
Overview
Background
John Upham is a clinical scientist and physician with longstanding research interests in the immunological basis of asthma and chronic lung disease, the role of dendritic cells in allergy and virus infections of the lung, and the development of novel approaches to severe asthma treatment.
John is highly influential in his field, with > 195 publications, > 5,400 citations and an H index of 46. Since 2009, he has 112 publications (1st/senior author on 45%) with a Field-Weighted Citation Impact of 2.03. Moreover, 21.5% of publications are in the top 10% of most-cited publications worldwide (field-weighted). His publications have been cited in >20 different subject areas, demonstrating translation to fields other than Medicine. His research has international reach with citations in 80 countries (Scopus Dec 2018).
In the last 10 years, he has secured over $24 million in research funding. John has been awarded 8 NHMRC Project grants (4 as CIA in the last 5 years), 2 NHMRC CRE (“Closing the gap in Indigenous Lung Health” and “Severe Asthma”), and 1 NHMRC Development Grant. He currently holds NHMRC grants of $7.5 million, including $2.96 million as CIA. John was regularly an invited (9x), plenary (3x) and Chair (9x) at national and international conferences in the last 5 years. In recognition of his international standing and influence in the field, he was elected Fellow of the American Academy of Allergy, Asthma & Immunology (2004) and the Thoracic Society of Australia and New Zealand (2015).
Availability
- Honorary Professor John Upham is:
- Available for supervision
- Media expert
Fields of research
Qualifications
- Doctor of Philosophy, University of Western Australia
Research interests
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Immune function and susceptibility to virus infections in asthma and COPD
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Plasmacytoid dendritic cells
Type I interferon production Immune regulation
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Severe asthma: towards evidence-based assessment and management
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Innate immunity and bacterial infections of the lungs
Bronchiectasis and chronic suppurative lung disease in children Lung health in Indigenous children
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Allergy and immune tolerance
Research impacts
John is currently the President (2021-22) of the Thoracic Society of Australia and Zealand and is a key member of the NHMRC funded Centre of Research Excellence (CRE) in Asthma Treatable Traits. He has played a leadership role in organising and co-chairing three recent national symposia on severe asthma to facilitate research collaboration, build research and clinical capacity, and improve models of care for severe asthma. He has been a member of multiple advisory boards to pharmaceutical companies, both international and national (AstraZeneca, GSK, Novartis, Nycomed, Boehringer-Ingelheim, Mundipharma, Menarini), and has provided advice to the Pharmaceutical Benefits Advisory Committee. His research has provided new treatment options for severe asthma, and guided the appropriate length of antibiotic treatment for Indigenous children with pneumonia, protracted bacterial bronchitis and bronchiectasis. John's research will inform best use of influenza vaccination in COPD, and guide the use of conjugate vaccines to improve immunity to Haemophilus in Indigenous children. He contributed to Clinical Practice Guidelines for the use of omalizumab and mepolizumab in Australia and he was part of the working group that prepared a web-based Severe Asthma Toolkit for the Severe Asthma CRE.
