
Principal Advisor
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2023
Doctor Philosophy
Using proteomics to understand and prevent asthma exacerbations with macrolide antibiotics
Principal Advisor
Other advisors: Professor Ian Yang
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2021
Doctor Philosophy
Role of Regulatory T cells in modulating antiviral immune responses to rhinovirus: relevance to asthma
Principal Advisor
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2019
Doctor Philosophy
The impact of asthma, toll-like receptors 7 and 8, genetic and clinical determinants on antiviral immune response
Principal Advisor
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2020
Doctor Philosophy
The influence of maternal diet on microbiome assembly and severity of viral bronchiolitis in the offspring
Associate Advisor
Other advisors: Associate Professor Paul Dennis
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2019
Doctor Philosophy
The role of necroptosis in the development of severe bronchiolitis and subsequent asthma
Associate Advisor
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2018
Doctor Philosophy
The role of the interleukin-6 pathway in asthma
Associate Advisor
Other advisors: Professor Nick Martin
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2017
Doctor Philosophy
A critical contribution of the airway epithelium to the pathogenesis of viral bronchiolitis and asthma
Associate Advisor
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2016
Doctor Philosophy
The role of interferon regulatory factor 3 and 7 in virus-induced bronchiolitis and the onset of asthma.
Associate Advisor
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2016
Doctor Philosophy
Understanding the cellular and molecular processes that link RAGE gene-deletion with the development of pneumovirus-induced bronchiolitis and paucigranulocytic asthma
Associate Advisor
Other advisors: Professor Peter Sly
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2015
Doctor Philosophy
Chronic wet cough in children and further exploration of protracted bacterial bronchitis
Associate Advisor
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2015
Doctor Philosophy
The plasmacytoid dendritic cell: a cell at the cross-roads in asthma
Associate Advisor
Media
Enquiries
Contact Honorary Professor John Upham directly for media enquiries about:
- Allergies
- Asthma
- Chronic obstructive pulmonary disease
- Dendritic cells
- Immunity
- Lung infections
- Lungs - virus infections
- Virus infections of the lung
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