Overview
Availability
- Dr Elizabeth Ross is:
- Not available for supervision
Fields of research
Qualifications
- Doctor of Philosophy, La Trobe University
Research interests
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Metagenomics and the Microbiome
Since my PhD I have been interested in the microbiome and it's links to host variation. Using it in a predictive way to help agriculture become more environmentally friendly while increasing our ability to feed the world means that we can have our beef, and eat it too.
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The mammalian genome and its genes
New technology is allowing us to look at things that were invisible just a few years before. Applying new technology to understand similarities and differences between individual genomes allows us to look at aspects of the genome and its genes at a scale never before possible.
Works
Search Professor Elizabeth Ross’s works on UQ eSpace
2021
Journal Article
Evolution of tissue and developmental specificity of transcription start sites in Bos taurus indicus
Forutan, Mehrnush, Ross, Elizabeth, Chamberlain, Amanda J., Nguyen, Loan, Mason, Brett, Moore, Stephen, Garner, Josie B., Xiang, Ruidong and Hayes, Ben J. (2021). Evolution of tissue and developmental specificity of transcription start sites in Bos taurus indicus. Communications Biology, 4 (1) 829, 1-14. doi: 10.1038/s42003-021-02340-6
2021
Journal Article
Variants at the ASIP locus contribute to coat color darkening in Nellore cattle
Trigo, Beatriz B., Utsunomiya, Adam T. H., Fortunato, Alvaro A. A. D., Milanesi, Marco, Torrecilha, Rafaela B. P., Lamb, Harrison, Nguyen, Loan, Ross, Elizabeth M., Hayes, Ben, Padula, Romulo C. M., Sussai, Thayla S., Zavarez, Ludmilla B., Cipriano, Rafael S., Caminhas, Maria M. T., Lopes, Flavia L., Pelle, Cassiano, Leeb, Tosso, Bannasch, Danika, Bickhart, Derek, Smith, Timothy P. L., Sonstegard, Tad S., Garcia, Jose F. and Utsunomiya, Yuri T. (2021). Variants at the ASIP locus contribute to coat color darkening in Nellore cattle. Genetics Selection Evolution, 53 (1) 40, 40. doi: 10.1186/s12711-021-00633-2
2021
Journal Article
Improved genomic prediction of clonal performance in sugarcane by exploiting non-additive genetic effects
Yadav, Seema, Wei, Xianming, Joyce, Priya, Atkin, Felicity, Deomano, Emily, Sun, Yue, Nguyen, Loan T., Ross, Elizabeth M., Cavallaro, Tony, Aitken, Karen S., Hayes, Ben J. and Voss-Fels, Kai P. (2021). Improved genomic prediction of clonal performance in sugarcane by exploiting non-additive genetic effects. Theoretical and Applied Genetics, 134 (7), 2235-2252. doi: 10.1007/s00122-021-03822-1
2021
Journal Article
Accuracy of genomic prediction of complex traits in sugarcane
Hayes, Ben J., Wei, Xianming, Joyce, Priya, Atkin, Felicity, Deomano, Emily, Yue, Jenny, Nguyen, Loan, Ross, Elizabeth M., Cavallaro, Tony, Aitken, Karen S. and Voss-Fels, Kai P. (2021). Accuracy of genomic prediction of complex traits in sugarcane. Theoretical and Applied Genetics, 134 (5), 1455-1462. doi: 10.1007/s00122-021-03782-6
2021
Journal Article
Strategies and considerations for implementing genomic selection to improve traits with additive and non-additive genetic architectures in sugarcane breeding
Voss-Fels, Kai P., Wei, Xianming, Ross, Elizabeth M., Frisch, Matthias, Aitken, Karen S., Cooper, Mark and Hayes, Ben J. (2021). Strategies and considerations for implementing genomic selection to improve traits with additive and non-additive genetic architectures in sugarcane breeding. Theoretical and Applied Genetics, 134 (5), 1493-1511. doi: 10.1007/s00122-021-03785-3
2021
Conference Publication
Investigating host biomarkers associated with cattle tick resistance
Mantilla Valdivieso, E., Ross, E., Hayes, B., Jonsson, N., James, P. and Tabor, A. (2021). Investigating host biomarkers associated with cattle tick resistance. 33rd Biennial Conference of the Australian Association of Animal Sciences, Fremantle, WA, Australia and online, 1-3 February 2020. Toowong, QLD, Australia: Australian Association of Animal Sciences.