Works
Search Professor John Upham’s works on UQ eSpace
2015
Journal Article
Increased peripheral blood pro-inflammatory/cytotoxic lymphocytes in children with bronchiectasis
Hodge, G., Upham, J. W., Chang, A. B., Baines, K. J., Yerkovich, S. T., Pizzutto, S. J. and Hodge, S. (2015). Increased peripheral blood pro-inflammatory/cytotoxic lymphocytes in children with bronchiectasis. PLoS One, 10 (8) e0133695, e0133695. doi: 10.1371/journal.pone.0133695
2015
Journal Article
High pulmonary levels of IL-6 and IL-1β in children with chronic suppurative lung disease are associated with low systemic IFN-γ production in response to non-typeable Haemophilus influenzae
Pizzutto, Susan J., Upham, John W., Yerkovich, Stephanie T. and Chang, Anne B. (2015). High pulmonary levels of IL-6 and IL-1β in children with chronic suppurative lung disease are associated with low systemic IFN-γ production in response to non-typeable Haemophilus influenzae. PLoS One, 10 (6) e0129517, e0129517-e0129517. doi: 10.1371/journal.pone.0129517
2015
Journal Article
Acute exercise is associated with reduced exhaled nitric oxide in physically inactive adults with asthma
Scott, Hayley A., Latham, Jennifer R., Callister, Robin, Pretto, Jeffrey J., Baines, Katherine, Saltos, Nick, Upham, John W. and Wood, Lisa G. (2015). Acute exercise is associated with reduced exhaled nitric oxide in physically inactive adults with asthma. Annals of Allergy, Asthma and Immunology, 114 (6), 470-479. doi: 10.1016/j.anai.2015.04.002
2015
Journal Article
Glycopyrronium once-daily significantly improves lung function and health status when combined with salmeterol/fluticasone in patients with COPD: The GLISTEN study - a randomised controlled trial
Frith, Peter A., Thompson, Philip J., Ratnavadivel, Rajeev, Chang, Catherina L., Bremner, Peter, Day, Peter, Frenzel, Christina, Kurstjens, Nicol, Waddell, Ainslie, Daniel, Alexander, Khoussousi, Alireza, Springfield, Andrew, Veale, Andrew, Graham, Anthony Neil, Gallagher, Brad, Pande, Braj Raj, O'Kane, Brendan, Jones, Christopher, Baldi, Claudio, Helm, Colin, O'Dochartaigh, Conor, Chambers, Daniel, Quinn, Dean, Yull, Derek, Karthigesu, Dhanalakshi, Then, Edward, Graham, Frank, Faigenbaum, Fred, Geddam, Geetha ... Hess, Zofia (2015). Glycopyrronium once-daily significantly improves lung function and health status when combined with salmeterol/fluticasone in patients with COPD: The GLISTEN study - a randomised controlled trial. Thorax, 70 (6), 519-527. doi: 10.1136/thoraxjnl-2014-206670
2015
Conference Publication
HIGH PULMONARY EXPRESSION OF IL-6 AND IL-1BETA IN CHILDREN WITH SUPPURATIVE LUNG DISEASE IS ASSOCIATED WITH IMPAIRED RECALL RESPONSES TO H. INFLUENZAE
Pizzutto, S. J., Upham, J. W., Yerkovich, S. T. and Chang, A. B. (2015). HIGH PULMONARY EXPRESSION OF IL-6 AND IL-1BETA IN CHILDREN WITH SUPPURATIVE LUNG DISEASE IS ASSOCIATED WITH IMPAIRED RECALL RESPONSES TO H. INFLUENZAE. HOBOKEN: WILEY-BLACKWELL.
2015
Journal Article
IgE+ B cells are scarce, but allergen-specific B cells with a memory phenotype circulate in patients with allergic rhinitis
Wong, K.J, Timbrell, Victoria L., Xi, Y, Upham, J.W, Collins, A.M and Davies, J.M (2015). IgE+ B cells are scarce, but allergen-specific B cells with a memory phenotype circulate in patients with allergic rhinitis. Allergy: European Journal of Allergy and Clinical Immunology, 70 (4), 420-428. doi: 10.1111/all.12563
2015
Conference Publication
Immune Responses to Nontypeable Haemophilus Influenzae in Protracted Bacterial Bronchitis
Upham, J., Chen, A., Carroll, M., Petsky, H., Pizzutto, S., Yerkovich, S., Baines, K., Simpson, J., Gibson, P., Hodge, G., Hodge, S. and Chang, A. (2015). Immune Responses to Nontypeable Haemophilus Influenzae in Protracted Bacterial Bronchitis. Thoracic Society Australia New Zealand Australian New Zealand Society Respiratory Science Annual Scientific Meeting 2015, Queensland Australia, Mar 27-Apr 01, 2015. HOBOKEN: WILEY-BLACKWELL.
2015
Conference Publication
Sputum and Serum Periostin Levels Are Associated With, But Do Not Predict Sputum Eosinophil Proportion in Severe Asthma
Simpson, J., Yang, I. A., Upham, J. W., Reynolds, P. N., Hodge, S., James, A. L., Jenkins, C., Peters, M. J., Jia, G., Holweg, C. T. J. and Gibson, P. G. (2015). Sputum and Serum Periostin Levels Are Associated With, But Do Not Predict Sputum Eosinophil Proportion in Severe Asthma. Thoracic Society Australia New Zealand Australian New Zealand Society Respiratory Science Annual Scientific Meeting 2015, Queensland Australia, Mar 27-Apr 01, 2015. HOBOKEN: WILEY-BLACKWELL.
2015
Conference Publication
AEROALLERGEN-INDUCED IL-33 PREDISPOSES TO RESPIRATORY VIRUS-INDUCED ASTHMA BY DAMPENING TYPE I AND III INTERFERON PRODUCTION
Werder, R., Lynch, J., Simpson, J., Loh, Z., Zhang, , Spann, K., Sly, P., Mazzone, S., Upham, J. and Phipps, S. (2015). AEROALLERGEN-INDUCED IL-33 PREDISPOSES TO RESPIRATORY VIRUS-INDUCED ASTHMA BY DAMPENING TYPE I AND III INTERFERON PRODUCTION. Thoracic Society Australia New Zealand Australian New Zealand Society Respiratory Science Annual Scientific Meeting 2015, Queensland Australia, Mar 27-Apr 01, 2015. HOBOKEN: WILEY-BLACKWELL.
2015
Conference Publication
PDC EXPANSION OF NTREG LIMITS SEVERE PNEUMOVIRUS-INDUCED BRONCHIOLITIS AND ATTENUATES THE ONSET OF VIRUS-PROVOKED ASTHMA
Lynch, J., Rogers, M., Lane, K., Werder, R., Loh, Z., Diener, K., Hayball, J., Hill, G., Haque, A., Spann, K., Mazzone, S., Upham, J. and Phipps, S. (2015). PDC EXPANSION OF NTREG LIMITS SEVERE PNEUMOVIRUS-INDUCED BRONCHIOLITIS AND ATTENUATES THE ONSET OF VIRUS-PROVOKED ASTHMA. Thoracic Society Australia New Zealand Australian New Zealand Society Respiratory Science Annual Scientific Meeting 2015, Queensland Australia, Mar 27-Apr 01, 2015. HOBOKEN: WILEY-BLACKWELL.
2015
Conference Publication
A Multicentre Cross-Sectional Survey of Allergic Sensitisation to Subtropical and Temperate Grass Pollens
Davies, Janet M., Solley, Graham O., Smith, William B., McLean-Tooke, Andrew, van Nunen, Sheryl A., Smith, Peter Kenneth, Timbrell, Victoria L., Upham, John W. and Langguth, Daman (2015). A Multicentre Cross-Sectional Survey of Allergic Sensitisation to Subtropical and Temperate Grass Pollens. Annual Meeting of the American-Academy-of-Allergy-Asthma-and-Immunology (AAAAI), Houston Tx, Feb 20-24, 2015. NEW YORK: MOSBY-ELSEVIER. doi: 10.1016/j.jaci.2014.12.1396
2015
Journal Article
Improving immunity to Haemophilus influenzae in children with chronic suppurative lung disease
Pizzutto, Susan J., Yerkovich, Stephanie T., Upham, John W., Hales, Belinda J., Thomas, Wayne R. and Chang, Anne B. (2015). Improving immunity to Haemophilus influenzae in children with chronic suppurative lung disease. Vaccine, 33 (2), 321-326. doi: 10.1016/j.vaccine.2014.11.024
2015
Journal Article
Anti-inflammatory deficiencies in neutrophilic asthma: reduced galectin-3 and IL-1RA/IL-1 beta
Gao, Peng, Gibson, Peter G., Baines, Katherine J., Yang, Ian A., Upham, John W., Reynolds, Paul N., Hodge, Sandra, James, Alan L., Jenkins, Christine, Peters, Matthew J., Zhang, Jie and Simpson, Jodie L. (2015). Anti-inflammatory deficiencies in neutrophilic asthma: reduced galectin-3 and IL-1RA/IL-1 beta. Respiratory Research, 16 (5) 5, 5. doi: 10.1189/s12931-014-0163-5