2021
Conference Publication
Effect of bovine reference genome choice in RNA-SEQ alignment and differential gene expression analysis in Brangus cattle
Mantilla Valdivieso, E., Ross, E., Raza, A., Hayes, B., Jonsson, N., James, P. and Tabor, A. (2021). Effect of bovine reference genome choice in RNA-SEQ alignment and differential gene expression analysis in Brangus cattle. 24th Association for the Advancement of Animal Breeding and Genetics Conference, On-line with local hubs in Australia, 2-4 November 2021. Armidale, NSW, Australia: Association for the Advancement of Animal Breeding and Genetics.
2021
Conference Publication
Factors affecting fertility in northern Australian beef herds
Copley, J., Engle, B., Ross, E., Landmark, S., Fordyce, G., Burns, B. and Hayes, B. (2021). Factors affecting fertility in northern Australian beef herds. 33rd Biennial Conference of the Australian Association of Animal Sciences, Fremantle, WA, Australia and online, 1-3 February 2020. Toowong, QLD, Australia: Australian Association of Animal Sciences.
2020
Journal Article
The future of livestock management: a review of real-time portable sequencing applied to livestock
Lamb, Harrison J., Hayes, Ben J., Nguyen, Loan T. and Ross, Elizabeth M. (2020). The future of livestock management: a review of real-time portable sequencing applied to livestock. Genes, 11 (12) 1478, 1-27. doi: 10.3390/genes11121478
2020
Journal Article
Genomic predictions for enteric methane production are improved by metabolome and microbiome data in sheep (Ovis aries)
Ross, Elizabeth M., Hayes, Ben J., Tucker, David, Bond, Jude, Denman, Stuart E. and Oddy, Victor Hutton (2020). Genomic predictions for enteric methane production are improved by metabolome and microbiome data in sheep (Ovis aries). Journal of Animal Science, 98 (10) skaa262. doi: 10.1093/jas/skaa262
2020
Journal Article
Use of whole-genome sequence data and novel genomic selection strategies to improve selection for age at puberty in tropically-adapted beef heifers
Warburton, Christie L., Engle, Bailey N., Ross, Elizabeth M., Costilla, Roy, Moore, Stephen S., Corbet, Nicholas J., Allen, Jack M., Laing, Alan R., Fordyce, Geoffry, Lyons, Russell E., McGowan, Michael R., Burns, Brian M. and Hayes, Ben J. (2020). Use of whole-genome sequence data and novel genomic selection strategies to improve selection for age at puberty in tropically-adapted beef heifers. Genetics Selection Evolution, 52 (1) 28, 28. doi: 10.1186/s12711-020-00547-5
2020
Journal Article
Characterization of the poll allele in Brahman cattle using long-read Oxford Nanopore sequencing
Lamb, Harrison J., Ross, Elizabeth M., Nguyen, Loan T., Lyons, Russell E., Moore, Stephen S. and Hayes, Ben J. (2020). Characterization of the poll allele in Brahman cattle using long-read Oxford Nanopore sequencing. Journal of Animal Science, 98 (5) skaa127, skaa127. doi: 10.1093/jas/skaa127
2020
Journal Article
Accelerating genetic gain in sugarcane breeding using genomic selection
Yadav, Seema, Jackson, Phillip, Wei, Xianming, Ross, Elizabeth M., Aitken, Karen, Deomano, Emily, Atkin, Felicity, Hayes, Ben J. and Voss-Fels, Kai P. (2020). Accelerating genetic gain in sugarcane breeding using genomic selection. Agronomy, 10 (4) 585, 1-21. doi: 10.3390/agronomy10040585
2019
Journal Article
Breeding improves wheat productivity under contrasting agrochemical input levels
Voss-Fels, Kai P., Stahl, Andreas, Wittkop, Benjamin, Lichthardt, Carolin, Nagler, Sabrina, Rose, Till, Chen, Tsu-Wei, Zetzsche, Holger, Seddig, Sylvia, Majid Baig, Mirza, Ballvora, Agim, Frisch, Matthias, Ross, Elizabeth, Hayes, Ben J., Hayden, Matthew J., Ordon, Frank, Leon, Jens, Kage, Henning, Friedt, Wolfgang, Stützel, Hartmut and Snowdon, Rod J. (2019). Breeding improves wheat productivity under contrasting agrochemical input levels. Nature Plants, 5 (7), 706-714. doi: 10.1038/s41477-019-0445-5
2019
Other Outputs
Northern Beef Genomics Databank
Ross, Elizabeth (2019). Northern Beef Genomics Databank. The University of Queensland. (Dataset) doi: 10.48610/4f0cc6f
2016
Journal Article
The complete mitochondrial genome of Haliotis laevigata ( Gastropoda: Haliotidae) using MiSeq and HiSeq sequencing