2015
Journal Article
PBB: definition, mechanisms, and treatment
Chang, Anne B., Grimwood, Keith, Gibson, Peter G. and Upham, John W. (2015). PBB: definition, mechanisms, and treatment. The Lancet Respiratory Medicine, 3 (10), 743-744. doi: 10.1016/S2213-2600(15)00243-X
2015
Conference Publication
Sputum And Serum Periostin Levels Are Associated With, But Do Not Predict Sputum Eosinophil Proportion In Severe Asthma
Simpson, J., Yang, I. A., Upham, J. W., Reynolds, P. N., Hodge, S., James, A. L., Jenkins, C. R., Peters, M. J., Jia, G., Holweg, C. T. and Gibson, P. G. (2015). Sputum And Serum Periostin Levels Are Associated With, But Do Not Predict Sputum Eosinophil Proportion In Severe Asthma. International Conference of the American-Thoracic-Society (ATS), Denver Co, May 15-20, 2015. NEW YORK: AMER THORACIC SOC.
2015
Conference Publication
Protracted Bacterial Bronchitis (PBB) in children: natural history and risk factors for bronchiectasis
Wurzel, D., Marchant, J., Yerkovich, S., Upham, J., Petsky, H. and Chang, A. (2015). Protracted Bacterial Bronchitis (PBB) in children: natural history and risk factors for bronchiectasis. Thoracic Society Australia New Zealand Australian New Zealand Society Respiratory Science Annual Scientific Meeting 2015, QLD, Australia, 27 March – 1 April 2015. doi: 10.1111/resp.12494
2015
Journal Article
Toward making inroads in reducing the disparity of lung health in Australian Indigenous and New Zealand Maori children
Chang, Anne B., Marsh, Robyn L., Upham, John W., Hoffman, Lucas R., Smith-Vaughan, Heidi, Holt, Deborah, Toombs, Maree, Byrnes, Catherine, Yerkovich, Stephanie T., Torzillo, Paul J., O'Grady, Kerry-Ann F. and Grimwood, Keith (2015). Toward making inroads in reducing the disparity of lung health in Australian Indigenous and New Zealand Maori children. Frontiers in Pediatrics, 3 (FEB) 9, 9. doi: 10.3389/fped.2015.00009
2015
Conference Publication
Interferon Regulatory Factor 7 Protects Against Pneumovirus-Induced Airway Smooth Muscle Growth in Early Life
Loh, Z., Ullah, A., Zhang, V., Lynch, J., Werder, R., Simpson, J., Upham, J., Mazzone, S., Spann, K. and Phipps, S. (2015). Interferon Regulatory Factor 7 Protects Against Pneumovirus-Induced Airway Smooth Muscle Growth in Early Life. TSANZ 2015 Annual Scientific Meeting, Gold Coast, QLD Australia, 28 March - 1 April 2015. Richmond, VIC Australia: Wiley-Blackwell Publishing Asia. doi: 10.1111/resp.12494_7
2015
Conference Publication
Interleukin-33 augments rhinovirus-induced type 2 immune responses in people with asthma, but not in healthy donors
Upham, John, Landgraf, Megan and Xi, Camilla (2015). Interleukin-33 augments rhinovirus-induced type 2 immune responses in people with asthma, but not in healthy donors. Lausanne, Switzerland: European Respiratory Society. doi: 10.1183/13993003.congress-2015.pa4369
2015
Conference Publication
Immune Responses To Non-Typeable Haemophilus Influenzae In Protracted Bacterial Bronchitis
Upham, J. W., Chang, A., Pizzutto, S., Carroll, M., Gibson, P., Simpson, J., Baines, K. J., Petsky, H., Yerkovich, S. and Chen, A. (2015). Immune Responses To Non-Typeable Haemophilus Influenzae In Protracted Bacterial Bronchitis. International Conference of the American-Thoracic-Society (ATS), Denver Co, May 15-20, 2015. NEW YORK: AMER THORACIC SOC.
Funding
Past funding
Supervision
Availability
- Honorary Professor John Upham is:
- Available for supervision
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Available projects
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Immune dysregulation in asthma and host defence against respiratory viruses
Our program of translational research is focussed on the study of immune function and dysfunction in asthma, and host defence against respiratory viruses, especially human rhinoviruses. We are interested in the mechanisms leading to excessive airway inflammation in asthma, and why people with asthma are unusually susceptible to asthma attacks during respiratory viral infections. Our aim is to discover new therapeutic targets in severe asthma.
Research Projects
- The function of key immune cells such as antigen presenting cells and NK cells
- The role of polarizing cytokines such as IL-33, IL-25 and TSLP in altering host defence against viruses.
- How macrolide antibiotics alter immune function
Supervision history
Current supervision
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Doctor Philosophy
Transmission dynamics of multi-drug resistant tuberculosis amongst immune suppressed patients exposed to an infectious case
Associate Advisor
Other advisors: Professor Antje Blumenthal, Professor Rachel Thomson
Completed supervision
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2023
Doctor Philosophy
Advancing management of pulmonary thromboembolic disease: from acute pulmonary embolism to pulmonary hypertension
Principal Advisor
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2023
Doctor Philosophy
Using proteomics to understand and prevent asthma exacerbations with macrolide antibiotics
Principal Advisor
Other advisors: Professor Ian Yang
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2021
Doctor Philosophy
Role of Regulatory T cells in modulating antiviral immune responses to rhinovirus: relevance to asthma
Principal Advisor
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2019
Doctor Philosophy
The impact of asthma, toll-like receptors 7 and 8, genetic and clinical determinants on antiviral immune response
Principal Advisor
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2020
Doctor Philosophy
The influence of maternal diet on microbiome assembly and severity of viral bronchiolitis in the offspring
Associate Advisor
Other advisors: Associate Professor Paul Dennis
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2019
Doctor Philosophy
The role of necroptosis in the development of severe bronchiolitis and subsequent asthma
Associate Advisor
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2018
Doctor Philosophy
The role of the interleukin-6 pathway in asthma
Associate Advisor
Other advisors: Professor Nick Martin
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2017
Doctor Philosophy
A critical contribution of the airway epithelium to the pathogenesis of viral bronchiolitis and asthma
Associate Advisor
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2016
Doctor Philosophy
The role of interferon regulatory factor 3 and 7 in virus-induced bronchiolitis and the onset of asthma.
Associate Advisor
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2016
Doctor Philosophy
Understanding the cellular and molecular processes that link RAGE gene-deletion with the development of pneumovirus-induced bronchiolitis and paucigranulocytic asthma
Associate Advisor
Other advisors: Professor Peter Sly
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2015
Doctor Philosophy
The plasmacytoid dendritic cell: a cell at the cross-roads in asthma
Associate Advisor
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2015
Doctor Philosophy
Chronic wet cough in children and further exploration of protracted bacterial bronchitis
Associate Advisor
Media
Enquiries
Contact Honorary Professor John Upham directly for media enquiries about:
- Allergies
- Asthma
- Chronic obstructive pulmonary disease
- Dendritic cells
- Immunity
- Lung infections
- Lungs - virus infections
- Virus infections of the lung
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