Robinson, Nick A., Hall, Nathan E., Ross, Elizabeth M., Cooke, Ira R., Shiel, Brett P., Robinson, Andrew J. and Strugnell, Jan M. (2016). The complete mitochondrial genome of Haliotis laevigata ( Gastropoda: Haliotidae) using MiSeq and HiSeq sequencing. Mitochondrial DNA: Part A, 27 (1), 437-438. doi: 10.3109/19401736.2014.900611
2015
Journal Article
Exploiting the intrinsic microbial degradative potential for field-based in situ dechlorination of trichloroethene contaminated groundwater
Adetutu, Eric M., Gundry, Taylor D., Patil, Sayali S., Golneshin, Aida, Adigun, Joy, Bhaskarla, Vijay, Aleer, Samuel, Shahsavari, Esmaeil, Ross, Elizabeth and Ball, Andrew S. (2015). Exploiting the intrinsic microbial degradative potential for field-based in situ dechlorination of trichloroethene contaminated groundwater. Journal of Hazardous Materials, 300, 48-57. doi: 10.1016/j.jhazmat.2015.06.055
2013
Journal Article
Metagenomics of rumen bacteriophage from thirteen lactating dairy cattle
Ross, Elizabeth M., Petrovski, Steve, Moate, Peter J. and Hayes, Ben J. (2013). Metagenomics of rumen bacteriophage from thirteen lactating dairy cattle. BMC Microbiology, 13. doi: 10.1186/1471-2180-13-242
2013
Journal Article
Metagenomic predictions: from microbiome to complex health and environmental phenotypes in humans and cattle
Ross, Elizabeth M., Moate, Peter J., Marett, Leah C., Cocks, Ben G. and Hayes, Ben J. (2013). Metagenomic predictions: from microbiome to complex health and environmental phenotypes in humans and cattle. PLoS One, 8 (9) e73056, e73056. doi: 10.1371/journal.pone.0073056
2013
Journal Article
Investigating the effect of two methane-mitigating diets on the rumen microbiome using massively parallel sequencing
Ross, E. M., Moate, P. J., Marett, L., Cocks, B. G. and Hayes, B. J. (2013). Investigating the effect of two methane-mitigating diets on the rumen microbiome using massively parallel sequencing. Journal of Dairy Science, 96 (9), 6030-6046. doi: 10.3168/jds.2013-6766
Supervision
Availability
- Dr Elizabeth Ross is:
- Not available for supervision
Supervision history
Current supervision
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Doctor Philosophy
Understanding the genomic variation of methane producing ruminants
Principal Advisor
Other advisors: Dr Loan Nguyen
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Doctor Philosophy
Unravelling the genomic and epigenetic complexity of the rumen microbiome
Principal Advisor
Other advisors: Dr Chian Teng Ong
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Master Philosophy
Structural variation in the mammalian genome
Principal Advisor
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Doctor Philosophy
Cattle Pregnancy and Methane Emissions
Associate Advisor
Other advisors: Associate Professor Marloes Nitert Dekker, Associate Professor Marina Fortes
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Doctor Philosophy
Global Genomic Prediction in Apple
Associate Advisor
Other advisors: Dr Kai Voss-Fels, Associate Professor Craig Hardner
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Doctor Philosophy
New mate allocation strategies to accelerate genetic gain in agricultural species.
Associate Advisor
Other advisors: Dr Eric Dinglasan, Dr Owen Powell, Professor Ben Hayes
Completed supervision
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2023
Doctor Philosophy
On-farm genotyping to accelerate genetic gain in Australia's northern beef industry
Principal Advisor
Other advisors: Professor Ben Hayes
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2024
Doctor Philosophy
Genotype by environment interaction for beef cattle fertility traits in northern Australia
Associate Advisor
Other advisors: Dr Ben Wood, Professor Ben Hayes
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2023
Doctor Philosophy
A transcriptomic-based comparison of host leukocyte and skin responses to cattle tick infestation in Brangus steers
Associate Advisor
Other advisors: Professor Ben Hayes, Professor Ala Tabor
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2023
Doctor Philosophy
Optimising Genomic Selection for Sugarcane
Associate Advisor
Other advisors: Professor Lee Hickey, Dr Kai Voss-Fels, Dr Owen Powell, Professor Ben Hayes
Media
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